Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P01_F_L12
         (782 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC031695-1|AAH31695.1|  203|Homo sapiens deleted in a mouse mode...   116   1e-25
BC001082-1|AAH01082.2|  203|Homo sapiens deleted in a mouse mode...   116   1e-25
AY532267-1|AAS46252.1|  200|Homo sapiens DPCD protein.                116   1e-25
AL627424-15|CAI41040.1|  203|Homo sapiens novel protein protein.      116   1e-25
AL627424-14|CAI41039.1|  170|Homo sapiens novel protein protein.      116   1e-25
AL627424-16|CAI41041.1|  116|Homo sapiens novel protein protein.       85   4e-16
DQ109808-1|AAZ83370.1| 2479|Homo sapiens nephrocystin-6 protein.       31   3.5  
AY590151-1|AAT01278.1|  534|Homo sapiens prostate cancer antigen...    31   3.5  
AK025632-1|BAB15196.1|  720|Homo sapiens protein ( Homo sapiens ...    31   3.5  

>BC031695-1|AAH31695.1|  203|Homo sapiens deleted in a mouse model
           of primary ciliary dyskinesia protein.
          Length = 203

 Score =  116 bits (278), Expect = 1e-25
 Identities = 51/118 (43%), Positives = 73/118 (61%)
 Frame = +3

Query: 429 TIWYHTLLDAEKSCLKEEKVKKIHYKFEDGREMVEEYNVDTQVLLRRAWKVKGKLGGEGK 608
           T W  +L  A+K+ L ++  +K+HY F DG+EM EEY+  T  LL R W+VK  LG  G+
Sbjct: 4   TGWLESLRTAQKTALLQDGRRKVHYLFPDGKEMAEEYDEKTSELLVRKWRVKSALGAMGQ 63

Query: 609 WHVEIGDPIPDAISNSDCAEITECKDQPQVFRRNTRINLEWRIRNLPYPIETYSISAN 782
           W +E+GDP P    N     I E    P   R++T+++ +WRIRNLPYP + YS+S +
Sbjct: 64  WQLEVGDPAPLGAGNLGPELIKESNANPIFMRKDTKMSFQWRIRNLPYPKDVYSVSVD 121


>BC001082-1|AAH01082.2|  203|Homo sapiens deleted in a mouse model
           of primary ciliary dyskinesia protein.
          Length = 203

 Score =  116 bits (278), Expect = 1e-25
 Identities = 51/118 (43%), Positives = 73/118 (61%)
 Frame = +3

Query: 429 TIWYHTLLDAEKSCLKEEKVKKIHYKFEDGREMVEEYNVDTQVLLRRAWKVKGKLGGEGK 608
           T W  +L  A+K+ L ++  +K+HY F DG+EM EEY+  T  LL R W+VK  LG  G+
Sbjct: 4   TGWLESLRTAQKTALLQDGRRKVHYLFPDGKEMAEEYDEKTSELLVRKWRVKSALGAMGQ 63

Query: 609 WHVEIGDPIPDAISNSDCAEITECKDQPQVFRRNTRINLEWRIRNLPYPIETYSISAN 782
           W +E+GDP P    N     I E    P   R++T+++ +WRIRNLPYP + YS+S +
Sbjct: 64  WQLEVGDPAPLGAGNLGPELIKESNANPIFMRKDTKMSFQWRIRNLPYPKDVYSVSVD 121


>AY532267-1|AAS46252.1|  200|Homo sapiens DPCD protein.
          Length = 200

 Score =  116 bits (278), Expect = 1e-25
 Identities = 51/118 (43%), Positives = 73/118 (61%)
 Frame = +3

Query: 429 TIWYHTLLDAEKSCLKEEKVKKIHYKFEDGREMVEEYNVDTQVLLRRAWKVKGKLGGEGK 608
           T W  +L  A+K+ L ++  +K+HY F DG+EM EEY+  T  LL R W+VK  LG  G+
Sbjct: 1   TGWLESLRTAQKTALLQDGRRKVHYLFPDGKEMAEEYDEKTSELLVRKWRVKSALGAMGQ 60

Query: 609 WHVEIGDPIPDAISNSDCAEITECKDQPQVFRRNTRINLEWRIRNLPYPIETYSISAN 782
           W +E+GDP P    N     I E    P   R++T+++ +WRIRNLPYP + YS+S +
Sbjct: 61  WQLEVGDPAPLGAGNLGPELIKESNANPIFMRKDTKMSFQWRIRNLPYPKDVYSVSVD 118


>AL627424-15|CAI41040.1|  203|Homo sapiens novel protein protein.
          Length = 203

 Score =  116 bits (278), Expect = 1e-25
 Identities = 51/118 (43%), Positives = 73/118 (61%)
 Frame = +3

Query: 429 TIWYHTLLDAEKSCLKEEKVKKIHYKFEDGREMVEEYNVDTQVLLRRAWKVKGKLGGEGK 608
           T W  +L  A+K+ L ++  +K+HY F DG+EM EEY+  T  LL R W+VK  LG  G+
Sbjct: 4   TGWLESLRTAQKTALLQDGRRKVHYLFPDGKEMAEEYDEKTSELLVRKWRVKSALGAMGQ 63

Query: 609 WHVEIGDPIPDAISNSDCAEITECKDQPQVFRRNTRINLEWRIRNLPYPIETYSISAN 782
           W +E+GDP P    N     I E    P   R++T+++ +WRIRNLPYP + YS+S +
Sbjct: 64  WQLEVGDPAPLGAGNLGPELIKESNANPIFMRKDTKMSFQWRIRNLPYPKDVYSVSVD 121


>AL627424-14|CAI41039.1|  170|Homo sapiens novel protein protein.
          Length = 170

 Score =  116 bits (278), Expect = 1e-25
 Identities = 51/118 (43%), Positives = 73/118 (61%)
 Frame = +3

Query: 429 TIWYHTLLDAEKSCLKEEKVKKIHYKFEDGREMVEEYNVDTQVLLRRAWKVKGKLGGEGK 608
           T W  +L  A+K+ L ++  +K+HY F DG+EM EEY+  T  LL R W+VK  LG  G+
Sbjct: 4   TGWLESLRTAQKTALLQDGRRKVHYLFPDGKEMAEEYDEKTSELLVRKWRVKSALGAMGQ 63

Query: 609 WHVEIGDPIPDAISNSDCAEITECKDQPQVFRRNTRINLEWRIRNLPYPIETYSISAN 782
           W +E+GDP P    N     I E    P   R++T+++ +WRIRNLPYP + YS+S +
Sbjct: 64  WQLEVGDPAPLGAGNLGPELIKESNANPIFMRKDTKMSFQWRIRNLPYPKDVYSVSVD 121


>AL627424-16|CAI41041.1|  116|Homo sapiens novel protein protein.
          Length = 116

 Score = 84.6 bits (200), Expect = 4e-16
 Identities = 37/84 (44%), Positives = 51/84 (60%)
 Frame = +3

Query: 531 EEYNVDTQVLLRRAWKVKGKLGGEGKWHVEIGDPIPDAISNSDCAEITECKDQPQVFRRN 710
           EEY+  T  LL R W+VK  LG  G+W +E+GDP P    N     I E    P   R++
Sbjct: 2   EEYDEKTSELLVRKWRVKSALGAMGQWQLEVGDPAPLGAGNLGPELIKESNANPIFMRKD 61

Query: 711 TRINLEWRIRNLPYPIETYSISAN 782
           T+++ +WRIRNLPYP + YS+S +
Sbjct: 62  TKMSFQWRIRNLPYPKDVYSVSVD 85


>DQ109808-1|AAZ83370.1| 2479|Homo sapiens nephrocystin-6 protein.
          Length = 2479

 Score = 31.5 bits (68), Expect = 3.5
 Identities = 21/75 (28%), Positives = 38/75 (50%)
 Frame = +3

Query: 318  LETMKRKTCLIETFESCENYDKKHRNIQSGTATMYKNTIWYHTLLDAEKSCLKEEKVKKI 497
            LE  ++K   +E  +S E+Y++K   I+   + +YK  +        E   +KEEK +K+
Sbjct: 791  LENKEKKLKNLE--DSLEDYNRKFAVIRHQQSLLYKEYLSEKETWKTESKTIKEEK-RKL 847

Query: 498  HYKFEDGREMVEEYN 542
              + +     V+EYN
Sbjct: 848  EDQVQQDAIKVKEYN 862


>AY590151-1|AAT01278.1|  534|Homo sapiens prostate cancer antigen
           T21 protein.
          Length = 534

 Score = 31.5 bits (68), Expect = 3.5
 Identities = 21/75 (28%), Positives = 38/75 (50%)
 Frame = +3

Query: 318 LETMKRKTCLIETFESCENYDKKHRNIQSGTATMYKNTIWYHTLLDAEKSCLKEEKVKKI 497
           LE  ++K   +E  +S E+Y++K   I+   + +YK  +        E   +KEEK +K+
Sbjct: 221 LENKEKKLKNLE--DSLEDYNRKFAVIRHQQSLLYKEYLSEKETWKTESKTIKEEK-RKL 277

Query: 498 HYKFEDGREMVEEYN 542
             + +     V+EYN
Sbjct: 278 EDQVQQDAIKVKEYN 292


>AK025632-1|BAB15196.1|  720|Homo sapiens protein ( Homo sapiens
           cDNA: FLJ21979 fis, clone HEP06065. ).
          Length = 720

 Score = 31.5 bits (68), Expect = 3.5
 Identities = 21/75 (28%), Positives = 38/75 (50%)
 Frame = +3

Query: 318 LETMKRKTCLIETFESCENYDKKHRNIQSGTATMYKNTIWYHTLLDAEKSCLKEEKVKKI 497
           LE  ++K   +E  +S E+Y++K   I+   + +YK  +        E   +KEEK +K+
Sbjct: 426 LENKEKKLKNLE--DSLEDYNRKFAVIRHQQSLLYKEYLSEKETWKTESKTIKEEK-RKL 482

Query: 498 HYKFEDGREMVEEYN 542
             + +     V+EYN
Sbjct: 483 EDQVQQDAIKVKEYN 497


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 98,161,616
Number of Sequences: 237096
Number of extensions: 1887687
Number of successful extensions: 7407
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 7297
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7407
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9534535578
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)