Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P01_F_L22
         (695 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_05_1136 + 34369994-34370312,34370398-34370550,34370648-343707...   260   6e-70
11_02_0124 + 8568012-8568392,8568532-8568798,8568963-8569364           30   2.0  
11_02_0131 + 8651175-8651313,8651567-8651743,8651761-8651879,865...    29   3.5  
01_06_1430 - 37309737-37309946,37310049-37310100,37310348-373104...    29   3.5  
03_04_0090 + 17228253-17228403,17229062-17229129,17229238-172309...    28   8.1  
01_07_0055 + 40782559-40782882,40784448-40784551,40784759-40784768     28   8.1  

>02_05_1136 +
           34369994-34370312,34370398-34370550,34370648-34370745,
           34371563-34371784
          Length = 263

 Score =  260 bits (638), Expect = 6e-70
 Identities = 113/180 (62%), Positives = 151/180 (83%)
 Frame = +1

Query: 154 MFEARLLRSSILKKVLEAIKDLLTQATFDCDDNGIQLQAMDNSHVSLVSLTLRADGFDKY 333
           M E RL++ S+LKKVLEAI++L+T A FDC   G  LQAMD+SHV+LV+L LR++GF+ Y
Sbjct: 1   MLELRLVQGSLLKKVLEAIRELVTDANFDCSGTGFSLQAMDSSHVALVALLLRSEGFEHY 60

Query: 334 RCDRNISMGMNLGSMSKILKCAGDKDTVTIKAQDNADNVTFVFESPNQEKVSDYEMKLMN 513
           RCDRN+SMGMNL +M+K+L+CAG+ D +TIKA D +D VTF+FESPNQ+K++D+EMKLM+
Sbjct: 61  RCDRNLSMGMNLNNMAKMLRCAGNDDIITIKADDGSDTVTFMFESPNQDKIADFEMKLMD 120

Query: 514 LDLEHLGIPETEYSCTIRMPSSEFAXICRDLSQFGESMVISCTKEGVKFSATGDIGSXNV 693
           +D EHLGIP++EY   +RMPSSEF+ IC+DLS  G++++IS TKEGVKFS  GDIG+ N+
Sbjct: 121 IDSEHLGIPDSEYQAIVRMPSSEFSRICKDLSSIGDTVIISVTKEGVKFSTAGDIGTANI 180


>11_02_0124 + 8568012-8568392,8568532-8568798,8568963-8569364
          Length = 349

 Score = 29.9 bits (64), Expect = 2.0
 Identities = 12/30 (40%), Positives = 20/30 (66%)
 Frame = +1

Query: 568 MPSSEFAXICRDLSQFGESMVISCTKEGVK 657
           +PS++F  I + L QF +S+V  C + G+K
Sbjct: 61  LPSNDFNHIFKSLGQFEQSIVQDCARIGLK 90


>11_02_0131 +
           8651175-8651313,8651567-8651743,8651761-8651879,
           8652179-8652589
          Length = 281

 Score = 29.1 bits (62), Expect = 3.5
 Identities = 12/30 (40%), Positives = 19/30 (63%)
 Frame = +1

Query: 568 MPSSEFAXICRDLSQFGESMVISCTKEGVK 657
           +PS++F  I R L QF +S +  CT  G++
Sbjct: 10  LPSNDFNQIFRSLEQFKQSTMQHCTHRGLQ 39


>01_06_1430 -
           37309737-37309946,37310049-37310100,37310348-37310427,
           37310538-37310606,37310710-37310843,37311173-37311332,
           37311483-37311554,37312113-37312246,37312386-37312521,
           37313273-37313416
          Length = 396

 Score = 29.1 bits (62), Expect = 3.5
 Identities = 14/39 (35%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
 Frame = +1

Query: 373 SMSKILKCAGDK-DTVTIKAQDNADNVTFVFESPNQEKV 486
           S+ K+    G K + +++K Q  ADN+ F FE P ++ V
Sbjct: 238 SLEKVFSEVGSKSEMLSVKLQREADNLLFNFEEPLKDYV 276


>03_04_0090 +
           17228253-17228403,17229062-17229129,17229238-17230902,
           17231002-17231143,17231648-17232399
          Length = 925

 Score = 27.9 bits (59), Expect = 8.1
 Identities = 19/56 (33%), Positives = 28/56 (50%)
 Frame = +1

Query: 394 CAGDKDTVTIKAQDNADNVTFVFESPNQEKVSDYEMKLMNLDLEHLGIPETEYSCT 561
           C+  K++  I+  DN  +V    ESP+ ++ S    KLM L+     I ET  S T
Sbjct: 264 CSRLKNSGYIRTDDNLLDVLKHQESPSHQRASSVVAKLMGLEGTTPDIHETARSPT 319


>01_07_0055 + 40782559-40782882,40784448-40784551,40784759-40784768
          Length = 145

 Score = 27.9 bits (59), Expect = 8.1
 Identities = 12/26 (46%), Positives = 18/26 (69%)
 Frame = -1

Query: 467 LSKTNVTLSALSCAFIVTVSLSPAHL 390
           +  TN+ LS L  AF++++SLSP  L
Sbjct: 1   MQTTNLFLSVLEFAFLISLSLSPQSL 26


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,174,520
Number of Sequences: 37544
Number of extensions: 308259
Number of successful extensions: 686
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 675
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 686
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1780264028
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)