Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P01_F_L24
(670 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_51267| Best HMM Match : Thiolase_N (HMM E-Value=2.2e-35) 167 7e-42
SB_12473| Best HMM Match : No HMM Matches (HMM E-Value=.) 144 4e-35
SB_30176| Best HMM Match : No HMM Matches (HMM E-Value=.) 91 1e-20
SB_25136| Best HMM Match : Thiolase_N (HMM E-Value=4.4e-09) 55 6e-08
SB_44112| Best HMM Match : PA14 (HMM E-Value=5e-05) 30 2.0
SB_8022| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.4
SB_38435| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.4
SB_42687| Best HMM Match : UPF0262 (HMM E-Value=2.1) 28 6.0
SB_33413| Best HMM Match : DUF81 (HMM E-Value=0.31) 28 6.0
SB_7259| Best HMM Match : ResIII (HMM E-Value=0.21) 28 6.0
SB_50233| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.0
SB_27146| Best HMM Match : LIM (HMM E-Value=9.7) 28 6.0
SB_21674| Best HMM Match : LIM (HMM E-Value=0.44) 28 6.0
SB_55131| Best HMM Match : fn3 (HMM E-Value=0.0083) 28 7.9
SB_46599| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.9
SB_53084| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.9
>SB_51267| Best HMM Match : Thiolase_N (HMM E-Value=2.2e-35)
Length = 415
Score = 167 bits (406), Expect = 7e-42
Identities = 78/137 (56%), Positives = 98/137 (71%), Gaps = 1/137 (0%)
Frame = +2
Query: 263 GNCAENTAKKLQITRQDQDEYAVNSYKRSAAAYEAKAFVDELVPVPVPQKRGAP-VIFAE 439
G CAEN A K ITR++QD+YA++SY+R+AAA++A F E+VPV +PQK+G P ++F E
Sbjct: 59 GVCAENAASKYNITREEQDDYAIHSYRRTAAAWDAGKFKQEVVPVNIPQKKGKPDIVFEE 118
Query: 440 DEEYKRVNFEKFTKLSTVFQKENGTVTAGNASTLNDGXXXXXXXXXXXXKRLNVKPIARI 619
DEEYK+V+FEKF L TVF+KENGTVTA NASTLNDG ++ V P+A I
Sbjct: 119 DEEYKKVSFEKFPSLKTVFKKENGTVTAANASTLNDGAAAVVLMTREAAEKNGVTPLASI 178
Query: 620 VGFADGECDPIDFPIXP 670
V FAD PIDFPI P
Sbjct: 179 VAFADAAVAPIDFPIAP 195
Score = 50.4 bits (115), Expect = 1e-06
Identities = 23/35 (65%), Positives = 26/35 (74%)
Frame = +2
Query: 20 LPKSPXCPTVNKVCASGMKSIMLAAQGLQTGAQXI 124
LP S C T+NKVCASGMKSIM AAQ L G+Q +
Sbjct: 26 LPISTPCTTINKVCASGMKSIMAAAQSLMCGSQGV 60
>SB_12473| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 387
Score = 144 bits (350), Expect = 4e-35
Identities = 79/218 (36%), Positives = 115/218 (52%), Gaps = 2/218 (0%)
Frame = +2
Query: 2 AVIFAGLPKSPXCPTVNKVCASGMKSIMLAAQGLQTGAQXIILAGGMESMSNVPFYLK-R 178
A I AG+P VN +C SG+K++ L Q + G I++AGG ESMS P R
Sbjct: 75 AAIHAGIPACVPAYGVNMLCGSGLKAVALGYQAVAMGDSNIVVAGGQESMSQAPHCCHMR 134
Query: 179 GETSYGGMQLVDGIVFDGLTDVYNKFHMGNCAENTAKKLQITRQDQDEYAVNSYKRSAAA 358
+G M L+D ++ DGL D +N +HMG AEN AK+ +++R++QD +A+ S +R+ A
Sbjct: 135 PALKFGDMTLIDTMLKDGLMDSFNNYHMGITAENVAKQWEVSREEQDNFALTSQQRTETA 194
Query: 359 YEAKAFVDELVPVPVPQKRGAPVIFAEDEEYKRVNFEKFTKLSTVFQKE-NGTVTAGNAS 535
+A F DE+V V + + G + ++ E KL F + GTV+AGN S
Sbjct: 195 QKAGYFSDEIVTVSIKTRAGLTEVNSDQFPRHGCTIEGLRKLKPCFLFDGKGTVSAGNTS 254
Query: 536 TLNDGXXXXXXXXXXXXKRLNVKPIARIVGFADGECDP 649
LNDG NV P+AR+V +A DP
Sbjct: 255 GLNDGAAVVVLMPYAEANARNVSPLARVVSWAQAGVDP 292
>SB_30176| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1012
Score = 91.5 bits (217), Expect(2) = 1e-20
Identities = 55/114 (48%), Positives = 74/114 (64%), Gaps = 1/114 (0%)
Frame = +2
Query: 197 GMQLVDGIVFDGLTDVYNKFHMGNCAENTAKKLQITRQDQDEYAVNSYKRSAAAYEAKAF 376
G Q+ D + + GLTD+ MG AEN A+K ITR++ D++A+ S +R AAA+E+ AF
Sbjct: 799 GAQMEDTL-WQGLTDMLPGLPMGITAENLAEKYNITREECDQFALLSQQRWAAAHESGAF 857
Query: 377 VDELVPVPVPQKRGAPVIFAEDEEYK-RVNFEKFTKLSTVFQKENGTVTAGNAS 535
E+VPVPV K+G P FA DE + E+ KL VF K+NGTV+AGNAS
Sbjct: 858 TAEIVPVPVKGKKG-PEQFAVDEHPRPETTIEQLAKLPAVF-KKNGTVSAGNAS 909
Score = 26.2 bits (55), Expect(2) = 1e-20
Identities = 11/26 (42%), Positives = 17/26 (65%)
Frame = +2
Query: 20 LPKSPXCPTVNKVCASGMKSIMLAAQ 97
+P + TVN++C SG +SI+ AQ
Sbjct: 776 VPVTTPALTVNRLCGSGFQSIISGAQ 801
>SB_25136| Best HMM Match : Thiolase_N (HMM E-Value=4.4e-09)
Length = 162
Score = 54.8 bits (126), Expect = 6e-08
Identities = 34/118 (28%), Positives = 55/118 (46%)
Frame = +2
Query: 260 MGNCAENTAKKLQITRQDQDEYAVNSYKRSAAAYEAKAFVDELVPVPVPQKRGAPVIFAE 439
MG+ A+ A ++RQ+QDEYA+ S+ + A +A D ++ VP G + +
Sbjct: 13 MGHSADRLASAFHVSRQEQDEYALRSHTLAHQATQAGKLTD-VLSYQVP---GTTTVLSA 68
Query: 440 DEEYKRVNFEKFTKLSTVFQKENGTVTAGNASTLNDGXXXXXXXXXXXXKRLNVKPIA 613
D + ++ KL F + GT+TA N+S L DG + +KP A
Sbjct: 69 DNGIRVSTPQQMAKLKPAFIRPFGTITAANSSFLTDGASACLVMCEEKALSMGLKPKA 126
>SB_44112| Best HMM Match : PA14 (HMM E-Value=5e-05)
Length = 1433
Score = 29.9 bits (64), Expect = 2.0
Identities = 24/79 (30%), Positives = 36/79 (45%), Gaps = 7/79 (8%)
Frame = +2
Query: 212 DGIVFDGLTDVYNKFHMGNCAENTAKKLQITRQDQDEYAVNSYKRSAAAYE-------AK 370
DG+VFD ++ + M C+ N K + +Q E+ +Y R +A A
Sbjct: 1214 DGVVFDAAIELAHPSDMWVCSTN--KMGALVQQRLIEHHRKNYPRLSATIRFDPDPSVAH 1271
Query: 371 AFVDELVPVPVPQKRGAPV 427
+ + PVPVP KRG V
Sbjct: 1272 RYRKQERPVPVPGKRGEKV 1290
>SB_8022| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 386
Score = 29.1 bits (62), Expect = 3.4
Identities = 15/47 (31%), Positives = 21/47 (44%)
Frame = +2
Query: 341 KRSAAAYEAKAFVDELVPVPVPQKRGAPVIFAEDEEYKRVNFEKFTK 481
KR + A+ ELV V P + + A+ EYKR N +K
Sbjct: 117 KRQKVKHRAQYIFKELVNVAEPHSKNTGTVLAQCPEYKRKNSSPSSK 163
>SB_38435| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 101
Score = 29.1 bits (62), Expect = 3.4
Identities = 15/47 (31%), Positives = 21/47 (44%)
Frame = +2
Query: 341 KRSAAAYEAKAFVDELVPVPVPQKRGAPVIFAEDEEYKRVNFEKFTK 481
KR + A+ ELV V P + + A+ EYKR N +K
Sbjct: 28 KRQKVKHRAQYIFKELVNVAEPHSKNTGTVLAQCPEYKRKNSSPSSK 74
>SB_42687| Best HMM Match : UPF0262 (HMM E-Value=2.1)
Length = 908
Score = 28.3 bits (60), Expect = 6.0
Identities = 23/80 (28%), Positives = 34/80 (42%), Gaps = 7/80 (8%)
Frame = +2
Query: 212 DGIVFDGLTDVYNKFHMGNCAENTAKKLQITRQDQDEYAVNSYKRSAAAYE-------AK 370
DG+ FD + + +M C+ N L +Q E+ +Y R A A
Sbjct: 564 DGVAFDAAIEQAHSSYMWVCSTNKIGAL--VQQRLIEHHRKNYPRLPATIRFDPDPSVAH 621
Query: 371 AFVDELVPVPVPQKRGAPVI 430
+ + PVPVP KRG V+
Sbjct: 622 CYRKQGRPVPVPGKRGEKVV 641
>SB_33413| Best HMM Match : DUF81 (HMM E-Value=0.31)
Length = 455
Score = 28.3 bits (60), Expect = 6.0
Identities = 10/29 (34%), Positives = 18/29 (62%)
Frame = -1
Query: 487 RQFCKLFKINSFILFIFSKYYRSPSFLWN 401
R CK++K ++LF+FS + + +WN
Sbjct: 23 RVTCKVYKRRWYVLFVFSAAAMTSNVMWN 51
>SB_7259| Best HMM Match : ResIII (HMM E-Value=0.21)
Length = 956
Score = 28.3 bits (60), Expect = 6.0
Identities = 24/79 (30%), Positives = 34/79 (43%), Gaps = 7/79 (8%)
Frame = +2
Query: 212 DGIVFDGLTDVYNKFHMGNCAENTAKKLQITRQDQDEYAVNSYKRSAAAYE-------AK 370
DG+ FD + D + M C+ N K + +Q E+ +Y R A A
Sbjct: 735 DGVAFDAVIDQAHPSDMWVCSTN--KMGALVQQRLVEHHRKNYPRLPATIRFDPDPSVAH 792
Query: 371 AFVDELVPVPVPQKRGAPV 427
+ + PVPVP KRG V
Sbjct: 793 RYRKQGRPVPVPGKRGEKV 811
>SB_50233| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 967
Score = 28.3 bits (60), Expect = 6.0
Identities = 24/79 (30%), Positives = 34/79 (43%), Gaps = 7/79 (8%)
Frame = +2
Query: 212 DGIVFDGLTDVYNKFHMGNCAENTAKKLQITRQDQDEYAVNSYKRSAAAYE-------AK 370
DG+ FD + + M C+ N K + +Q E+ +Y R A A
Sbjct: 707 DGVAFDAAIEQAHPSDMWVCSTN--KMGALVQQQLVEHHRKNYPRLPAIIRFDPDPSVAH 764
Query: 371 AFVDELVPVPVPQKRGAPV 427
+ + PVPVP KRGA V
Sbjct: 765 RYRKQGRPVPVPGKRGAKV 783
>SB_27146| Best HMM Match : LIM (HMM E-Value=9.7)
Length = 296
Score = 28.3 bits (60), Expect = 6.0
Identities = 24/79 (30%), Positives = 34/79 (43%), Gaps = 7/79 (8%)
Frame = +2
Query: 212 DGIVFDGLTDVYNKFHMGNCAENTAKKLQITRQDQDEYAVNSYKRSAAAYE-------AK 370
DG+ FD + D + M C+ N K + +Q E+ +Y R A A
Sbjct: 102 DGVAFDAVIDQAHPSDMWVCSTN--KMGALVQQRLVEHHRKNYPRLPATIRFDPDPSVAH 159
Query: 371 AFVDELVPVPVPQKRGAPV 427
+ + PVPVP KRG V
Sbjct: 160 RYRKQGRPVPVPGKRGEKV 178
>SB_21674| Best HMM Match : LIM (HMM E-Value=0.44)
Length = 885
Score = 28.3 bits (60), Expect = 6.0
Identities = 23/79 (29%), Positives = 34/79 (43%), Gaps = 7/79 (8%)
Frame = +2
Query: 212 DGIVFDGLTDVYNKFHMGNCAENTAKKLQITRQDQDEYAVNSYKRSAAAYE-------AK 370
DG+ FD + ++ M C+ N K + +Q E+ + Y R A A
Sbjct: 664 DGVAFDAAIEQAHRSDMWVCSTN--KMGALVQQRLVEHHMKKYPRLPATIRFDPDPSVAH 721
Query: 371 AFVDELVPVPVPQKRGAPV 427
+ + PVPVP KRG V
Sbjct: 722 RYRKQGRPVPVPGKRGEKV 740
>SB_55131| Best HMM Match : fn3 (HMM E-Value=0.0083)
Length = 1266
Score = 27.9 bits (59), Expect = 7.9
Identities = 11/21 (52%), Positives = 16/21 (76%)
Frame = -2
Query: 240 SVSPSNTIPSTNCIPPYEVSP 178
+++PSNT+P TNC P E +P
Sbjct: 928 ALNPSNTVP-TNCCPSGETTP 947
>SB_46599| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 4482
Score = 27.9 bits (59), Expect = 7.9
Identities = 31/109 (28%), Positives = 43/109 (39%), Gaps = 7/109 (6%)
Frame = +2
Query: 212 DGIVFDGLTDVYNKFHMGNCAENTAKKLQITRQDQDEYAVNSYKRSAAAYE-------AK 370
DG+ FD + M C+ N K + RQ E+ +Y R A A
Sbjct: 4297 DGVAFDAAIEQARPSDMWVCSTN--KMGALVRQRLVEHHRKNYPRLPATIRFDPDPSVAY 4354
Query: 371 AFVDELVPVPVPQKRGAPVIFAEDEEYKRVNFEKFTKLSTVFQKENGTV 517
+ + PVPVP KRG V + YK N K+ TV + T+
Sbjct: 4355 RYRKQGRPVPVPGKRGEKV-----DAYK--NTSKYAGWGTVHRVHGDTI 4396
>SB_53084| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 936
Score = 27.9 bits (59), Expect = 7.9
Identities = 19/54 (35%), Positives = 25/54 (46%), Gaps = 1/54 (1%)
Frame = -1
Query: 205 LHSSIRSFTSLQIKRYI*HRFHPTSKYYXLGSSL*TL-CCQHYRFHARGTXFVY 47
+H S+ +FT+L I R+ + L S L L Q Y FHAR F Y
Sbjct: 763 IHESVATFTALMIARHC-FSLEDVIYHVALPSLLAALPSVQLYGFHARSAIFRY 815
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,437,445
Number of Sequences: 59808
Number of extensions: 348412
Number of successful extensions: 1085
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 988
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1072
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1729817375
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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