Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P01_F_M01
         (729 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

10_08_0338 + 16916429-16916650,16916728-16917900                       29   2.9  
06_01_1011 + 7879283-7879885,7880057-7880962,7881274-7882515           29   2.9  
10_08_0078 + 14699588-14700645,14700739-14700874,14701076-14701096     29   3.8  
09_02_0082 - 4060018-4061604                                           29   5.0  
02_05_1273 + 35381626-35382486,35382567-35382691,35384851-353854...    29   5.0  

>10_08_0338 + 16916429-16916650,16916728-16917900
          Length = 464

 Score = 29.5 bits (63), Expect = 2.9
 Identities = 11/20 (55%), Positives = 13/20 (65%)
 Frame = +3

Query: 315 TSHGAWSPGYGGYASDAHYG 374
           T +G+   GYGGY  DA YG
Sbjct: 366 TGYGSQGYGYGGYGGDASYG 385


>06_01_1011 + 7879283-7879885,7880057-7880962,7881274-7882515
          Length = 916

 Score = 29.5 bits (63), Expect = 2.9
 Identities = 10/19 (52%), Positives = 13/19 (68%)
 Frame = +3

Query: 333 SPGYGGYASDAHYGAPAAG 389
           S GYGGY +D H+G   +G
Sbjct: 33  SSGYGGYGTDIHFGGGGSG 51


>10_08_0078 + 14699588-14700645,14700739-14700874,14701076-14701096
          Length = 404

 Score = 29.1 bits (62), Expect = 3.8
 Identities = 12/37 (32%), Positives = 20/37 (54%)
 Frame = +1

Query: 31  WLQTLVA*AKISWRVLAIQQRPASSFXXSEKLKFTTN 141
           W   +V    +SW VL++  R A  +  S  +KFT++
Sbjct: 356 WRLAVVHPVSVSWLVLSLSGRAAEVYDLSNSMKFTSH 392


>09_02_0082 - 4060018-4061604
          Length = 528

 Score = 28.7 bits (61), Expect = 5.0
 Identities = 12/28 (42%), Positives = 14/28 (50%)
 Frame = +1

Query: 535 PTHPSRTPQLPSPTVPVTLLVTANGLVP 618
           P  P  TP +PSPTVP   +  A    P
Sbjct: 425 PAPPVPTPSMPSPTVPAPPVTAAPATAP 452


>02_05_1273 +
           35381626-35382486,35382567-35382691,35384851-35385450,
           35385550-35385841,35386199-35386364,35386664-35386707,
           35386866-35386979,35387171-35387290,35387541-35387626,
           35388340-35388502
          Length = 856

 Score = 28.7 bits (61), Expect = 5.0
 Identities = 12/20 (60%), Positives = 13/20 (65%)
 Frame = +1

Query: 535 PTHPSRTPQLPSPTVPVTLL 594
           PT P   PQ PSPT P +LL
Sbjct: 121 PTAPPPRPQAPSPTAPPSLL 140


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,742,224
Number of Sequences: 37544
Number of extensions: 231188
Number of successful extensions: 779
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 735
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 776
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1909952136
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)