Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P01_F_L15
         (693 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical pro...    22   4.1  
AM292358-1|CAL23170.2|  331|Tribolium castaneum gustatory recept...    22   4.1  
AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory recept...    22   4.1  
AY074761-1|AAL71874.1|  314|Tribolium castaneum ultrabithorax pr...    21   7.2  

>AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical
           protein protein.
          Length = 205

 Score = 22.2 bits (45), Expect = 4.1
 Identities = 9/26 (34%), Positives = 14/26 (53%)
 Frame = -3

Query: 346 SSPLTITPTTSVTSYCFNHILFFFKL 269
           +S +T+    +   Y F HI FFF +
Sbjct: 55  TSSVTLHVCFNSYMYAFTHIFFFFAI 80


>AM292358-1|CAL23170.2|  331|Tribolium castaneum gustatory receptor
           candidate 37 protein.
          Length = 331

 Score = 22.2 bits (45), Expect = 4.1
 Identities = 16/52 (30%), Positives = 22/52 (42%), Gaps = 1/52 (1%)
 Frame = -2

Query: 593 DLQLDAGE-LNDAGELCRDPNPVCGGERASGLRRSTALRAMMAAIEKSVALV 441
           DL+L   E  ND     +D  PV    R   + RST  R   A +   + +V
Sbjct: 271 DLELKHIENFNDFVTALKDNVPVFAAARFYAINRSTIFRMFNAIVTFLIVMV 322


>AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory receptor
           candidate 32 protein.
          Length = 651

 Score = 22.2 bits (45), Expect = 4.1
 Identities = 16/52 (30%), Positives = 22/52 (42%), Gaps = 1/52 (1%)
 Frame = -2

Query: 593 DLQLDAGE-LNDAGELCRDPNPVCGGERASGLRRSTALRAMMAAIEKSVALV 441
           DL+L   E  ND     +D  PV    R   + RST  R   A +   + +V
Sbjct: 591 DLELKHIENFNDFVTALKDNVPVFAAARFYAINRSTIFRMFNAIVTFLIVMV 642


>AY074761-1|AAL71874.1|  314|Tribolium castaneum ultrabithorax
           protein.
          Length = 314

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 8/18 (44%), Positives = 10/18 (55%)
 Frame = +3

Query: 468 GHHGSQRGRTAQSGRAFP 521
           GHH  Q    A + R+FP
Sbjct: 23  GHHHEQSAAAAAAYRSFP 40


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 129,516
Number of Sequences: 336
Number of extensions: 2431
Number of successful extensions: 12
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18218375
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)