Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P01_F_L21
(568 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY341205-1|AAR13769.1| 285|Anopheles gambiae period protein. 25 2.3
AY341204-1|AAR13768.1| 285|Anopheles gambiae period protein. 25 2.3
AY341203-1|AAR13767.1| 285|Anopheles gambiae period protein. 25 2.3
AY341202-1|AAR13766.1| 285|Anopheles gambiae period protein. 25 2.3
AF002238-1|AAB97731.1| 327|Anopheles gambiae ribosomal protein ... 24 3.0
AY534996-1|AAT07394.1| 471|Anopheles gambiae XK-related b protein. 24 4.0
AY341156-1|AAR13720.1| 98|Anopheles gambiae BolA protein. 23 9.2
AY341155-1|AAR13719.1| 98|Anopheles gambiae BolA protein. 23 9.2
AY341154-1|AAR13718.1| 98|Anopheles gambiae BolA protein. 23 9.2
AY341153-1|AAR13717.1| 98|Anopheles gambiae BolA protein. 23 9.2
AY341152-1|AAR13716.1| 98|Anopheles gambiae BolA protein. 23 9.2
AY341151-1|AAR13715.1| 98|Anopheles gambiae BolA protein. 23 9.2
>AY341205-1|AAR13769.1| 285|Anopheles gambiae period protein.
Length = 285
Score = 24.6 bits (51), Expect = 2.3
Identities = 10/21 (47%), Positives = 13/21 (61%)
Frame = -3
Query: 299 PIRDHFDFDKSSEVPPDGSQL 237
P ++FD SSE PP +QL
Sbjct: 147 PHHEYFDSKSSSETPPSYNQL 167
>AY341204-1|AAR13768.1| 285|Anopheles gambiae period protein.
Length = 285
Score = 24.6 bits (51), Expect = 2.3
Identities = 10/21 (47%), Positives = 13/21 (61%)
Frame = -3
Query: 299 PIRDHFDFDKSSEVPPDGSQL 237
P ++FD SSE PP +QL
Sbjct: 147 PHHEYFDSKSSSETPPSYNQL 167
>AY341203-1|AAR13767.1| 285|Anopheles gambiae period protein.
Length = 285
Score = 24.6 bits (51), Expect = 2.3
Identities = 10/21 (47%), Positives = 13/21 (61%)
Frame = -3
Query: 299 PIRDHFDFDKSSEVPPDGSQL 237
P ++FD SSE PP +QL
Sbjct: 147 PHHEYFDSKSSSETPPSYNQL 167
>AY341202-1|AAR13766.1| 285|Anopheles gambiae period protein.
Length = 285
Score = 24.6 bits (51), Expect = 2.3
Identities = 10/21 (47%), Positives = 13/21 (61%)
Frame = -3
Query: 299 PIRDHFDFDKSSEVPPDGSQL 237
P ++FD SSE PP +QL
Sbjct: 147 PHHEYFDSKSSSETPPSYNQL 167
>AF002238-1|AAB97731.1| 327|Anopheles gambiae ribosomal protein L5
protein.
Length = 327
Score = 24.2 bits (50), Expect = 3.0
Identities = 15/38 (39%), Positives = 19/38 (50%), Gaps = 3/38 (7%)
Frame = -2
Query: 390 RKLAPCCRSTRQRR---GGR*MTISHPPCRACSSHTGP 286
RK+ P R+ R+R GGR + PP R S T P
Sbjct: 248 RKIPPSRRNPRRRSPRSGGRWPSCRSPPARRRSRSTRP 285
>AY534996-1|AAT07394.1| 471|Anopheles gambiae XK-related b protein.
Length = 471
Score = 23.8 bits (49), Expect = 4.0
Identities = 9/14 (64%), Positives = 11/14 (78%)
Frame = -1
Query: 436 TISIFSVSWRLRSF 395
T+S+FSV W L SF
Sbjct: 319 TLSLFSVCWALASF 332
>AY341156-1|AAR13720.1| 98|Anopheles gambiae BolA protein.
Length = 98
Score = 22.6 bits (46), Expect = 9.2
Identities = 12/31 (38%), Positives = 16/31 (51%)
Frame = +3
Query: 228 ITTQLAPVWRDFRGLVKVKMVPYGKSTHDKV 320
+T +LAPV + + VP G TH KV
Sbjct: 5 LTKELAPVHLEVVNESYMHNVPKGSETHFKV 35
>AY341155-1|AAR13719.1| 98|Anopheles gambiae BolA protein.
Length = 98
Score = 22.6 bits (46), Expect = 9.2
Identities = 12/31 (38%), Positives = 16/31 (51%)
Frame = +3
Query: 228 ITTQLAPVWRDFRGLVKVKMVPYGKSTHDKV 320
+T +LAPV + + VP G TH KV
Sbjct: 5 LTKELAPVHLEVVNESYMHNVPKGSETHFKV 35
>AY341154-1|AAR13718.1| 98|Anopheles gambiae BolA protein.
Length = 98
Score = 22.6 bits (46), Expect = 9.2
Identities = 12/31 (38%), Positives = 16/31 (51%)
Frame = +3
Query: 228 ITTQLAPVWRDFRGLVKVKMVPYGKSTHDKV 320
+T +LAPV + + VP G TH KV
Sbjct: 5 LTKELAPVHLEVVNESYMHNVPKGSETHFKV 35
>AY341153-1|AAR13717.1| 98|Anopheles gambiae BolA protein.
Length = 98
Score = 22.6 bits (46), Expect = 9.2
Identities = 12/31 (38%), Positives = 16/31 (51%)
Frame = +3
Query: 228 ITTQLAPVWRDFRGLVKVKMVPYGKSTHDKV 320
+T +LAPV + + VP G TH KV
Sbjct: 5 LTKELAPVHLEVVNESYMHNVPKGSETHFKV 35
>AY341152-1|AAR13716.1| 98|Anopheles gambiae BolA protein.
Length = 98
Score = 22.6 bits (46), Expect = 9.2
Identities = 12/31 (38%), Positives = 16/31 (51%)
Frame = +3
Query: 228 ITTQLAPVWRDFRGLVKVKMVPYGKSTHDKV 320
+T +LAPV + + VP G TH KV
Sbjct: 5 LTKELAPVHLEVVNESYMHNVPKGSETHFKV 35
>AY341151-1|AAR13715.1| 98|Anopheles gambiae BolA protein.
Length = 98
Score = 22.6 bits (46), Expect = 9.2
Identities = 12/31 (38%), Positives = 16/31 (51%)
Frame = +3
Query: 228 ITTQLAPVWRDFRGLVKVKMVPYGKSTHDKV 320
+T +LAPV + + VP G TH KV
Sbjct: 5 LTKELAPVHLEVVNESYMHNVPKGSETHFKV 35
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 608,631
Number of Sequences: 2352
Number of extensions: 13215
Number of successful extensions: 27
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 53404389
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -