Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P01_F_L21
(568 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At4g12870.1 68417.m02015 gamma interferon responsive lysosomal t... 68 4e-12
At4g12900.1 68417.m02018 gamma interferon responsive lysosomal t... 62 3e-10
At4g12890.1 68417.m02017 gamma interferon responsive lysosomal t... 58 3e-09
At4g12960.1 68417.m02025 gamma interferon responsive lysosomal t... 58 4e-09
At1g07080.1 68414.m00754 gamma interferon responsive lysosomal t... 58 4e-09
At5g01580.1 68418.m00073 gamma interferon responsive lysosomal t... 51 6e-07
At2g44580.1 68415.m05548 zinc finger (C3HC4-type RING finger) fa... 37 0.008
At3g23980.1 68416.m03012 dentin sialophosphoprotein-related cont... 30 0.94
At2g36910.1 68415.m04527 multidrug resistance P-glycoprotein (PG... 30 0.94
At4g38350.1 68417.m05422 patched family protein similar to SP|O1... 30 1.2
At1g42470.1 68414.m04897 patched family protein similar to SP|O1... 29 1.6
At1g15130.1 68414.m01807 hydroxyproline-rich glycoprotein family... 29 2.2
At1g06490.1 68414.m00688 glycosyl transferase family 48 protein ... 29 2.9
At4g03420.1 68417.m00469 expressed protein 28 5.0
At3g18290.1 68416.m02326 zinc finger protein-related weak alignm... 28 5.0
At1g56510.1 68414.m06498 disease resistance protein (TIR-NBS-LRR... 28 5.0
At5g51750.1 68418.m06417 subtilase family protein similar to sub... 27 6.6
At5g39440.1 68418.m04777 Snf1-related protein kinase, putative s... 27 6.6
At4g00416.1 68417.m00056 methyl-CpG-binding domain-containing pr... 27 6.6
At5g38260.1 68418.m04612 serine/threonine protein kinase, putati... 27 8.7
At3g14740.2 68416.m01864 PHD finger family protein similar to zi... 27 8.7
At3g14740.1 68416.m01863 PHD finger family protein similar to zi... 27 8.7
At2g16210.1 68415.m01857 transcriptional factor B3 family protei... 27 8.7
>At4g12870.1 68417.m02015 gamma interferon responsive lysosomal
thiol reductase family protein / GILT family protein
similar to SP|P13284 Gamma-interferon inducible
lysosomal thiol reductase precursor {Homo sapiens};
contains Pfam profile PF03227: Gamma interferon
inducible lysosomal thiol reductase (GILT)
Length = 229
Score = 68.1 bits (159), Expect = 4e-12
Identities = 42/129 (32%), Positives = 66/129 (51%), Gaps = 3/129 (2%)
Frame = +3
Query: 111 RLVCFLMLLCYVVAKKKT--EDHKVKIAVYYESLCPDSKKFITTQLAPVW-RDFRGLVKV 281
+LV F + + + K E KV++ +YYESLCP + FI +L V+ D + V
Sbjct: 9 KLVFFACFVLFTFSHKLVTGESDKVELNLYYESLCPGCQSFIVDELVKVFDSDLDTITDV 68
Query: 282 KMVPYGKSTHDKVDGKWSFICHHGADECYGNKVQACVLKDRNLQDTEKMEIVICLMNXTS 461
K+VP+G + KV + IC HG +EC N ++ACV+ + + + C+ N T
Sbjct: 69 KLVPFG---YAKVSNNLTVICQHGEEECKLNALEACVINTLP-NPKSQYKFIRCVENNT- 123
Query: 462 PDKSLDTCL 488
D +CL
Sbjct: 124 -DNWESSCL 131
>At4g12900.1 68417.m02018 gamma interferon responsive lysosomal
thiol reductase family protein / GILT family protein
similar to SP|P13284 Gamma-interferon inducible
lysosomal thiol reductase precursor {Homo sapiens};
contains Pfam profile PF03227: Gamma interferon
inducible lysosomal thiol reductase (GILT)
Length = 231
Score = 62.1 bits (144), Expect = 3e-10
Identities = 32/100 (32%), Positives = 52/100 (52%), Gaps = 4/100 (4%)
Frame = +3
Query: 111 RLVCFLMLLCYVVAKKKT---EDHKVKIAVYYESLCPDSKKFITTQLAPVWR-DFRGLVK 278
+LV F LL + + E KVK+ +YYESLCP + FI L ++ D +
Sbjct: 12 KLVFFACLLLFTFSSHNLVAGESDKVKLNLYYESLCPSCQNFIVHHLGKIFNTDLHTITD 71
Query: 279 VKMVPYGKSTHDKVDGKWSFICHHGADECYGNKVQACVLK 398
+K++P+G + V + C HG +EC N ++AC ++
Sbjct: 72 LKLIPFGNA---HVSDDLTVTCQHGEEECKLNALEACAIR 108
>At4g12890.1 68417.m02017 gamma interferon responsive lysosomal
thiol reductase family protein / GILT family protein
similar to SP|P13284 Gamma-interferon inducible
lysosomal thiol reductase precursor {Homo sapiens};
contains Pfam profile PF03227: Gamma interferon
inducible lysosomal thiol reductase (GILT)
Length = 232
Score = 58.4 bits (135), Expect = 3e-09
Identities = 32/99 (32%), Positives = 54/99 (54%), Gaps = 2/99 (2%)
Frame = +3
Query: 171 HKVKIAVYYESLCPDSKKFITTQLAPVW-RDFRGLVKVKMVPYGKSTHDKVDGKWSFICH 347
+KVKI +YYESLCP + FI L ++ D + +K+VP+G + + + C
Sbjct: 37 NKVKINLYYESLCPYCQNFIVDDLGKIFDSDLLKITDLKLVPFGNA---HISNNLTITCQ 93
Query: 348 HGADECYGNKVQACVLKDRNLQDTE-KMEIVICLMNXTS 461
HG +EC N ++AC + R L D + + + + C+ T+
Sbjct: 94 HGEEECKLNALEACGI--RTLPDPKLQYKFIRCVEKDTN 130
>At4g12960.1 68417.m02025 gamma interferon responsive lysosomal
thiol reductase family protein / GILT family protein
similar to SP|P13284 Gamma-interferon inducible
lysosomal thiol reductase precursor {Homo sapiens};
contains Pfam profile PF03227: Gamma interferon
inducible lysosomal thiol reductase (GILT)
Length = 233
Score = 58.0 bits (134), Expect = 4e-09
Identities = 32/99 (32%), Positives = 54/99 (54%), Gaps = 3/99 (3%)
Frame = +3
Query: 111 RLVCF--LMLLCYVVAKKKTEDHKVKIAVYYESLCPDSKKFITTQLAPVW-RDFRGLVKV 281
+LV F L+LL + + KVK+ +YYESLCP ++FI L ++ D + +
Sbjct: 8 KLVFFGCLLLLTFTDNLVAGKSGKVKLNLYYESLCPGCQEFIVDDLGKIFDYDLYTITDL 67
Query: 282 KMVPYGKSTHDKVDGKWSFICHHGADECYGNKVQACVLK 398
K+ P+G + ++ + C HG +EC N ++AC L+
Sbjct: 68 KLFPFGNA---ELSDNLTVTCQHGEEECKLNALEACALR 103
>At1g07080.1 68414.m00754 gamma interferon responsive lysosomal
thiol reductase family protein / GILT family protein
similar to SP|P13284 Gamma-interferon inducible
lysosomal thiol reductase precursor {Homo sapiens};
contains Pfam profile PF03227: Gamma interferon
inducible lysosomal thiol reductase (GILT)
Length = 265
Score = 58.0 bits (134), Expect = 4e-09
Identities = 39/131 (29%), Positives = 67/131 (51%), Gaps = 2/131 (1%)
Frame = +3
Query: 174 KVKIAVYYESLCPDSKKFITTQLAPVWR-DFRGLVKVKMVPYGKSTHDKVDGKWSFICHH 350
KV + +YYESLCP FI LA ++ D +V + + P+G +T + D + +C H
Sbjct: 38 KVSVGLYYESLCPYCSSFIVNHLAKLFEDDLISIVDLHLSPWG-NTKLRSDNV-TAVCQH 95
Query: 351 GADECYGNKVQACVLKDRNLQDTEKMEIVICLMNXTSPDKSLDTCLTQVDKMSESDK-LK 527
GA EC+ + V+AC + D + ++ + C+ + K D T +K++ + K +
Sbjct: 96 GAFECFLDTVEACAI-DAWPKVSDHFPFIYCVEKLVTEHK-YDKWETCYEKLNLNSKPVA 153
Query: 528 RCASXEQGDNL 560
C S G+ L
Sbjct: 154 DCLSSGHGNEL 164
>At5g01580.1 68418.m00073 gamma interferon responsive lysosomal
thiol reductase family protein / GILT family protein
similar to SP|P13284 Gamma-interferon inducible
lysosomal thiol reductase precursor {Homo sapiens};
contains Pfam profile PF03227: Gamma interferon
inducible lysosomal thiol reductase (GILT)
Length = 233
Score = 50.8 bits (116), Expect = 6e-07
Identities = 26/100 (26%), Positives = 49/100 (49%), Gaps = 1/100 (1%)
Frame = +3
Query: 99 MKXLRLVCFLMLLCYVVAKKKTEDHKVKIAVYYESLCPDSKKFITTQLAPVWR-DFRGLV 275
M + +C + + KV +++YYE+LCP +FI +L ++ +
Sbjct: 1 MASYQRLCITSCTIFFCLLSLSSSQKVTLSLYYEALCPFCAEFIVNRLPKIFETGLISSI 60
Query: 276 KVKMVPYGKSTHDKVDGKWSFICHHGADECYGNKVQACVL 395
+++VP+G + + DG + +C HG EC N + AC +
Sbjct: 61 DLQLVPWGNAA-IRPDG--TILCQHGEAECALNAIHACAI 97
>At2g44580.1 68415.m05548 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 624
Score = 37.1 bits (82), Expect = 0.008
Identities = 22/72 (30%), Positives = 35/72 (48%), Gaps = 1/72 (1%)
Frame = +3
Query: 315 KVDGKWSFICHHGADECYGNKVQACVLKDRNLQDTEKMEIVICLMNXTSPDKSLDTCLTQ 494
++DG W I + D + CVLKD + D ++ E+V L+ P + CL
Sbjct: 194 EIDGFWRVIDENYLDVILRMLLHNCVLKDWSFDDLDEDEVVNALVADEFPSQLASHCLRV 253
Query: 495 V-DKMSESDKLK 527
K++E+DK K
Sbjct: 254 FGSKVNETDKWK 265
>At3g23980.1 68416.m03012 dentin sialophosphoprotein-related
contains weak similarity to Dentin sialophosphoprotein
precursor (Swiss-Prot:Q9NZW4) [Homo sapiens]
Length = 736
Score = 30.3 bits (65), Expect = 0.94
Identities = 14/28 (50%), Positives = 18/28 (64%)
Frame = +1
Query: 250 SGGTSEDLSKSKWSRMGRARTTRWMGNG 333
SGG S DLSK+ SR + +T +GNG
Sbjct: 525 SGGKSTDLSKNSTSRKNVSTSTEGLGNG 552
>At2g36910.1 68415.m04527 multidrug resistance P-glycoprotein (PGP1)
identical to P-glycoprotein GI:3849833 from [Arabidopsis
thaliana]; homologous to mammalian mdr gene,contains
ATP-binding cassette; related to multi drug resistance
proteins
Length = 1286
Score = 30.3 bits (65), Expect = 0.94
Identities = 18/66 (27%), Positives = 31/66 (46%)
Frame = -3
Query: 269 SSEVPPDGSQLRRYKLLAVRTKGFVIDRYFDLMVFGFLLRHDIAEQHQKANQPEXLHLVV 90
S V DG +R+Y L A+R ++ + + +FG + +IA H+ A + E +
Sbjct: 1080 SGRVMIDGKDIRKYNLKAIRKHIAIVPQ--EPCLFGTTIYENIAYGHECATEAEIIQAAT 1137
Query: 89 LYQEKK 72
L K
Sbjct: 1138 LASAHK 1143
>At4g38350.1 68417.m05422 patched family protein similar to
SP|O15118 Niemann-Pick C1 protein precursor from Homo
sapiens (PID:g2276463); contains Pfam profile PF02460
Patched family
Length = 1064
Score = 29.9 bits (64), Expect = 1.2
Identities = 16/47 (34%), Positives = 23/47 (48%)
Frame = +3
Query: 117 VCFLMLLCYVVAKKKTEDHKVKIAVYYESLCPDSKKFITTQLAPVWR 257
V ++ LC + K E K+ V ES + KKF T L+P +R
Sbjct: 315 VAIVLALCSGLYNFKVETRPEKLWVGPESKAAEEKKFFDTHLSPFYR 361
>At1g42470.1 68414.m04897 patched family protein similar to
SP|O15118 Niemann-Pick C1 protein precursor from Homo
sapiens (GB:AAB63982) (GI:2276463); contains Pfam
profile PF02460 Patched family
Length = 1272
Score = 29.5 bits (63), Expect = 1.6
Identities = 16/47 (34%), Positives = 24/47 (51%)
Frame = +3
Query: 117 VCFLMLLCYVVAKKKTEDHKVKIAVYYESLCPDSKKFITTQLAPVWR 257
V ++LLC + + K E K+ V S + K+F T LAP +R
Sbjct: 356 VSVVLLLCVGLIRFKVETRPDKLWVGSGSRAAEEKQFFDTHLAPFYR 402
>At1g15130.1 68414.m01807 hydroxyproline-rich glycoprotein family
protein
Length = 846
Score = 29.1 bits (62), Expect = 2.2
Identities = 12/31 (38%), Positives = 15/31 (48%)
Frame = +2
Query: 377 GASLRPEGPQPPGHGEDGDCNMPHEPXQPRQ 469
G S+ P GP PP H G P+ P +Q
Sbjct: 776 GYSIPPYGPPPPYHTPHGQAPQPYPPQAQQQ 806
>At1g06490.1 68414.m00688 glycosyl transferase family 48 protein
contains Pfam profile: PF02364 1,3-beta-glucan synthase
Length = 1933
Score = 28.7 bits (61), Expect = 2.9
Identities = 19/68 (27%), Positives = 32/68 (47%), Gaps = 7/68 (10%)
Frame = +3
Query: 135 LCYVVAKKKTEDHKVKIA-VY------YESLCPDSKKFITTQLAPVWRDFRGLVKVKMVP 293
LCY+ E H + VY YE+ PD + F+ + P+++ R +V+
Sbjct: 363 LCYIFHNMANEVHGILFGNVYPVTGDTYEAGAPDEEAFLRNVITPIYQVLR--KEVRRNK 420
Query: 294 YGKSTHDK 317
GK++H K
Sbjct: 421 NGKASHSK 428
>At4g03420.1 68417.m00469 expressed protein
Length = 310
Score = 27.9 bits (59), Expect = 5.0
Identities = 15/37 (40%), Positives = 20/37 (54%)
Frame = +3
Query: 435 VICLMNXTSPDKSLDTCLTQVDKMSESDKLKRCASXE 545
+I L + + +S D+ SESDKL RCAS E
Sbjct: 97 LIRLRDDSEDGESRDSFSDSYSDESESDKLSRCASDE 133
>At3g18290.1 68416.m02326 zinc finger protein-related weak alignment
to Pfam profiles: PF00097 Zinc finger, C3HC4 type (RING
finger) (2 copies)
Length = 1254
Score = 27.9 bits (59), Expect = 5.0
Identities = 13/44 (29%), Positives = 19/44 (43%)
Frame = -2
Query: 222 SCCQDKGIRNRPLF*PYGLRFSSSPRHSRAASESKPAGEXSSCC 91
SCCQ + R ++P + A+ KP+G SCC
Sbjct: 563 SCCQHQDKRPAKRTAVLSCEKKTTPHSTEVANGCKPSGNGRSCC 606
>At1g56510.1 68414.m06498 disease resistance protein (TIR-NBS-LRR
class), putative domain signature TIR-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 1007
Score = 27.9 bits (59), Expect = 5.0
Identities = 15/48 (31%), Positives = 26/48 (54%), Gaps = 3/48 (6%)
Frame = +3
Query: 393 LKDRNLQDTEKMEI---VICLMNXTSPDKSLDTCLTQVDKMSESDKLK 527
L + N+QD+E ++ CL N D S +CLT++ +S + L+
Sbjct: 603 LVEVNMQDSELQKLWEGTQCLANLKKIDLSRSSCLTELPDLSNATNLE 650
>At5g51750.1 68418.m06417 subtilase family protein similar to
subtilisin-like protease GI:3687307 from [Lycopersicon
esculentum]
Length = 780
Score = 27.5 bits (58), Expect = 6.6
Identities = 12/38 (31%), Positives = 21/38 (55%)
Frame = +3
Query: 156 KKTEDHKVKIAVYYESLCPDSKKFITTQLAPVWRDFRG 269
++ DH V + V + P+S+ F T ++PV +RG
Sbjct: 141 ERVTDHDVVVGVLDTGIWPESESFNDTGMSPVPATWRG 178
>At5g39440.1 68418.m04777 Snf1-related protein kinase, putative
similar to SNF1-related protein kinase KIN10 (EC
2.7.1.-) (AKIN10) [Arabidopsis thaliana]
SWISS-PROT:Q38997
Length = 494
Score = 27.5 bits (58), Expect = 6.6
Identities = 11/53 (20%), Positives = 26/53 (49%)
Frame = -3
Query: 215 VRTKGFVIDRYFDLMVFGFLLRHDIAEQHQKANQPEXLHLVVLYQEKKRLYDF 57
++ G I ++ + FL+ I Q++ P +++V+ Y + L+D+
Sbjct: 55 IKNMGIEIKVQREIKILRFLMHPHIIRQYEVIETPNDIYVVMEYVKSGELFDY 107
>At4g00416.1 68417.m00056 methyl-CpG-binding domain-containing
protein contains Pfam profile PF01429: Methyl-CpG
binding domain
Length = 163
Score = 27.5 bits (58), Expect = 6.6
Identities = 11/17 (64%), Positives = 13/17 (76%)
Frame = +3
Query: 177 VKIAVYYESLCPDSKKF 227
VK+ VYYESL P K+F
Sbjct: 90 VKVDVYYESLAPRRKRF 106
>At5g38260.1 68418.m04612 serine/threonine protein kinase, putative
similar to receptor serine/threonine kinase PR55K
gi|1235680|gb|AAC49208; contains protein kinase domain,
Pfam:PF00069; contains serine/threonine protein kinase
domain, INTERPRO:IPR002290
Length = 638
Score = 27.1 bits (57), Expect = 8.7
Identities = 19/66 (28%), Positives = 29/66 (43%), Gaps = 5/66 (7%)
Frame = +3
Query: 219 KKFITTQLAPVWRDFRGLVKVKMVPYGK-----STHDKVDGKWSFICHHGADECYGNKVQ 383
K+ + L P + +GLV++K Y + GK F +G + C G KV
Sbjct: 288 KRRTSHHLRPRDNNLKGLVQLKQYSYAEVRKITKLFSHTLGKGGFGTVYGGNLCDGRKVA 347
Query: 384 ACVLKD 401
+LKD
Sbjct: 348 VKILKD 353
>At3g14740.2 68416.m01864 PHD finger family protein similar to
zinc-finger protein BR140 [PIR|JC2069][Homo sapiens];
contains PHD-finger domain PF00628
Length = 343
Score = 27.1 bits (57), Expect = 8.7
Identities = 17/48 (35%), Positives = 28/48 (58%), Gaps = 3/48 (6%)
Frame = -3
Query: 158 LLRHDI--AEQHQKANQPEXLHLVVLYQEKKRL-YDFFETPAHNNVTT 24
LL+ D+ A+QHQ NQPE L + +++K+ D+ + A N+ T
Sbjct: 16 LLQRDLEAAQQHQLPNQPEMKSLQLPAKKRKQTRVDYDDDDAENSNPT 63
>At3g14740.1 68416.m01863 PHD finger family protein similar to
zinc-finger protein BR140 [PIR|JC2069][Homo sapiens];
contains PHD-finger domain PF00628
Length = 341
Score = 27.1 bits (57), Expect = 8.7
Identities = 17/48 (35%), Positives = 28/48 (58%), Gaps = 3/48 (6%)
Frame = -3
Query: 158 LLRHDI--AEQHQKANQPEXLHLVVLYQEKKRL-YDFFETPAHNNVTT 24
LL+ D+ A+QHQ NQPE L + +++K+ D+ + A N+ T
Sbjct: 16 LLQRDLEAAQQHQLPNQPEMKSLQLPAKKRKQTRVDYDDDDAENSNPT 63
>At2g16210.1 68415.m01857 transcriptional factor B3 family protein
contains Pfam profile PF02362: B3 DNA binding domain
Length = 291
Score = 27.1 bits (57), Expect = 8.7
Identities = 10/28 (35%), Positives = 17/28 (60%)
Frame = -1
Query: 91 FYIRKKNDYMIFLKLPRTITSRQASDPK 8
F I K Y++FL++P +++ Q D K
Sbjct: 203 FTILFKQGYLVFLRIPNSVSKDQVPDEK 230
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,932,477
Number of Sequences: 28952
Number of extensions: 268482
Number of successful extensions: 804
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 776
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 798
length of database: 12,070,560
effective HSP length: 77
effective length of database: 9,841,256
effective search space used: 1092379416
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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