Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P01_F_L17
         (792 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY920544-1|AAX62142.1|  463|Tribolium castaneum cytochrome P450 ...    24   1.6  
AF251548-1|AAF70178.1|  491|Tribolium castaneum cytochrome P450 ...    23   2.1  
AY337337-2|AAP94193.1|  491|Tribolium castaneum cytochrome P450 ...    23   3.7  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    23   3.7  
EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2 p...    22   6.5  
AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain tran...    22   6.5  
AF231104-1|AAF64149.1|  142|Tribolium castaneum labial protein p...    22   6.5  
AF231103-1|AAF64148.1|  142|Tribolium castaneum labial protein p...    22   6.5  
AM712905-1|CAN84644.1|  102|Tribolium castaneum hypothetical pro...    21   8.5  
AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory recept...    21   8.5  

>AY920544-1|AAX62142.1|  463|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 463

 Score = 23.8 bits (49), Expect = 1.6
 Identities = 8/24 (33%), Positives = 15/24 (62%)
 Frame = -3

Query: 586 HFTPRVSDAFKFLALTRKVVVYAE 515
           H  P++++ F++  L RKV  + E
Sbjct: 180 HLVPKIAEFFEYRVLPRKVTDFFE 203


>AF251548-1|AAF70178.1|  491|Tribolium castaneum cytochrome P450
           monooxigenase CYP4Q4 protein.
          Length = 491

 Score = 23.4 bits (48), Expect = 2.1
 Identities = 8/15 (53%), Positives = 12/15 (80%)
 Frame = +3

Query: 630 GTGLITTIGPKTETK 674
           GTGL+T+ GPK + +
Sbjct: 112 GTGLLTSAGPKWQNR 126


>AY337337-2|AAP94193.1|  491|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 491

 Score = 22.6 bits (46), Expect = 3.7
 Identities = 8/15 (53%), Positives = 12/15 (80%)
 Frame = +3

Query: 630 GTGLITTIGPKTETK 674
           GTGL+T+ GPK + +
Sbjct: 112 GTGLLTSRGPKWQNR 126


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 22.6 bits (46), Expect = 3.7
 Identities = 8/14 (57%), Positives = 12/14 (85%)
 Frame = +3

Query: 276 YRLSKLESLCTLLT 317
           +RLSK ++ CTL+T
Sbjct: 398 FRLSKTKTFCTLVT 411


>EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2
           protein.
          Length = 535

 Score = 21.8 bits (44), Expect = 6.5
 Identities = 7/13 (53%), Positives = 10/13 (76%)
 Frame = +2

Query: 158 LKSAKTFECVLIM 196
           LK A+TF CV ++
Sbjct: 39  LKGARTFRCVFVL 51


>AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain
           transcription factor Labialprotein.
          Length = 353

 Score = 21.8 bits (44), Expect = 6.5
 Identities = 7/15 (46%), Positives = 11/15 (73%)
 Frame = -3

Query: 241 WYQNLHLEQGYRLKE 197
           W+QN  ++Q  R+KE
Sbjct: 300 WFQNRRMKQKKRMKE 314


>AF231104-1|AAF64149.1|  142|Tribolium castaneum labial protein
           protein.
          Length = 142

 Score = 21.8 bits (44), Expect = 6.5
 Identities = 7/15 (46%), Positives = 11/15 (73%)
 Frame = -3

Query: 241 WYQNLHLEQGYRLKE 197
           W+QN  ++Q  R+KE
Sbjct: 89  WFQNRRMKQKKRMKE 103


>AF231103-1|AAF64148.1|  142|Tribolium castaneum labial protein
           protein.
          Length = 142

 Score = 21.8 bits (44), Expect = 6.5
 Identities = 7/15 (46%), Positives = 11/15 (73%)
 Frame = -3

Query: 241 WYQNLHLEQGYRLKE 197
           W+QN  ++Q  R+KE
Sbjct: 89  WFQNRRMKQKKRMKE 103


>AM712905-1|CAN84644.1|  102|Tribolium castaneum hypothetical
           protein protein.
          Length = 102

 Score = 21.4 bits (43), Expect = 8.5
 Identities = 11/28 (39%), Positives = 14/28 (50%)
 Frame = +2

Query: 539 SQGQKFKSIRHTRGKMLGGSSSLNSMFY 622
           S   KF +  +T G +LG SS     FY
Sbjct: 17  SNFSKFINCHYTSGHLLGSSSLPLRSFY 44


>AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory receptor
           candidate 1 protein.
          Length = 373

 Score = 21.4 bits (43), Expect = 8.5
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = +3

Query: 270 SLYRLSKLESLCTLL 314
           S +RLSK +S CT +
Sbjct: 33  SYFRLSKAKSFCTFV 47


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 169,102
Number of Sequences: 336
Number of extensions: 3585
Number of successful extensions: 17
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 21480183
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)