Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P01_F_L17
         (792 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC034502-1|AAH34502.1|  594|Homo sapiens choline dehydrogenase p...    89   1e-17
AJ272267-1|CAB75961.1|  482|Homo sapiens choline dehydrogenase p...    62   2e-09
X15722-1|CAA33744.1|  479|Homo sapiens protein ( Human mRNA for ...    32   2.7  
BC069244-1|AAH69244.1|  522|Homo sapiens glutathione reductase p...    32   2.7  
AY338490-1|AAP88037.1|  479|Homo sapiens glutathione reductase p...    32   2.7  
AF228704-1|AAF37574.1|  522|Homo sapiens mitochondrial glutathio...    32   2.7  
AF228703-2|AAF37573.1|  479|Homo sapiens cytosolic glutathione r...    32   2.7  
AF228703-1|AAF37572.1|  522|Homo sapiens mitochondrial glutathio...    32   2.7  
AF208018-1|AAF15900.1|  497|Homo sapiens thioredoxin reductase p...    30   8.3  

>BC034502-1|AAH34502.1|  594|Homo sapiens choline dehydrogenase
           protein.
          Length = 594

 Score = 89.4 bits (212), Expect = 1e-17
 Identities = 51/141 (36%), Positives = 80/141 (56%), Gaps = 5/141 (3%)
 Frame = +2

Query: 311 AHANVPADSSYDFIIVGGGSAGCVLANRLTEVANWTVLMIEAGD-DPPSIANSPGYSL-I 484
           A A   +   Y +++VG GSAGCVLA RLTE     VL++EAG  D  + +    + + +
Sbjct: 31  ASAGSESRDEYSYVVVGAGSAGCVLAGRLTEDPAERVLLLEAGPKDVRAGSKRLSWKIHM 90

Query: 485 TSTLLPNWGYFGVNDDFSSQGQKF---KSIRHTRGKMLGGSSSLNSMFYVRGNRADYDNW 655
            + L+ N      N  + ++ Q+    + +   RG++ GGSSSLN+M YVRG+  DY+ W
Sbjct: 91  PAALVANLCDDRYNWCYHTEVQRGLDGRVLYWPRGRVWGGSSSLNAMVYVRGHAEDYERW 150

Query: 656 AENGNEGWDWNTVIQYFKKSE 718
              G  GWD+   + YF+K++
Sbjct: 151 QRQGARGWDYAHCLPYFRKAQ 171


>AJ272267-1|CAB75961.1|  482|Homo sapiens choline dehydrogenase
           protein.
          Length = 482

 Score = 62.5 bits (145), Expect = 2e-09
 Identities = 24/48 (50%), Positives = 34/48 (70%)
 Frame = +2

Query: 575 RGKMLGGSSSLNSMFYVRGNRADYDNWAENGNEGWDWNTVIQYFKKSE 718
           RG++ GGSSSLN+M YVRG+  DY+ W   G  GWD+   + YF+K++
Sbjct: 12  RGRVWGGSSSLNAMVYVRGHAEDYERWQRQGARGWDYAHCLPYFRKAQ 59


>X15722-1|CAA33744.1|  479|Homo sapiens protein ( Human mRNA for
           glutathione reductase (EC 1.6.4.2). ).
          Length = 479

 Score = 31.9 bits (69), Expect = 2.7
 Identities = 12/26 (46%), Positives = 18/26 (69%)
 Frame = +2

Query: 329 ADSSYDFIIVGGGSAGCVLANRLTEV 406
           A +SYD++++GGGS G   A R  E+
Sbjct: 18  AVASYDYLVIGGGSGGLASARRAAEL 43


>BC069244-1|AAH69244.1|  522|Homo sapiens glutathione reductase
           protein.
          Length = 522

 Score = 31.9 bits (69), Expect = 2.7
 Identities = 12/26 (46%), Positives = 18/26 (69%)
 Frame = +2

Query: 329 ADSSYDFIIVGGGSAGCVLANRLTEV 406
           A +SYD++++GGGS G   A R  E+
Sbjct: 61  AVASYDYLVIGGGSGGLASARRAAEL 86


>AY338490-1|AAP88037.1|  479|Homo sapiens glutathione reductase
           protein.
          Length = 479

 Score = 31.9 bits (69), Expect = 2.7
 Identities = 12/26 (46%), Positives = 18/26 (69%)
 Frame = +2

Query: 329 ADSSYDFIIVGGGSAGCVLANRLTEV 406
           A +SYD++++GGGS G   A R  E+
Sbjct: 18  AVASYDYLVIGGGSGGLASARRAAEL 43


>AF228704-1|AAF37574.1|  522|Homo sapiens mitochondrial glutathione
           reductase protein.
          Length = 522

 Score = 31.9 bits (69), Expect = 2.7
 Identities = 12/26 (46%), Positives = 18/26 (69%)
 Frame = +2

Query: 329 ADSSYDFIIVGGGSAGCVLANRLTEV 406
           A +SYD++++GGGS G   A R  E+
Sbjct: 61  AVASYDYLVIGGGSGGLASARRAAEL 86


>AF228703-2|AAF37573.1|  479|Homo sapiens cytosolic glutathione
           reductase protein.
          Length = 479

 Score = 31.9 bits (69), Expect = 2.7
 Identities = 12/26 (46%), Positives = 18/26 (69%)
 Frame = +2

Query: 329 ADSSYDFIIVGGGSAGCVLANRLTEV 406
           A +SYD++++GGGS G   A R  E+
Sbjct: 18  AVASYDYLVIGGGSGGLASARRAAEL 43


>AF228703-1|AAF37572.1|  522|Homo sapiens mitochondrial glutathione
           reductase protein.
          Length = 522

 Score = 31.9 bits (69), Expect = 2.7
 Identities = 12/26 (46%), Positives = 18/26 (69%)
 Frame = +2

Query: 329 ADSSYDFIIVGGGSAGCVLANRLTEV 406
           A +SYD++++GGGS G   A R  E+
Sbjct: 61  AVASYDYLVIGGGSGGLASARRAAEL 86


>AF208018-1|AAF15900.1|  497|Homo sapiens thioredoxin reductase
           protein.
          Length = 497

 Score = 30.3 bits (65), Expect = 8.3
 Identities = 14/44 (31%), Positives = 22/44 (50%)
 Frame = +2

Query: 320 NVPADSSYDFIIVGGGSAGCVLANRLTEVANWTVLMIEAGDDPP 451
           ++P    YD II+GGGS G   A    +     V++++ G   P
Sbjct: 6   DLPKSYDYDLIIIGGGSGGLAAAKEPAQYGK-KVMVLDFGTPTP 48


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 103,160,746
Number of Sequences: 237096
Number of extensions: 2098617
Number of successful extensions: 3967
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 3817
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3966
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9701808132
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)