Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P01_F_L09
         (505 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ855492-1|ABH88179.1|  251|Tribolium castaneum chemosensory pro...    30   0.014
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    22   3.6  
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    22   3.6  
AJ457831-1|CAD29886.1|  249|Tribolium castaneum helix-loop-helix...    21   4.7  
AJ223627-1|CAA11500.1|  371|Tribolium castaneum orthodenticle-1 ...    21   6.3  
EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine vasopre...    21   8.3  
AM292351-1|CAL23163.2|  394|Tribolium castaneum gustatory recept...    21   8.3  
AM292350-1|CAL23162.2|  429|Tribolium castaneum gustatory recept...    21   8.3  
AM292328-1|CAL23140.2|  429|Tribolium castaneum gustatory recept...    21   8.3  

>DQ855492-1|ABH88179.1|  251|Tribolium castaneum chemosensory
           protein 6 protein.
          Length = 251

 Score = 29.9 bits (64), Expect = 0.014
 Identities = 25/81 (30%), Positives = 31/81 (38%)
 Frame = +2

Query: 83  RPSGQIQLRHHPXKATSNSTTRPATEFTPRLKVPSRTSTQNTPPSKLRVPTSTLPLTDNP 262
           +PSG I     P     ++      E      V S T    T  +  R  T T   T  P
Sbjct: 123 KPSGVISTNTSPPSPILSNRFGENEEADAASNVISSTPLPPTTSTTTRT-TLTTKFTTKP 181

Query: 263 STSPTSLTRTVTNPREAICPP 325
           ST PT+    VT P +A  PP
Sbjct: 182 STKPTNKPVVVTKPPQA--PP 200


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 21.8 bits (44), Expect = 3.6
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = +2

Query: 110  HHPXKATSNSTTRPAT 157
            H   K T+++TTRP T
Sbjct: 1182 HWQTKTTTSTTTRPTT 1197


>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
            adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 21.8 bits (44), Expect = 3.6
 Identities = 13/40 (32%), Positives = 19/40 (47%)
 Frame = +1

Query: 226  GAYKYTSPDGQPIDLAYVADENGYQPQGSHLPTPHPIPEA 345
            G  KYT+   +   LAY +  +G +    H  T   +PEA
Sbjct: 1166 GLKKYTNYSMEV--LAYTSGGDGVRTTPIHCQTEQDVPEA 1203


>AJ457831-1|CAD29886.1|  249|Tribolium castaneum helix-loop-helix
           transcription factor protein.
          Length = 249

 Score = 21.4 bits (43), Expect = 4.7
 Identities = 12/45 (26%), Positives = 16/45 (35%)
 Frame = +1

Query: 265 DLAYVADENGYQPQGSHLPTPHPIPEAIARALAYIEAHPPSPSVV 399
           D+A V    G  P    +P P       + A  Y  +  P P  V
Sbjct: 183 DIALVLPTQGASPLPLLVPIPQRTASTASSASNYSPSQSPEPESV 227



 Score = 20.6 bits (41), Expect = 8.3
 Identities = 11/38 (28%), Positives = 15/38 (39%)
 Frame = +2

Query: 191 TSTQNTPPSKLRVPTSTLPLTDNPSTSPTSLTRTVTNP 304
           T T NTP     +PT+   +    +T   S  R    P
Sbjct: 3   TGTNNTPVQPNAIPTTNNQIEMAAATKRVSDNRRSNKP 40


>AJ223627-1|CAA11500.1|  371|Tribolium castaneum orthodenticle-1
           protein protein.
          Length = 371

 Score = 21.0 bits (42), Expect = 6.3
 Identities = 8/15 (53%), Positives = 9/15 (60%)
 Frame = +3

Query: 357 SCLHRGPPPQPLRRG 401
           SCL   PPP+   RG
Sbjct: 32  SCLKTTPPPEEDNRG 46


>EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine
           vasopressin receptor protein.
          Length = 403

 Score = 20.6 bits (41), Expect = 8.3
 Identities = 11/27 (40%), Positives = 13/27 (48%)
 Frame = +2

Query: 251 TDNPSTSPTSLTRTVTNPREAICPPLT 331
           T  P  S   L  T  +  +AIC PLT
Sbjct: 121 TLGPYLSSYVLMATAIDRHQAICYPLT 147


>AM292351-1|CAL23163.2|  394|Tribolium castaneum gustatory receptor
           candidate 30 protein.
          Length = 394

 Score = 20.6 bits (41), Expect = 8.3
 Identities = 10/35 (28%), Positives = 16/35 (45%)
 Frame = +2

Query: 188 RTSTQNTPPSKLRVPTSTLPLTDNPSTSPTSLTRT 292
           R    NTPP K ++ T+      N S    +L ++
Sbjct: 2   RVQPSNTPPEKSQLSTADTANLINKSLGKHNLQKS 36


>AM292350-1|CAL23162.2|  429|Tribolium castaneum gustatory receptor
           candidate 29 protein.
          Length = 429

 Score = 20.6 bits (41), Expect = 8.3
 Identities = 10/35 (28%), Positives = 16/35 (45%)
 Frame = +2

Query: 188 RTSTQNTPPSKLRVPTSTLPLTDNPSTSPTSLTRT 292
           R    NTPP K ++ T+      N S    +L ++
Sbjct: 2   RVQPSNTPPEKSQLSTADTANLINKSLGKHNLQKS 36


>AM292328-1|CAL23140.2|  429|Tribolium castaneum gustatory receptor
           candidate 7 protein.
          Length = 429

 Score = 20.6 bits (41), Expect = 8.3
 Identities = 10/35 (28%), Positives = 16/35 (45%)
 Frame = +2

Query: 188 RTSTQNTPPSKLRVPTSTLPLTDNPSTSPTSLTRT 292
           R    NTPP K ++ T+      N S    +L ++
Sbjct: 2   RVQPSNTPPEKSQLSTADTANLINKSLGKHNLQKS 36


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 106,822
Number of Sequences: 336
Number of extensions: 2313
Number of successful extensions: 14
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 11944578
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)