Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P01_F_L24
(670 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U41105-4|AAA82397.2| 407|Caenorhabditis elegans 3-ketoacyl-coa ... 251 3e-67
U41105-5|AAA82398.1| 390|Caenorhabditis elegans Hypothetical pr... 184 7e-47
Z81546-11|CAB04455.2| 394|Caenorhabditis elegans Hypothetical p... 141 4e-34
U41105-8|AAA82403.1| 460|Caenorhabditis elegans Hypothetical pr... 87 8e-18
M77697-2|AAA27897.2| 448|Caenorhabditis elegans Hypothetical pr... 75 6e-14
AF098499-2|AAC67396.1| 155|Caenorhabditis elegans Hypothetical ... 29 2.3
U41534-11|AAM22028.1| 686|Caenorhabditis elegans Hypothetical p... 29 3.0
Z36948-4|CAA85411.3| 615|Caenorhabditis elegans Hypothetical pr... 28 5.2
Z81545-10|CAB04448.1| 170|Caenorhabditis elegans Hypothetical p... 28 6.9
U23170-3|AAC46700.2| 125|Caenorhabditis elegans Hypothetical pr... 28 6.9
AL031627-25|CAA20971.1| 170|Caenorhabditis elegans Hypothetical... 28 6.9
>U41105-4|AAA82397.2| 407|Caenorhabditis elegans 3-ketoacyl-coa
thiolase protein 1 protein.
Length = 407
Score = 251 bits (615), Expect = 3e-67
Identities = 121/223 (54%), Positives = 157/223 (70%)
Frame = +2
Query: 2 AVIFAGLPKSPXCPTVNKVCASGMKSIMLAAQGLQTGAQXIILAGGMESMSNVPFYLKRG 181
A + AGL S TVNKVC+SG+K+I+LAAQ +QTG Q + GGMESMS VPFY++RG
Sbjct: 89 AALGAGLDLSVAVTTVNKVCSSGLKAIILAAQQIQTGHQDFAIGGGMESMSQVPFYVQRG 148
Query: 182 ETSYGGMQLVDGIVFDGLTDVYNKFHMGNCAENTAKKLQITRQDQDEYAVNSYKRSAAAY 361
E YGG Q++DGIV DGLTD Y+K HMGNC E T+K++ ITR+DQDEYA+NSYK+SA A+
Sbjct: 149 EIPYGGFQVIDGIVKDGLTDAYDKVHMGNCGEKTSKEMGITRKDQDEYAINSYKKSAKAW 208
Query: 362 EAKAFVDELVPVPVPQKRGAPVIFAEDEEYKRVNFEKFTKLSTVFQKENGTVTAGNASTL 541
E E+VPV V K+G ++ +DEE+ +VNF+KFT L TVFQK+ GT+TA NASTL
Sbjct: 209 ENGNIGPEVVPVNVKSKKGVTIV-DKDEEFTKVNFDKFTSLRTVFQKD-GTITAANASTL 266
Query: 542 NDGXXXXXXXXXXXXKRLNVKPIARIVGFADGECDPIDFPIXP 670
NDG ++KP+ARI+ + D P+DF + P
Sbjct: 267 NDGAAAVIVASQEAVSEQSLKPLARILAYGDAATHPLDFAVAP 309
>U41105-5|AAA82398.1| 390|Caenorhabditis elegans Hypothetical
protein T02G5.7 protein.
Length = 390
Score = 184 bits (447), Expect = 7e-47
Identities = 96/220 (43%), Positives = 134/220 (60%), Gaps = 1/220 (0%)
Frame = +2
Query: 14 AGLPKSPXCPTVNKVCASGMKSIMLAAQGLQTGAQXIILAGGMESMSNVPFYLKRGETSY 193
AGLP + TVNKVC+S MK+++ AA ++ G IL G E+MS VPFY+ RGE +
Sbjct: 75 AGLPVTTQAVTVNKVCSSSMKALVTAAVEIKAGYYDTILVVGTENMSQVPFYVPRGEIPF 134
Query: 194 GGMQLVDGIVFDGLTDVYNKFHMGNCAENTAKKLQITRQDQDEYAVNSYKRSAAAYEAKA 373
GG+Q+ DGI DGL D+ K MG CAE T K ITR++QD YA+ SYK+++ A+ ++
Sbjct: 135 GGIQMTDGISKDGLEDIKEKGPMGLCAEKTVKDYGITREEQDAYAIESYKKASNAWSSEK 194
Query: 374 FVDELVPVPVPQKRGAPVIFAEDEEYKRVNFEKFTKLSTVFQKE-NGTVTAGNASTLNDG 550
F +E+VPV V R + V+ EDEEYK++ K + L VF ++ GT+T NAS+LNDG
Sbjct: 195 FSEEVVPVSVKTSR-SEVVITEDEEYKKLIESKVSSLKPVFVRDGTGTITPANASSLNDG 253
Query: 551 XXXXXXXXXXXXKRLNVKPIARIVGFADGECDPIDFPIXP 670
+ P+A +V FA+ PIDF + P
Sbjct: 254 AVATVVVGENALPQ-GAHPLAELVAFAEAGRAPIDFTVAP 292
>Z81546-11|CAB04455.2| 394|Caenorhabditis elegans Hypothetical
protein F53A2.7 protein.
Length = 394
Score = 141 bits (342), Expect = 4e-34
Identities = 79/221 (35%), Positives = 123/221 (55%), Gaps = 2/221 (0%)
Frame = +2
Query: 14 AGLPKSPXCPTVNKVCASGMKSIMLAAQGLQTGAQXIILAGGMESMSNVPFYLK--RGET 187
+G+P++ TVN++C SG ++++ AAQ ++ G I+LAGG E+MS VPF ++ R T
Sbjct: 76 SGVPQNVGALTVNRLCGSGFQAVVNAAQAIKLGESNIVLAGGTENMSMVPFAVRDIRFGT 135
Query: 188 SYGGMQLVDGIVFDGLTDVYNKFHMGNCAENTAKKLQITRQDQDEYAVNSYKRSAAAYEA 367
+ G + +++D L+D Y K MG AE + ++TRQ+ DE+A+ S A EA
Sbjct: 136 ALGKKYEFEDMLWDSLSDPYAKLAMGQTAEKLGAQYKVTRQEADEFALRSQTLWKKAQEA 195
Query: 368 KAFVDELVPVPVPQKRGAPVIFAEDEEYKRVNFEKFTKLSTVFQKENGTVTAGNASTLND 547
+ +E+V + + ++G F DE + E KL VFQK+ G V AGNAS ++D
Sbjct: 196 GVYKNEIVGITIKGRKGEE-SFEIDEHPRATTAESLAKLKPVFQKD-GLVNAGNASGISD 253
Query: 548 GXXXXXXXXXXXXKRLNVKPIARIVGFADGECDPIDFPIXP 670
G K N+KP+AR+V ++ CDP I P
Sbjct: 254 GAAALVVAGEDSVKSKNLKPLARVVAYSAVGCDPTIMGIGP 294
>U41105-8|AAA82403.1| 460|Caenorhabditis elegans Hypothetical
protein T02G5.4 protein.
Length = 460
Score = 87.4 bits (207), Expect = 8e-18
Identities = 68/223 (30%), Positives = 104/223 (46%)
Frame = +2
Query: 2 AVIFAGLPKSPXCPTVNKVCASGMKSIMLAAQGLQTGAQXIILAGGMESMSNVPFYLKRG 181
A + AGL S TVNK +SGMK+I+LAAQ +QTG Q + + GGMESMS VPF+L R
Sbjct: 169 AALGAGLDLSVAVTTVNKGWSSGMKAIILAAQQIQTGHQDLAIGGGMESMSQVPFFLARV 228
Query: 182 ETSYGGMQLVDGIVFDGLTDVYNKFHMGNCAENTAKKLQITRQDQDEYAVNSYKRSAAAY 361
E S Q V+ V DG++D + D+ E +N + +
Sbjct: 229 EQSSNKYQ-VEQTVQDGISDFF---------------------DKQELCINGERTNGN-- 264
Query: 362 EAKAFVDELVPVPVPQKRGAPVIFAEDEEYKRVNFEKFTKLSTVFQKENGTVTAGNASTL 541
E+V V V K+G + +D+ K ++ + S++ GT++ + +
Sbjct: 265 ----IGPEVVAVNVKSKKGVEAV-KQDDITKIKKIKEGSVYSSIPIFPGGTISDKHIAAF 319
Query: 542 NDGXXXXXXXXXXXXKRLNVKPIARIVGFADGECDPIDFPIXP 670
DG N+KP+ARI+ + D +DF + P
Sbjct: 320 TDGAAAVILASQEAVSEQNLKPLARILAYGDAATHQLDFAVAP 362
>M77697-2|AAA27897.2| 448|Caenorhabditis elegans Hypothetical
protein B0303.3 protein.
Length = 448
Score = 74.5 bits (175), Expect = 6e-14
Identities = 59/201 (29%), Positives = 92/201 (45%), Gaps = 18/201 (8%)
Frame = +2
Query: 2 AVIFAGLPKSPXCPTVNKVCASGMKSIMLAAQGLQTGAQXIILAGGMESMSNVPF-YLKR 178
A + AG+P TV C S ++ L TG I+AGG+E +S+VP Y +
Sbjct: 91 AALLAGVPDKIPAHTVTLACISSNVAMTTGMGMLATGNANAIIAGGVELLSDVPIRYNRN 150
Query: 179 GETSYGGM--------------QLVDGIV---FDGLTDVYNKFHMGNCAENTAKKLQITR 307
+ GM Q+V ++ + + MG+ + A ++R
Sbjct: 151 ARKAMLGMNKAKDVPSKLKIGGQIVKNLLSPELPAVAEFSTGETMGHSGDRLAAAFNVSR 210
Query: 308 QDQDEYAVNSYKRSAAAYEAKAFVDELVPVPVPQKRGAPVIFAEDEEYKRVNFEKFTKLS 487
++QDE+A+ S+ ++ A + F D +VPV + K+ P ED + EK + L
Sbjct: 211 REQDEFAIRSHTLASEAAKNGKFTD-VVPVFLDGKK--PKTIKEDNGIRVSTLEKLSSLK 267
Query: 488 TVFQKENGTVTAGNASTLNDG 550
F K +GTVTA NAS L DG
Sbjct: 268 PAFVKPHGTVTAANASYLTDG 288
>AF098499-2|AAC67396.1| 155|Caenorhabditis elegans Hypothetical
protein C43H8.1 protein.
Length = 155
Score = 29.5 bits (63), Expect = 2.3
Identities = 13/41 (31%), Positives = 24/41 (58%)
Frame = +2
Query: 209 VDGIVFDGLTDVYNKFHMGNCAENTAKKLQITRQDQDEYAV 331
+DG++F L + N FH C AK+++I R D+ ++ +
Sbjct: 72 LDGLLFQFLDEALNSFHAEPCF--VAKRVEILRFDKKKFEI 110
>U41534-11|AAM22028.1| 686|Caenorhabditis elegans Hypothetical
protein C16A3.1b protein.
Length = 686
Score = 29.1 bits (62), Expect = 3.0
Identities = 18/63 (28%), Positives = 28/63 (44%)
Frame = +2
Query: 305 RQDQDEYAVNSYKRSAAAYEAKAFVDELVPVPVPQKRGAPVIFAEDEEYKRVNFEKFTKL 484
R++ A +R AA A A P P P K PV+F+++ + + TK
Sbjct: 15 REEAIRRAAAYREREMAAANATASTSSAAP-PAPPKPVIPVMFSQNRQPMKPTMNNSTKQ 73
Query: 485 STV 493
ST+
Sbjct: 74 STI 76
>Z36948-4|CAA85411.3| 615|Caenorhabditis elegans Hypothetical
protein D2089.4a protein.
Length = 615
Score = 28.3 bits (60), Expect = 5.2
Identities = 17/52 (32%), Positives = 28/52 (53%)
Frame = +2
Query: 365 AKAFVDELVPVPVPQKRGAPVIFAEDEEYKRVNFEKFTKLSTVFQKENGTVT 520
A AFV + VP+ Q RG +FA+ ++ + F+K +S NG+V+
Sbjct: 169 AAAFVSGMTAVPI-QIRGR-TLFAQYSTHRELKFDKNKAISDTESVANGSVS 218
>Z81545-10|CAB04448.1| 170|Caenorhabditis elegans Hypothetical
protein F49H6.13 protein.
Length = 170
Score = 27.9 bits (59), Expect = 6.9
Identities = 9/12 (75%), Positives = 11/12 (91%)
Frame = -2
Query: 309 CLVICNFFAVFS 274
C ++CNFFAVFS
Sbjct: 15 CAIVCNFFAVFS 26
>U23170-3|AAC46700.2| 125|Caenorhabditis elegans Hypothetical
protein F58F12.2 protein.
Length = 125
Score = 27.9 bits (59), Expect = 6.9
Identities = 10/45 (22%), Positives = 21/45 (46%)
Frame = -1
Query: 463 INSFILFIFSKYYRSPSFLWNGYRYXXXXXXXXXXXSCTSLVTID 329
I S F+F +++ ++LWN +++ T L+ +D
Sbjct: 17 IYSIFKFLFKLFFKFVNYLWNSHKFHEQLVLHNLRKRLTQLIKVD 61
>AL031627-25|CAA20971.1| 170|Caenorhabditis elegans Hypothetical
protein F49H6.13 protein.
Length = 170
Score = 27.9 bits (59), Expect = 6.9
Identities = 9/12 (75%), Positives = 11/12 (91%)
Frame = -2
Query: 309 CLVICNFFAVFS 274
C ++CNFFAVFS
Sbjct: 15 CAIVCNFFAVFS 26
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,967,768
Number of Sequences: 27780
Number of extensions: 269381
Number of successful extensions: 814
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 762
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 807
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1508017654
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -