Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P01_F_L15
         (693 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI0000D5619F Cluster: PREDICTED: similar to CG6604-PA;...    58   2e-07
UniRef50_Q94890 Cluster: T-box protein H15; n=10; Diptera|Rep: T...    38   0.31 

>UniRef50_UPI0000D5619F Cluster: PREDICTED: similar to CG6604-PA;
           n=4; Endopterygota|Rep: PREDICTED: similar to CG6604-PA
           - Tribolium castaneum
          Length = 594

 Score = 58.4 bits (135), Expect = 2e-07
 Identities = 36/82 (43%), Positives = 42/82 (51%)
 Frame = +1

Query: 403 KSAGDRMVAEEGKTRATDFSIAAIMARSAVERRSPDARSPPHTGLGXXXXXXXXXXXXXX 582
           +SA   ++A   KTRATDFSIAAIMAR AV     DAR  P  G                
Sbjct: 86  ESAAAGLLAPTAKTRATDFSIAAIMARGAVAPPDADARELPGDG--------AASRSSSP 137

Query: 583 XXXXXXXDEDVEVDVEQCSDGE 648
                  D+D+EVDVE+CSD E
Sbjct: 138 DMEDPLEDDDIEVDVEECSDSE 159


>UniRef50_Q94890 Cluster: T-box protein H15; n=10; Diptera|Rep:
           T-box protein H15 - Drosophila melanogaster (Fruit fly)
          Length = 660

 Score = 37.5 bits (83), Expect = 0.31
 Identities = 26/67 (38%), Positives = 30/67 (44%)
 Frame = +1

Query: 448 ATDFSIAAIMARSAVERRSPDARSPPHTGLGXXXXXXXXXXXXXXXXXXXXXDEDVEVDV 627
           ATDFSIAAIMAR      +P +R P    L                      D+DV+VDV
Sbjct: 78  ATDFSIAAIMARGG---NAPSSREPSERSLSPASVERYSGQDA---------DDDVDVDV 125

Query: 628 EQCSDGE 648
             CSD E
Sbjct: 126 VDCSDSE 132


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 555,657,607
Number of Sequences: 1657284
Number of extensions: 9723106
Number of successful extensions: 28346
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 27414
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28341
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 54545459628
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)