Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P01_F_L23
         (549 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ257416-1|ABB81847.1|  552|Apis mellifera yellow-h protein.           27   0.13 
EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.          22   4.7  
AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.      22   4.7  
AF134821-1|AAD40236.1|  226|Apis mellifera hexamerin protein.          22   4.7  
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr...    21   6.2  
AY769960-1|AAV34676.1|  603|Apis mellifera soluble guanylyl cycl...    21   8.2  
AB193550-1|BAD66824.1|  699|Apis mellifera soluble guanylyl cycl...    21   8.2  
AB181489-1|BAD22772.1|  603|Apis mellifera soluble guanylyl cycl...    21   8.2  

>DQ257416-1|ABB81847.1|  552|Apis mellifera yellow-h protein.
          Length = 552

 Score = 27.1 bits (57), Expect = 0.13
 Identities = 9/22 (40%), Positives = 14/22 (63%)
 Frame = +3

Query: 309 YIFGGPLDNEYEIDGLHFHWGD 374
           + +  PL ++YE+ GL F W D
Sbjct: 352 FFYPDPLASKYELHGLKFQWTD 373


>EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.
          Length = 683

 Score = 21.8 bits (44), Expect = 4.7
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = +3

Query: 225 TITNTGHSVALTIPKYTSEE 284
           TI +  H     +PKYT+EE
Sbjct: 423 TILDYYHKYKENLPKYTTEE 442


>AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.
          Length = 683

 Score = 21.8 bits (44), Expect = 4.7
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = +3

Query: 225 TITNTGHSVALTIPKYTSEE 284
           TI +  H     +PKYT+EE
Sbjct: 423 TILDYYHKYKENLPKYTTEE 442


>AF134821-1|AAD40236.1|  226|Apis mellifera hexamerin protein.
          Length = 226

 Score = 21.8 bits (44), Expect = 4.7
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = +3

Query: 225 TITNTGHSVALTIPKYTSEE 284
           TI +  H     +PKYT+EE
Sbjct: 49  TILDYYHKYKENLPKYTTEE 68


>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
            protein.
          Length = 1370

 Score = 21.4 bits (43), Expect = 6.2
 Identities = 8/22 (36%), Positives = 12/22 (54%)
 Frame = -3

Query: 94   QRLWSEARYPHPAATDTLITTR 29
            +R W   RY  P+A D  I ++
Sbjct: 1194 KRFWERLRYAIPSAGDISIESK 1215


>AY769960-1|AAV34676.1|  603|Apis mellifera soluble guanylyl cyclase
           beta 1 subunit protein.
          Length = 603

 Score = 21.0 bits (42), Expect = 8.2
 Identities = 7/10 (70%), Positives = 8/10 (80%)
 Frame = -1

Query: 420 EDAYRSMCAP 391
           EDAYR +C P
Sbjct: 557 EDAYRYLCMP 566


>AB193550-1|BAD66824.1|  699|Apis mellifera soluble guanylyl cyclase
           alpha 1 subunit protein.
          Length = 699

 Score = 21.0 bits (42), Expect = 8.2
 Identities = 8/22 (36%), Positives = 15/22 (68%)
 Frame = +3

Query: 393 EHTLNDMRLPLEMHIIHRNKKY 458
           +H   D+ LPL++HI +  ++Y
Sbjct: 672 KHKDVDVTLPLDLHIQNAIREY 693


>AB181489-1|BAD22772.1|  603|Apis mellifera soluble guanylyl cyclase
           beta 1 subunit protein.
          Length = 603

 Score = 21.0 bits (42), Expect = 8.2
 Identities = 7/10 (70%), Positives = 8/10 (80%)
 Frame = -1

Query: 420 EDAYRSMCAP 391
           EDAYR +C P
Sbjct: 557 EDAYRYLCMP 566


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 169,515
Number of Sequences: 438
Number of extensions: 4049
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 15704448
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)