Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P01_F_L09
(505 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
EF531707-1|ABP57431.1| 138|Apis mellifera structural cuticle pr... 95 3e-22
DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholi... 23 1.4
DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholi... 23 1.4
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso... 22 3.2
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein. 22 3.2
AY569702-1|AAS86655.1| 400|Apis mellifera feminizer protein. 22 4.2
AY336529-1|AAQ02340.1| 712|Apis mellifera transferrin protein. 22 4.2
AY336528-1|AAQ02339.1| 712|Apis mellifera transferrin protein. 22 4.2
AY268031-1|AAP23056.1| 810|Apis mellifera dorsal protein splice... 22 4.2
AY217097-1|AAO39761.1| 712|Apis mellifera transferrin protein. 22 4.2
AB267886-1|BAF46356.1| 567|Apis mellifera ecdysteroid receptor ... 21 7.3
AY340960-1|AAQ16586.1| 78|Apis mellifera apisimin precursor pr... 21 9.6
AY055108-1|AAL15544.1| 78|Apis mellifera apisimin precursor pr... 21 9.6
AB264313-1|BAF43600.1| 900|Apis mellifera ecdysone-induced prot... 21 9.6
AB207270-1|BAE72137.1| 429|Apis mellifera broad-complex protein. 21 9.6
>EF531707-1|ABP57431.1| 138|Apis mellifera structural cuticle
protein protein.
Length = 138
Score = 95.5 bits (227), Expect = 3e-22
Identities = 44/86 (51%), Positives = 58/86 (67%)
Frame = +1
Query: 124 GHFQFNYETGNGIYAQAEGAVKNVNSEYPAIEVKGAYKYTSPDGQPIDLAYVADENGYQP 303
G++ N+ET NGI Q G K V++E P + +G+ YT+PDGQ + + YVADENG+Q
Sbjct: 40 GNYINNFETSNGISHQESGQPKQVDNETPVVS-QGSDSYTAPDGQQVSITYVADENGFQV 98
Query: 304 QGSHLPTPHPIPEAIARALAYIEAHP 381
QGSH+PT PIP I RAL + AHP
Sbjct: 99 QGSHIPTAPPIPPEIQRALEWNAAHP 124
>DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 23.4 bits (48), Expect = 1.4
Identities = 13/25 (52%), Positives = 14/25 (56%), Gaps = 3/25 (12%)
Frame = +3
Query: 327 SPNSRGDRPR---SCLHRGPPPQPL 392
SP+S D R SCL GPP PL
Sbjct: 420 SPSSLADGARFGGSCLIHGPPLPPL 444
Score = 22.2 bits (45), Expect = 3.2
Identities = 10/29 (34%), Positives = 15/29 (51%)
Frame = +3
Query: 15 PRPSRSRCASADVSHIAKSDEYAAPVVKS 101
P P + C VS A +E +PV++S
Sbjct: 443 PLPLHTECEDLSVSGEAGIEEVKSPVLRS 471
>DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 23.4 bits (48), Expect = 1.4
Identities = 13/25 (52%), Positives = 14/25 (56%), Gaps = 3/25 (12%)
Frame = +3
Query: 327 SPNSRGDRPR---SCLHRGPPPQPL 392
SP+S D R SCL GPP PL
Sbjct: 420 SPSSLADGARFGGSCLIHGPPLPPL 444
Score = 22.2 bits (45), Expect = 3.2
Identities = 10/29 (34%), Positives = 15/29 (51%)
Frame = +3
Query: 15 PRPSRSRCASADVSHIAKSDEYAAPVVKS 101
P P + C VS A +E +PV++S
Sbjct: 443 PLPLHTECEDLSVSGEAGIEEVKSPVLRS 471
>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
protein.
Length = 1770
Score = 22.2 bits (45), Expect = 3.2
Identities = 12/37 (32%), Positives = 17/37 (45%)
Frame = +2
Query: 194 STQNTPPSKLRVPTSTLPLTDNPSTSPTSLTRTVTNP 304
S N +K+ + LP+ DNP S +L NP
Sbjct: 293 SRMNLTLAKMEKTSKPLPMVDNPE-STGNLVYIYNNP 328
>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
Length = 1598
Score = 22.2 bits (45), Expect = 3.2
Identities = 13/38 (34%), Positives = 19/38 (50%), Gaps = 1/38 (2%)
Frame = +1
Query: 247 PDGQP-IDLAYVADENGYQPQGSHLPTPHPIPEAIARA 357
P+ P +DL+ + G GS T P P +I+RA
Sbjct: 1369 PERVPTVDLSPSPSDRGRNDDGSDRLTSPPTPLSISRA 1406
>AY569702-1|AAS86655.1| 400|Apis mellifera feminizer protein.
Length = 400
Score = 21.8 bits (44), Expect = 4.2
Identities = 10/17 (58%), Positives = 11/17 (64%)
Frame = -1
Query: 55 ETSALAQRDRDGRGQYR 5
ETS RDR GRG+ R
Sbjct: 309 ETSRERSRDRRGRGRSR 325
>AY336529-1|AAQ02340.1| 712|Apis mellifera transferrin protein.
Length = 712
Score = 21.8 bits (44), Expect = 4.2
Identities = 12/32 (37%), Positives = 14/32 (43%), Gaps = 2/32 (6%)
Frame = +1
Query: 178 GAVKNVNSEYPAIEVKGAYKYTSPDGQ--PID 267
G V + P E Y+Y PDG PID
Sbjct: 264 GLPVGVTAAIPTSENPADYRYFCPDGSKVPID 295
>AY336528-1|AAQ02339.1| 712|Apis mellifera transferrin protein.
Length = 712
Score = 21.8 bits (44), Expect = 4.2
Identities = 12/32 (37%), Positives = 14/32 (43%), Gaps = 2/32 (6%)
Frame = +1
Query: 178 GAVKNVNSEYPAIEVKGAYKYTSPDGQ--PID 267
G V + P E Y+Y PDG PID
Sbjct: 264 GLPVGVTAAIPTSENPADYRYFCPDGSKVPID 295
>AY268031-1|AAP23056.1| 810|Apis mellifera dorsal protein splice
variant B protein.
Length = 810
Score = 21.8 bits (44), Expect = 4.2
Identities = 9/23 (39%), Positives = 11/23 (47%)
Frame = +2
Query: 179 VPSRTSTQNTPPSKLRVPTSTLP 247
+P S TP S + P TLP
Sbjct: 654 LPRPISCHTTPDSFIEAPNKTLP 676
>AY217097-1|AAO39761.1| 712|Apis mellifera transferrin protein.
Length = 712
Score = 21.8 bits (44), Expect = 4.2
Identities = 12/32 (37%), Positives = 14/32 (43%), Gaps = 2/32 (6%)
Frame = +1
Query: 178 GAVKNVNSEYPAIEVKGAYKYTSPDGQ--PID 267
G V + P E Y+Y PDG PID
Sbjct: 264 GLPVGVTAAIPTSENPADYRYFCPDGSKVPID 295
>AB267886-1|BAF46356.1| 567|Apis mellifera ecdysteroid receptor A
isoform protein.
Length = 567
Score = 21.0 bits (42), Expect = 7.3
Identities = 9/30 (30%), Positives = 16/30 (53%)
Frame = +3
Query: 21 PSRSRCASADVSHIAKSDEYAAPVVKSSYD 110
P + + A+ ++ YA+P+ SSYD
Sbjct: 113 PQQQQLAAETQQQQQHNNGYASPMSTSSYD 142
>AY340960-1|AAQ16586.1| 78|Apis mellifera apisimin precursor
protein.
Length = 78
Score = 20.6 bits (41), Expect = 9.6
Identities = 9/18 (50%), Positives = 12/18 (66%)
Frame = -2
Query: 297 VTVLVSDVGEVDGLSVRG 244
V +LVSDV +SV+G
Sbjct: 15 VAMLVSDVSAKTSISVKG 32
>AY055108-1|AAL15544.1| 78|Apis mellifera apisimin precursor
protein.
Length = 78
Score = 20.6 bits (41), Expect = 9.6
Identities = 9/18 (50%), Positives = 12/18 (66%)
Frame = -2
Query: 297 VTVLVSDVGEVDGLSVRG 244
V +LVSDV +SV+G
Sbjct: 15 VAMLVSDVSAKTSISVKG 32
>AB264313-1|BAF43600.1| 900|Apis mellifera ecdysone-induced protein
75 protein.
Length = 900
Score = 20.6 bits (41), Expect = 9.6
Identities = 11/35 (31%), Positives = 13/35 (37%)
Frame = +2
Query: 158 EFTPRLKVPSRTSTQNTPPSKLRVPTSTLPLTDNP 262
+FT P + TP PT PL NP
Sbjct: 191 DFTRDKVAPILVRARETPNYTACPPTLACPLNPNP 225
>AB207270-1|BAE72137.1| 429|Apis mellifera broad-complex protein.
Length = 429
Score = 20.6 bits (41), Expect = 9.6
Identities = 9/33 (27%), Positives = 17/33 (51%)
Frame = +1
Query: 307 GSHLPTPHPIPEAIARALAYIEAHPPSPSVVER 405
G+HLP + E+ R + P+P+ V++
Sbjct: 137 GNHLPFHEKLVESFPRGGSLPTPVTPTPTTVQQ 169
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 134,377
Number of Sequences: 438
Number of extensions: 3231
Number of successful extensions: 18
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 13864083
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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