Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P01_F_M02
(603 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad... 33 0.002
AJ876407-1|CAI45288.1| 590|Tribolium castaneum phosphatase prot... 25 0.37
AY316682-1|AAQ83696.1| 456|Tribolium castaneum Sp-like zinc fin... 24 1.1
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ... 21 6.1
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ... 21 6.1
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ... 21 6.1
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ... 21 6.1
AM292336-1|CAL23148.2| 455|Tribolium castaneum gustatory recept... 21 6.1
>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
adhesion molecule splicevariant 3.12.3.1 protein.
Length = 1639
Score = 32.7 bits (71), Expect = 0.002
Identities = 36/164 (21%), Positives = 62/164 (37%), Gaps = 10/164 (6%)
Frame = +2
Query: 53 PLGEVAGLKERYELQNKGLTFQIKGRSNEDDYGNYTCGLKNQTGHIKAWM---VTGNVHA 223
P+ ++ LK+ + + + +I+ ED G Y C ++N +A + G
Sbjct: 355 PIKTISWLKDGHPIDHNEAVLRIESVRKEDK-GMYQCFIRNDQESAEATAELKLGGRFEP 413
Query: 224 KMTKDA----NVVEGQNIKITCKLIGKPYSEVTWKYKKDELDNGTDVSAVLGSRVQLEKN 391
+ A V G ++ + C G P E+TW+ L N +G V + +
Sbjct: 414 PQIRHAFNEETVQPGNSVFLKCIASGNPTPEITWELYGRRLSNSE--RNQIGQYVTVNGD 471
Query: 392 EQGLDNTVLVLQNAERADAGLYQC---SPAGGTPADVTLRVKGV 514
N + N D GLY+C S G + V G+
Sbjct: 472 VVSHLNITAIHTN----DGGLYRCVASSKVGSADHSARINVYGL 511
Score = 30.7 bits (66), Expect = 0.010
Identities = 26/112 (23%), Positives = 45/112 (40%), Gaps = 4/112 (3%)
Frame = +2
Query: 140 DDYGNYTCGLKNQTG---HIKAWMVTGNVHAKMTKDANVVEGQNIKITCKLIGKPYSEVT 310
+D G Y C ++ G H V G + + +V G + + C G P V
Sbjct: 484 NDGGLYRCVASSKVGSADHSARINVYGLPFVRSMEKQAIVAGGTLIVHCPFAGHPVDSVV 543
Query: 311 WKYKKDELDNGTDVSAVLGSRVQLEKNEQGLDNTVLVLQNAERA-DAGLYQC 463
W ++D G ++ + + ++ N L+++N ERA D Y C
Sbjct: 544 W--ERD------------GRQLPINRKQKVFINGTLIIENVERASDQATYDC 581
Score = 30.3 bits (65), Expect = 0.013
Identities = 18/75 (24%), Positives = 32/75 (42%), Gaps = 4/75 (5%)
Frame = +2
Query: 140 DDYGNYTCGLKNQTG--HIKAWM-VTGNVHAKMTKDANVVE-GQNIKITCKLIGKPYSEV 307
+D G Y C + N G ++ + VT + AK+ ++ G+ TC G P +
Sbjct: 300 EDSGKYLCVVNNSVGGESVETVLTVTAPLKAKIEPQVQTIDFGRPATFTCNFEGNPIKTI 359
Query: 308 TWKYKKDELDNGTDV 352
+W +D+ V
Sbjct: 360 SWLKDGHPIDHNEAV 374
Score = 30.3 bits (65), Expect = 0.013
Identities = 29/117 (24%), Positives = 46/117 (39%), Gaps = 7/117 (5%)
Frame = +2
Query: 149 GNYTCGLKNQTGHIKAWMVTG--NVHAKMT---KDANVVEGQNIKITCKLIGKPYSEVTW 313
GNYTC L + + + + + NV + D +G + + CK G P VTW
Sbjct: 674 GNYTC-LASNSASVTTYTTSLFINVPPRWILEPTDKAFAQGSDAAVECKADGFPRPVVTW 732
Query: 314 KYKKDELDNGTDVSAVLGSRVQLEKNEQGL--DNTVLVLQNAERADAGLYQCSPAGG 478
K T VS G + N + ++ L + N ++ + G Y C G
Sbjct: 733 K-------RATGVSP--GDYKDFKPNNPDIKVEDGTLTINNIQKTNEGYYLCEAVNG 780
>AJ876407-1|CAI45288.1| 590|Tribolium castaneum phosphatase
protein.
Length = 590
Score = 25.4 bits (53), Expect = 0.37
Identities = 17/48 (35%), Positives = 23/48 (47%)
Frame = -1
Query: 360 TALTSVPLSNSSFLYFHVTSEYGLPINLQVILMFCPSTTLASLVILAC 217
+AL SV + S L H T E+ LP+ L + CP L + L C
Sbjct: 345 SALASVIMGLSPILGRHNTIEHLLPLFLTQLKDECPEVRLNIISNLDC 392
>AY316682-1|AAQ83696.1| 456|Tribolium castaneum Sp-like zinc finger
protein protein.
Length = 456
Score = 23.8 bits (49), Expect = 1.1
Identities = 19/63 (30%), Positives = 30/63 (47%), Gaps = 10/63 (15%)
Frame = -1
Query: 450 PASARSAFCSTSTVLSRPCSFFSSCTRLPSTA----------LTSVPLSNSSFLYFHVTS 301
P+S + STS S +SC+ +P+TA TS P +++S ++ H TS
Sbjct: 81 PSSLPTQRTSTSNPTYSSRSVMTSCSSVPTTASYGSDLYFPGATSQPPTDNSHVHHHQTS 140
Query: 300 EYG 292
G
Sbjct: 141 LLG 143
>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
variant 2 protein.
Length = 1558
Score = 21.4 bits (43), Expect = 6.1
Identities = 9/23 (39%), Positives = 12/23 (52%)
Frame = -3
Query: 565 EHHDLRADAEEGPERVVHALDPE 497
+HH L A EEG + + D E
Sbjct: 1174 DHHHLGAVTEEGGDESANETDSE 1196
>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
variant 1 protein.
Length = 1558
Score = 21.4 bits (43), Expect = 6.1
Identities = 9/23 (39%), Positives = 12/23 (52%)
Frame = -3
Query: 565 EHHDLRADAEEGPERVVHALDPE 497
+HH L A EEG + + D E
Sbjct: 1174 DHHHLGAVTEEGGDESANETDSE 1196
>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase CHS1B
protein.
Length = 1558
Score = 21.4 bits (43), Expect = 6.1
Identities = 9/23 (39%), Positives = 12/23 (52%)
Frame = -3
Query: 565 EHHDLRADAEEGPERVVHALDPE 497
+HH L A EEG + + D E
Sbjct: 1174 DHHHLGAVTEEGGDESANETDSE 1196
>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase CHS1A
protein.
Length = 1558
Score = 21.4 bits (43), Expect = 6.1
Identities = 9/23 (39%), Positives = 12/23 (52%)
Frame = -3
Query: 565 EHHDLRADAEEGPERVVHALDPE 497
+HH L A EEG + + D E
Sbjct: 1174 DHHHLGAVTEEGGDESANETDSE 1196
>AM292336-1|CAL23148.2| 455|Tribolium castaneum gustatory receptor
candidate 15 protein.
Length = 455
Score = 21.4 bits (43), Expect = 6.1
Identities = 18/49 (36%), Positives = 23/49 (46%), Gaps = 8/49 (16%)
Frame = -1
Query: 411 VLSRPCSFFSSCTRL------PSTAL--TSVPLSNSSFLYFHVTSEYGL 289
+L R S F SCTRL PS + + +P+ N F VT E L
Sbjct: 398 ILLRFLSVFESCTRLNNESRKPSFVIQFSHIPVDNIEFAGALVTYELTL 446
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 103,284
Number of Sequences: 336
Number of extensions: 2107
Number of successful extensions: 12
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15248386
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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