Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P01_F_L13
         (825 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ223614-1|CAA11490.1|  301|Tribolium castaneum orthodenticle-2 ...    24   1.3  
AY337337-2|AAP94193.1|  491|Tribolium castaneum cytochrome P450 ...    23   2.9  
AF251548-1|AAF70178.1|  491|Tribolium castaneum cytochrome P450 ...    23   2.9  
DQ855500-1|ABH88187.1|  126|Tribolium castaneum chemosensory pro...    23   3.9  
AF321227-6|AAK16426.1|  150|Tribolium castaneum Pb protein.            22   5.1  
AF187068-1|AAF03888.1|  477|Tribolium castaneum proboscipedia or...    22   5.1  
EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock prote...    22   6.8  
AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain tran...    21   9.0  
AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia or...    21   9.0  

>AJ223614-1|CAA11490.1|  301|Tribolium castaneum orthodenticle-2
           protein protein.
          Length = 301

 Score = 24.2 bits (50), Expect = 1.3
 Identities = 12/37 (32%), Positives = 19/37 (51%)
 Frame = +2

Query: 638 WSYHHIWSYILQRQVPYCSLYDKGYTSIGSTTNTWPN 748
           WS   I S+ L++   +CS      ++  STTN + N
Sbjct: 219 WSPASIDSFTLEQHRSWCSSSQPVLSTTNSTTNCYNN 255


>AY337337-2|AAP94193.1|  491|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 491

 Score = 23.0 bits (47), Expect = 2.9
 Identities = 12/38 (31%), Positives = 18/38 (47%), Gaps = 3/38 (7%)
 Frame = -3

Query: 442 HFNLLNEFLDFDKRSLCPYVDDFKV---LPYVAALVNI 338
           HFN+L EF+          V+D +     PY+  +V I
Sbjct: 135 HFNILQEFIQIFNEETKRLVEDLEAESHKPYIDVVVPI 172


>AF251548-1|AAF70178.1|  491|Tribolium castaneum cytochrome P450
           monooxigenase CYP4Q4 protein.
          Length = 491

 Score = 23.0 bits (47), Expect = 2.9
 Identities = 12/38 (31%), Positives = 18/38 (47%), Gaps = 3/38 (7%)
 Frame = -3

Query: 442 HFNLLNEFLDFDKRSLCPYVDDFKV---LPYVAALVNI 338
           HFN+L EF+          V+D +     PY+  +V I
Sbjct: 135 HFNILQEFIQIFNEETKRLVEDLEAECHKPYIDVVVPI 172


>DQ855500-1|ABH88187.1|  126|Tribolium castaneum chemosensory
           protein 14 protein.
          Length = 126

 Score = 22.6 bits (46), Expect = 3.9
 Identities = 8/17 (47%), Positives = 13/17 (76%)
 Frame = +2

Query: 470 EGEMKETLQRLLEKDGI 520
           +GE K+   +LLEK+G+
Sbjct: 108 KGEYKQKYNKLLEKEGL 124


>AF321227-6|AAK16426.1|  150|Tribolium castaneum Pb protein.
          Length = 150

 Score = 22.2 bits (45), Expect = 5.1
 Identities = 8/17 (47%), Positives = 10/17 (58%)
 Frame = +3

Query: 762 TRTASVASPTTPPGDYP 812
           T  AS++   TPP  YP
Sbjct: 82  THGASISPQNTPPAGYP 98


>AF187068-1|AAF03888.1|  477|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 477

 Score = 22.2 bits (45), Expect = 5.1
 Identities = 8/17 (47%), Positives = 10/17 (58%)
 Frame = +3

Query: 762 TRTASVASPTTPPGDYP 812
           T  AS++   TPP  YP
Sbjct: 82  THGASISPQNTPPAGYP 98



 Score = 21.4 bits (43), Expect = 9.0
 Identities = 6/11 (54%), Positives = 9/11 (81%)
 Frame = +2

Query: 173 CGGMDELPDVT 205
           CG  DE+PD++
Sbjct: 243 CGSHDEIPDIS 253


>EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock protein
           90 protein.
          Length = 721

 Score = 21.8 bits (44), Expect = 6.8
 Identities = 17/58 (29%), Positives = 27/58 (46%), Gaps = 1/58 (1%)
 Frame = +3

Query: 39  KKRISD-LKFVQNSEIVK*KLSQ*VVHQRRTVSNLIIEQTLTCNRRAEAWTSYLTLLM 209
           KKR  D  KF    +++K  L   V  ++  VSN ++E       R   WT+ +  +M
Sbjct: 548 KKREEDKAKFEGLCKVMKSILDNKV--EKVVVSNRLVESPCCITMRRYGWTANMERIM 603


>AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain
           transcription factor Maxillopediaprotein.
          Length = 523

 Score = 21.4 bits (43), Expect = 9.0
 Identities = 6/11 (54%), Positives = 9/11 (81%)
 Frame = +2

Query: 173 CGGMDELPDVT 205
           CG  DE+PD++
Sbjct: 112 CGSHDEIPDIS 122


>AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 471

 Score = 21.4 bits (43), Expect = 9.0
 Identities = 6/11 (54%), Positives = 9/11 (81%)
 Frame = +2

Query: 173 CGGMDELPDVT 205
           CG  DE+PD++
Sbjct: 60  CGSHDEIPDIS 70


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 182,410
Number of Sequences: 336
Number of extensions: 4094
Number of successful extensions: 16
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 22621642
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)