Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P01_F_L13
(825 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g03430.1 68418.m00296 phosphoadenosine phosphosulfate (PAPS) ... 132 2e-31
At1g62180.1 68414.m07014 5'-adenylylsulfate reductase 2, chlorop... 35 0.057
At4g21990.1 68417.m03183 5'-adenylylsulfate reductase (APR3) / P... 33 0.23
At4g04610.1 68417.m00674 5'-adenylylsulfate reductase (APR1) / P... 33 0.30
At3g48150.1 68416.m05251 cell division cycle family protein / CD... 29 2.8
At4g24120.1 68417.m03462 transporter, putative similar to iron-p... 29 5.0
At4g04320.2 68417.m00617 malonyl-CoA decarboxylase family protei... 28 6.5
At4g04320.1 68417.m00616 malonyl-CoA decarboxylase family protei... 28 6.5
At2g28840.1 68415.m03506 ankyrin repeat family protein contains ... 28 6.5
At1g24764.1 68414.m03106 expressed protein 28 6.5
>At5g03430.1 68418.m00296 phosphoadenosine phosphosulfate (PAPS)
reductase family protein low similarity to SP|P38913 FAD
synthetase (EC 2.7.7.2) {Saccharomyces cerevisiae};
contains Pfam profiles PF01507: Phosphoadenosine
phosphosulfate reductase family, PF00994: Probable
molybdopterin binding domain
Length = 497
Score = 132 bits (320), Expect = 2e-31
Identities = 72/204 (35%), Positives = 108/204 (52%), Gaps = 6/204 (2%)
Frame = +2
Query: 230 VIRQCFQTYALDEVFLCFNGGKDCTVLLDITIN--VLKDIYKSCDIGK----NLKVVYIR 391
VI++ Y+++EV FNGGKD TVLL + L ++C G ++ +Y
Sbjct: 25 VIKRALALYSIEEVAFSFNGGKDSTVLLHLLRAGYFLHKKEQTCSNGGLSSFPVRTIYFE 84
Query: 392 TKGPFVEIEKFVQEIKMYYGLTLKVTEGEMKETLQRLLEKDGILKAGLMGTRRSDPYSEN 571
+ F EI F + Y L L + + K L+ LL+ + I +A +G R DP +
Sbjct: 85 SPSAFTEINAFTYDAAQTYNLQLDIIRQDFKSGLEALLKANPI-RAIFLGVRIGDPTAVG 143
Query: 572 LQFVQKTDANWPQIMRISPLLNWSYHHIWSYILQRQVPYCSLYDKGYTSIGSTTNTWPNP 751
+ + WP MR++P+L+WSY +W+++L +V YCSLYD+GYTSIGS +T PN
Sbjct: 144 QEQFSPSSPGWPPFMRVNPILDWSYRDVWAFLLTCKVKYCSLYDQGYTSIGSIHDTVPNS 203
Query: 752 ALXHKDCFGCVTYHPAWRLSDASL 823
L D + PA+ LSD L
Sbjct: 204 LLSVNDTSSKEKFKPAYLLSDGRL 227
>At1g62180.1 68414.m07014 5'-adenylylsulfate reductase 2,
chloroplast (APR2) (APSR) / adenosine 5'-phosphosulfate
5'-adenylylsulfate (APS) sulfotransferase 2 /
3'-phosphoadenosine-5'-phosphosulfate (PAPS) reductase
homolog 43 (PRH-43) identical to SP|P92981
5'-adenylylsulfate reductase 2, chloroplast precursor
(EC 1.8.4.9) (Adenosine 5'-phosphosulfate
5'-adenylylsulfate sulfotransferase 2) (APS
sulfotransferase 2) (Thioredoxin independent APS
reductase 2) (3'-phosphoadenosine-5'-phosphosulfate
reductase homolog 43) (PAPS reductase homolog 43)
(Prh-43) {Arabidopsis thaliana}; identical to cDNA PAPS
reductase homolog (PRH43) GI:1710115
Length = 454
Score = 35.1 bits (77), Expect = 0.057
Identities = 19/69 (27%), Positives = 32/69 (46%)
Frame = +2
Query: 539 GTRRSDPYSENLQFVQKTDANWPQIMRISPLLNWSYHHIWSYILQRQVPYCSLYDKGYTS 718
GTR P + + D +++ +PL N +W+++ VP +L+ +GY S
Sbjct: 224 GTRSEIPIVQVDPVFEGLDGGVGSLVKWNPLANVEGADVWNFLRTMDVPVNALHAQGYVS 283
Query: 719 IGSTTNTWP 745
IG T P
Sbjct: 284 IGCEPCTRP 292
>At4g21990.1 68417.m03183 5'-adenylylsulfate reductase (APR3) / PAPS
reductase homolog (PRH26) identical to
5'-adenylylsulfate reductase [Arabidopsis thaliana]
GI:2738760; identical to cDNA PAPS reductase homolog
(PRH26) GI:1710113
Length = 458
Score = 33.1 bits (72), Expect = 0.23
Identities = 16/62 (25%), Positives = 30/62 (48%)
Frame = +2
Query: 539 GTRRSDPYSENLQFVQKTDANWPQIMRISPLLNWSYHHIWSYILQRQVPYCSLYDKGYTS 718
GTR P + + D +++ +P+ N + +W+++ VP +L+ GY S
Sbjct: 224 GTRSEIPVVQVDPVFEGLDGGVGSLVKWNPVANVEGNDVWNFLRTMDVPVNTLHAAGYVS 283
Query: 719 IG 724
IG
Sbjct: 284 IG 285
>At4g04610.1 68417.m00674 5'-adenylylsulfate reductase (APR1) / PAPS
reductase homolog (PRH19) identical to
5'-adenylylsulfate reductase [Arabidopsis thaliana]
GI:2738756; identical to cDNA PAPS reductase homolog
(PRH19) GI:1710111
Length = 465
Score = 32.7 bits (71), Expect = 0.30
Identities = 16/62 (25%), Positives = 30/62 (48%)
Frame = +2
Query: 539 GTRRSDPYSENLQFVQKTDANWPQIMRISPLLNWSYHHIWSYILQRQVPYCSLYDKGYTS 718
GTR P + + D +++ +P+ N + +W+++ VP +L+ GY S
Sbjct: 232 GTRSEIPVVQVDPVFEGLDGGVGSLVKWNPVANVEGNDVWNFLRTMDVPVNTLHAAGYIS 291
Query: 719 IG 724
IG
Sbjct: 292 IG 293
>At3g48150.1 68416.m05251 cell division cycle family protein / CDC
family protein similar to cell division cycle protein 23
[Homo sapiens] GI:3283051, anaphase-promoting complex
subunit 8 [Homo sapiens] GI:6180017; contains Pfam
profile PF00515: TPR Domain
Length = 579
Score = 29.5 bits (63), Expect = 2.8
Identities = 15/52 (28%), Positives = 27/52 (51%), Gaps = 3/52 (5%)
Frame = +2
Query: 239 QCFQT---YALDEVFLCFNGGKDCTVLLDITINVLKDIYKSCDIGKNLKVVY 385
+C+QT Y L+E C+ +CT I +N L +++ +G+N + Y
Sbjct: 449 KCYQTEQLYMLEEAIKCYKRAVNCTDTEGIALNQLAKLHQK--LGRNEEAAY 498
>At4g24120.1 68417.m03462 transporter, putative similar to
iron-phytosiderophore transporter protein yellow stripe
1 [Zea mays] GI:10770865; contains Pfam profile PF03169:
OPT oligopeptide transporter protein
Length = 665
Score = 28.7 bits (61), Expect = 5.0
Identities = 14/39 (35%), Positives = 19/39 (48%)
Frame = +2
Query: 620 ISPLLNWSYHHIWSYILQRQVPYCSLYDKGYTSIGSTTN 736
I P L W Y+ I +YI + +C+ Y G T I N
Sbjct: 403 IFPQLKW-YYVIVAYIFAPSLAFCNAYGAGLTDINMAYN 440
>At4g04320.2 68417.m00617 malonyl-CoA decarboxylase family protein
contains weak similarity to Malonyl-CoA decarboxylase,
mitochondrial precursor (EC 4.1.1.9) (MCD)
(Swiss-Prot:O95822) [Homo sapiens]; contains Pfam
profile PF05292: Malonyl-CoA decarboxylase (MCD)
Length = 517
Score = 28.3 bits (60), Expect = 6.5
Identities = 16/59 (27%), Positives = 30/59 (50%)
Frame = +2
Query: 302 TVLLDITINVLKDIYKSCDIGKNLKVVYIRTKGPFVEIEKFVQEIKMYYGLTLKVTEGE 478
T +LDIT+N ++ Y S + K++ + K V E+ + +K Y GL ++ +
Sbjct: 73 TGVLDITLNDFQEGYFSLSLEDREKLLLVLAKEYDVNREQVRELVKQYLGLETPASDDD 131
>At4g04320.1 68417.m00616 malonyl-CoA decarboxylase family protein
contains weak similarity to Malonyl-CoA decarboxylase,
mitochondrial precursor (EC 4.1.1.9) (MCD)
(Swiss-Prot:O95822) [Homo sapiens]; contains Pfam
profile PF05292: Malonyl-CoA decarboxylase (MCD)
Length = 518
Score = 28.3 bits (60), Expect = 6.5
Identities = 16/59 (27%), Positives = 30/59 (50%)
Frame = +2
Query: 302 TVLLDITINVLKDIYKSCDIGKNLKVVYIRTKGPFVEIEKFVQEIKMYYGLTLKVTEGE 478
T +LDIT+N ++ Y S + K++ + K V E+ + +K Y GL ++ +
Sbjct: 74 TGVLDITLNDFQEGYFSLSLEDREKLLLVLAKEYDVNREQVRELVKQYLGLETPASDDD 132
>At2g28840.1 68415.m03506 ankyrin repeat family protein contains
ankyrin repeats, Pfam:PF00023
Length = 456
Score = 28.3 bits (60), Expect = 6.5
Identities = 9/33 (27%), Positives = 16/33 (48%)
Frame = -2
Query: 749 DSATCSLCFLSTCTLYRRDCSTALVVAICSSIC 651
D+ C +CF CT+ +DC + ++C
Sbjct: 315 DTELCCICFEQVCTIEVKDCGHQMCAQCTLALC 347
>At1g24764.1 68414.m03106 expressed protein
Length = 607
Score = 28.3 bits (60), Expect = 6.5
Identities = 18/63 (28%), Positives = 34/63 (53%), Gaps = 2/63 (3%)
Frame = +1
Query: 490 VTEAIREGRNIEGRLDGNETERSLQREFAI-CSENGCELASDNENISAIELVLSP-HMEL 663
+TE+I E +N+E + E + S+ +FA + A ++++ IE +L+P EL
Sbjct: 131 LTESILESKNLEIKKINEEKKASMAAQFAAEATLRRVHAAQKDDDMPPIEAILAPLEAEL 190
Query: 664 HIA 672
+A
Sbjct: 191 KLA 193
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,601,418
Number of Sequences: 28952
Number of extensions: 338944
Number of successful extensions: 1040
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1004
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1039
length of database: 12,070,560
effective HSP length: 80
effective length of database: 9,754,400
effective search space used: 1892353600
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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