Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P01_F_L09
(505 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g50580.1 68416.m05532 proline-rich family protein contains pr... 38 0.005
At3g60280.1 68416.m06738 uclacyanin 3 (UCC3) identical to uclacy... 36 0.020
At4g18670.1 68417.m02762 leucine-rich repeat family protein / ex... 35 0.036
At2g18470.1 68415.m02151 protein kinase family protein contains ... 34 0.063
At1g31870.1 68414.m03917 expressed protein 33 0.083
At1g55610.1 68414.m06365 protein kinase family protein contains ... 33 0.11
At5g14920.1 68418.m01750 gibberellin-regulated family protein si... 33 0.14
At2g40180.1 68415.m04941 protein phosphatase 2C, putative / PP2C... 33 0.14
At1g62760.1 68414.m07083 invertase/pectin methylesterase inhibit... 33 0.14
At1g05800.1 68414.m00606 lipase class 3 family protein similar t... 33 0.14
At5g10430.1 68418.m01209 arabinogalactan-protein (AGP4) identica... 32 0.19
At3g22120.1 68416.m02792 protease inhibitor/seed storage/lipid t... 32 0.19
At4g12500.1 68417.m01975 protease inhibitor/seed storage/lipid t... 31 0.33
At1g35230.1 68414.m04369 arabinogalactan-protein (AGP5) identica... 31 0.33
At4g35800.1 68417.m05087 DNA-directed RNA polymerase II largest ... 31 0.44
At4g26910.3 68417.m03871 2-oxoacid dehydrogenase family protein ... 31 0.44
At4g26910.2 68417.m03873 2-oxoacid dehydrogenase family protein ... 31 0.44
At4g26910.1 68417.m03872 2-oxoacid dehydrogenase family protein ... 31 0.44
At2g18490.1 68415.m02155 zinc finger (C2H2 type) family protein ... 31 0.44
At2g16630.1 68415.m01909 proline-rich family protein contains pr... 31 0.44
At3g24550.1 68416.m03083 protein kinase family protein contains ... 31 0.58
At2g42840.2 68415.m05305 protodermal factor 1 (PDF1) identical t... 31 0.58
At2g42840.1 68415.m05304 protodermal factor 1 (PDF1) identical t... 31 0.58
At5g20750.1 68418.m02466 Ulp1 protease family protein contains P... 30 0.77
At4g39140.4 68417.m05544 expressed protein 30 0.77
At4g39140.3 68417.m05543 expressed protein 30 0.77
At4g39140.2 68417.m05542 expressed protein 30 0.77
At4g39140.1 68417.m05541 expressed protein 30 0.77
At4g37450.1 68417.m05301 arabinogalactan-protein (AGP18) identic... 30 0.77
At4g32020.1 68417.m04558 expressed protein NuLL 30 0.77
At1g69295.1 68414.m07947 beta-1,3-glucanase-related low similari... 30 0.77
At5g14540.1 68418.m01704 proline-rich family protein contains pr... 30 1.0
At1g56210.1 68414.m06460 copper chaperone (CCH)-related low simi... 30 1.0
At5g52890.1 68418.m06564 AT hook motif-containing protein contai... 29 1.3
At5g19920.1 68418.m02370 transducin family protein / WD-40 repea... 29 1.3
At5g38560.1 68418.m04662 protein kinase family protein contains ... 29 1.8
At2g39720.1 68415.m04874 zinc finger (C3HC4-type RING finger) fa... 29 1.8
At4g14150.1 68417.m02183 phragmoplast-associated kinesin-related... 29 2.4
At4g03090.1 68417.m00417 expressed protein 29 2.4
At2g22680.1 68415.m02688 zinc finger (C3HC4-type RING finger) fa... 29 2.4
At1g62500.1 68414.m07052 protease inhibitor/seed storage/lipid t... 28 3.1
At1g01320.1 68414.m00048 tetratricopeptide repeat (TPR)-containi... 28 3.1
At4g00890.1 68417.m00120 proline-rich family protein contains pr... 28 4.1
At3g28790.1 68416.m03593 expressed protein 28 4.1
At3g13380.1 68416.m01683 leucine-rich repeat family protein / pr... 28 4.1
At1g64080.1 68414.m07259 expressed protein identical to hypothet... 28 4.1
At1g26450.1 68414.m03226 beta-1,3-glucanase-related similar to b... 28 4.1
At1g10620.1 68414.m01204 protein kinase family protein contains ... 28 4.1
At5g27870.1 68418.m03343 pectinesterase family protein similar t... 27 5.4
At3g59550.1 68416.m06646 cohesion family protein SYN3 (SYN3) nea... 27 5.4
At3g19430.1 68416.m02464 late embryogenesis abundant protein-rel... 27 5.4
At2g20310.1 68415.m02372 expressed protein 27 5.4
At1g28200.1 68414.m03461 GRAM domain-containing protein / ABA-re... 27 5.4
At1g09460.1 68414.m01058 glucan endo-1,3-beta-glucosidase-relate... 27 5.4
At5g58160.1 68418.m07280 formin homology 2 domain-containing pro... 27 7.2
At5g22990.1 68418.m02687 zinc finger (C2H2 type) family protein ... 27 7.2
At3g10070.1 68416.m01207 transcription initiation factor IID (TF... 27 7.2
At2g40070.1 68415.m04923 expressed protein 27 7.2
At2g29780.1 68415.m03618 kelch repeat-containing F-box family pr... 27 7.2
At2g18050.1 68415.m02098 histone H1-3 (HIS1-3) similar to histon... 27 7.2
At2g14890.2 68415.m01692 arabinogalactan-protein (AGP9) identica... 27 7.2
At2g14890.1 68415.m01693 arabinogalactan-protein (AGP9) identica... 27 7.2
At2g12940.1 68415.m01419 expressed protein 27 7.2
At1g72160.1 68414.m08343 SEC14 cytosolic factor family protein /... 27 7.2
At1g23540.1 68414.m02960 protein kinase family protein contains ... 27 7.2
At5g53870.1 68418.m06701 plastocyanin-like domain-containing pro... 27 9.5
At5g51800.1 68418.m06423 expressed protein 27 9.5
At5g41620.1 68418.m05057 expressed protein weak similarity to mi... 27 9.5
At5g25270.1 68418.m02996 expressed protein 27 9.5
At4g01810.1 68417.m00238 protein transport protein-related relat... 27 9.5
At3g02540.2 68416.m00243 ubiquitin family protein contains Pfam ... 27 9.5
At3g02540.1 68416.m00242 ubiquitin family protein contains Pfam ... 27 9.5
At2g15740.1 68415.m01802 zinc finger (C2H2 type) family protein ... 27 9.5
At1g80490.2 68414.m09430 WD-40 repeat family protein contains 9 ... 27 9.5
At1g80490.1 68414.m09429 WD-40 repeat family protein contains 9 ... 27 9.5
At1g30320.1 68414.m03708 remorin family protein contains Pfam do... 27 9.5
At1g26150.1 68414.m03192 protein kinase family protein similar t... 27 9.5
>At3g50580.1 68416.m05532 proline-rich family protein contains
proline-rich extensin domains, INTERPRO:IPR002965
Length = 265
Score = 37.5 bits (83), Expect = 0.005
Identities = 25/72 (34%), Positives = 36/72 (50%), Gaps = 2/72 (2%)
Frame = +2
Query: 122 KATSNSTTRPATEFTPRLKVPSRTSTQNTPPSKLRVPTSTLPLTDNPSTSPTSLTRTVTN 301
K T ++ + PA +P +PS ST + PP + S P T S SP SLT V +
Sbjct: 62 KCTYSNGSAPAISISPSTPIPSTPSTPSPPPPAPK--KSPPPPTPKKSPSPPSLTPFVPH 119
Query: 302 --PREAICPPLT 331
P+++ PP T
Sbjct: 120 PTPKKSPSPPPT 131
>At3g60280.1 68416.m06738 uclacyanin 3 (UCC3) identical to
uclacyanin 3 GI:3395770 from [Arabidopsis thaliana];
contains Pfam profile PF02298: Plastocyanin-like domain;
identical to cDNA uclacyanin 3 (UCC3)GI:3395769
Length = 222
Score = 35.5 bits (78), Expect = 0.020
Identities = 24/72 (33%), Positives = 38/72 (52%), Gaps = 5/72 (6%)
Frame = +2
Query: 131 SNSTTRPATEFTPRLKVPSRTSTQNTPPS-----KLRVPTSTLPLTDNPSTSPTSLTRTV 295
S ++ P+T TP PS ST ++PPS +P S+LP + +P T+ T + T+
Sbjct: 126 STPSSPPSTPSTPS-SPPSTPSTPSSPPSPPSPPSPSLPPSSLPPSASPPTNGTPDSETL 184
Query: 296 TNPREAICPPLT 331
T P + P L+
Sbjct: 185 TPPPAPLPPSLS 196
>At4g18670.1 68417.m02762 leucine-rich repeat family protein /
extensin family protein similar to extensin-like protein
[Lycopersicon esculentum] gi|5917664|gb|AAD55979;
contains leucine-rich repeats, Pfam:PF00560; contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 839
Score = 34.7 bits (76), Expect = 0.036
Identities = 22/69 (31%), Positives = 31/69 (44%), Gaps = 4/69 (5%)
Frame = +2
Query: 137 STTRPATEFTPRLKVPSRTSTQNTPPS----KLRVPTSTLPLTDNPSTSPTSLTRTVTNP 304
S P+ +P + VPS ST +P S P+S +P PST PT ++ +P
Sbjct: 519 SPPSPSISPSPPITVPSPPSTPTSPGSPPSPSSPTPSSPIPSPPTPSTPPTPISPGQNSP 578
Query: 305 REAICPPLT 331
PP T
Sbjct: 579 PIIPSPPFT 587
>At2g18470.1 68415.m02151 protein kinase family protein contains
Pfam PF00069: Protein kinase domain
Length = 633
Score = 33.9 bits (74), Expect = 0.063
Identities = 16/59 (27%), Positives = 28/59 (47%)
Frame = +2
Query: 164 TPRLKVPSRTSTQNTPPSKLRVPTSTLPLTDNPSTSPTSLTRTVTNPREAICPPLTQFP 340
+P P+ +++ +PPS TS+ P PS +P + + P ++ PP Q P
Sbjct: 4 SPESAPPTNSTSSPSPPSNTNSTTSSPPAPSPPSPTPPQGDSSSSPPPDSTSPPAPQAP 62
>At1g31870.1 68414.m03917 expressed protein
Length = 561
Score = 33.5 bits (73), Expect = 0.083
Identities = 18/65 (27%), Positives = 27/65 (41%)
Frame = +2
Query: 116 PXKATSNSTTRPATEFTPRLKVPSRTSTQNTPPSKLRVPTSTLPLTDNPSTSPTSLTRTV 295
P + P+ E PR V R T +PP + + S P + T P SL +
Sbjct: 118 PPRRQRTRNDSPSPEPGPRRSVADRVDTDMSPPRRRKRHNSPSPEPNRKHTKPVSLDSDM 177
Query: 296 TNPRE 310
+ PR+
Sbjct: 178 SPPRK 182
>At1g55610.1 68414.m06365 protein kinase family protein contains
Prosite:PS00107: Protein kinases ATP-binding region
signature
Length = 1166
Score = 33.1 bits (72), Expect = 0.11
Identities = 21/67 (31%), Positives = 26/67 (38%)
Frame = -2
Query: 420 VGDDFSFHXXXXXXXXXXXGKSAGDRLGNWVRGGQMASLGLVTVLVSDVGEVDGLSVRGS 241
+ DDF+ + LGNW S V SD G + GL +R S
Sbjct: 28 INDDFNETALLLAFKQNSVKSDPNNVLGNWKYESGRGSCSWRGVSCSDDGRIVGLDLRNS 87
Query: 240 VLVGTLN 220
L GTLN
Sbjct: 88 GLTGTLN 94
>At5g14920.1 68418.m01750 gibberellin-regulated family protein
similar to SP|P46689 Gibberellin-regulated protein 1
precursor {Arabidopsis thaliana}; contains Pfam profile
PF02704: Gibberellin regulated protein
Length = 275
Score = 32.7 bits (71), Expect = 0.14
Identities = 25/85 (29%), Positives = 34/85 (40%), Gaps = 2/85 (2%)
Frame = +2
Query: 77 VRRPSGQIQLRHHPXKATSNSTTRPATEFT--PRLKVPSRTSTQNTPPSKLRVPTSTLPL 250
V+ PS Q P TT P T P P + T P S ++ PT+T P+
Sbjct: 114 VKPPSVQPPTYKPPTPTVKPPTTSPVKPPTTPPVQSPPVQPPTYKPPTSPVKPPTTTPPV 173
Query: 251 TDNPSTSPTSLTRTVTNPREAICPP 325
P+T+P T P + PP
Sbjct: 174 KP-PTTTPPVQPPTYNPPTTPVKPP 197
Score = 27.5 bits (58), Expect = 5.4
Identities = 18/59 (30%), Positives = 24/59 (40%)
Frame = +2
Query: 164 TPRLKVPSRTSTQNTPPSKLRVPTSTLPLTDNPSTSPTSLTRTVTNPREAICPPLTQFP 340
TP +K+P PP+ P S P T P T PT T + + PP+ P
Sbjct: 94 TPPIKLPPVQPPTYKPPTPTVKPPSVQPPTYKPPT-PTVKPPTTSPVKPPTTPPVQSPP 151
>At2g40180.1 68415.m04941 protein phosphatase 2C, putative / PP2C,
putative contains PF00481: Protein phosphatase 2C
domain; identical to protein phosphatase 2C (GI:4587992)
[Arabidopsis thaliana]
Length = 390
Score = 32.7 bits (71), Expect = 0.14
Identities = 22/72 (30%), Positives = 31/72 (43%), Gaps = 1/72 (1%)
Frame = +2
Query: 98 IQLRHHPXKATSNSTTRPATEFT-PRLKVPSRTSTQNTPPSKLRVPTSTLPLTDNPSTSP 274
+QL +P K T N +FT R + + S PP + PTS +P +SP
Sbjct: 1 MQLSKNPIKQTRNREKNYTDDFTMKRSVIMAPESPVFFPPPLVFSPTSVKTPLSSPRSSP 60
Query: 275 TSLTRTVTNPRE 310
LT PR+
Sbjct: 61 PKLTMVACPPRK 72
>At1g62760.1 68414.m07083 invertase/pectin methylesterase inhibitor
family protein low similarity to extensin [Volvox
carteri] GI:21992
Length = 312
Score = 32.7 bits (71), Expect = 0.14
Identities = 22/74 (29%), Positives = 37/74 (50%)
Frame = +2
Query: 128 TSNSTTRPATEFTPRLKVPSRTSTQNTPPSKLRVPTSTLPLTDNPSTSPTSLTRTVTNPR 307
TS+S+ P++ P +S + PPS L P+S PL+ +PS+ P ++P
Sbjct: 22 TSSSSLSPSSSSPSLSPSPPSSSPSSAPPSSLS-PSSPPPLSLSPSSPPP--PPPSSSPL 78
Query: 308 EAICPPLTQFPRRS 349
++ P L+ P S
Sbjct: 79 SSLSPSLSPSPPSS 92
Score = 28.7 bits (61), Expect = 2.4
Identities = 16/46 (34%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
Frame = +2
Query: 140 TTRPATEFTPRLKV-PSRTSTQNTPPSKLRVPTSTLPLTDNPSTSP 274
++ P + +P L P +S + PPS L P+S PL+ +PS+ P
Sbjct: 74 SSSPLSSLSPSLSPSPPSSSPSSAPPSSLS-PSSPPPLSLSPSSPP 118
>At1g05800.1 68414.m00606 lipase class 3 family protein similar to
DEFECTIVE IN ANTHER DEHISCENCE1 [Arabidopsis thaliana]
GI:16215706; contains Pfam profile PF01764: Lipase
Length = 471
Score = 32.7 bits (71), Expect = 0.14
Identities = 19/41 (46%), Positives = 25/41 (60%)
Frame = +2
Query: 131 SNSTTRPATEFTPRLKVPSRTSTQNTPPSKLRVPTSTLPLT 253
S+ST P +P L +PS +S+Q PPS R P TLPL+
Sbjct: 44 SSSTMSPPISSSP-LSLPSSSSSQAIPPS--RAPAVTLPLS 81
>At5g10430.1 68418.m01209 arabinogalactan-protein (AGP4) identical
to gi_3883126_gb_AAC77826
Length = 135
Score = 32.3 bits (70), Expect = 0.19
Identities = 18/56 (32%), Positives = 26/56 (46%), Gaps = 1/56 (1%)
Frame = +2
Query: 116 PXKATSNSTTRPATEFTPRLKVPSRTSTQ-NTPPSKLRVPTSTLPLTDNPSTSPTS 280
P AT PA P P+ +T + PS VPT++ P + P+ SP+S
Sbjct: 44 PPVATPPPAATPAPATPPPAATPAPATTPPSVAPSPADVPTASPPAPEGPTVSPSS 99
>At3g22120.1 68416.m02792 protease inhibitor/seed storage/lipid
transfer protein (LTP) family protein similar to
SP|Q00451|PRF1_LYCES 36.4 kDa proline-rich protein
Lycopersicon esculentum, proline-rich cell wall protein
[Medicago sativa] GI:3818416; contains Pfam profile
PF00234 Protease inhibitor/seed storage/LTP family
Length = 334
Score = 32.3 bits (70), Expect = 0.19
Identities = 27/99 (27%), Positives = 37/99 (37%), Gaps = 4/99 (4%)
Frame = +2
Query: 56 PHRQV*RVRRPSGQIQLRHHPXKATSNST-TRPATEFTPRLKVPSRTSTQNTPPSKLRVP 232
PH + V+ ++ HP T +P T+ P K P PPS + P
Sbjct: 72 PHPKPPTVKPHPKPPTVKPHPKPPTVKPPHPKPPTKPHPHPKPPIVKPPTKPPPSTPKPP 131
Query: 233 TSTLPLTDNPSTS---PTSLTRTVTNPREAICPPLTQFP 340
T P T P T+ P++ P CPP T P
Sbjct: 132 TKPPPSTPKPPTTKPPPSTPKPPHHKPPPTPCPPPTPTP 170
Score = 28.3 bits (60), Expect = 3.1
Identities = 22/68 (32%), Positives = 27/68 (39%)
Frame = +2
Query: 137 STTRPATEFTPRLKVPSRTSTQNTPPSKLRVPTSTLPLTDNPSTSPTSLTRTVTNPREAI 316
ST +P T+ P P T PPS + P P T P +PT VT P
Sbjct: 126 STPKPPTKPPPSTPKPPTTKP---PPSTPKPPHHKPPPTPCPPPTPTPTPPVVTPPTPT- 181
Query: 317 CPPLTQFP 340
PP+ P
Sbjct: 182 -PPVITPP 188
>At4g12500.1 68417.m01975 protease inhibitor/seed storage/lipid
transfer protein (LTP) family protein similar to pEARLI
1 (Accession No. L43080): an Arabidopsis member of a
conserved gene family (PGF95-099), Plant Physiol. 109
(4), 1497 (1995); contains Pfam protease inhibitor/seed
storage/LTP family domain PF00234
Length = 177
Score = 31.5 bits (68), Expect = 0.33
Identities = 20/65 (30%), Positives = 29/65 (44%), Gaps = 2/65 (3%)
Frame = +2
Query: 134 NSTTRPATEFTPRLKVPSRTSTQNTPPS--KLRVPTSTLPLTDNPSTSPTSLTRTVTNPR 307
N + +P T +P++ P S PS VPT ++P PS +PT +T T
Sbjct: 31 NLSPKPRTVPSPKVPSPKYPSPSIPSPSVPTPSVPTPSVPTPSVPSPNPTPVTPPRTPGS 90
Query: 308 EAICP 322
CP
Sbjct: 91 SGNCP 95
>At1g35230.1 68414.m04369 arabinogalactan-protein (AGP5) identical
to gi_3883128_gb_AAC77827
Length = 133
Score = 31.5 bits (68), Expect = 0.33
Identities = 20/66 (30%), Positives = 30/66 (45%)
Frame = +2
Query: 116 PXKATSNSTTRPATEFTPRLKVPSRTSTQNTPPSKLRVPTSTLPLTDNPSTSPTSLTRTV 295
P S P +PR P+ + + N PPS PT+ P++ P+ SP + T
Sbjct: 26 PAPTISPLPATPTPSQSPRATAPAPSPSANPPPS---APTTAPPVSQPPTESPPA-PPTS 81
Query: 296 TNPREA 313
T+P A
Sbjct: 82 TSPSGA 87
>At4g35800.1 68417.m05087 DNA-directed RNA polymerase II largest
subunit (RPB205) (RPII) (RPB1) nearly identical to
P|P18616 DNA-directed RNA polymerase II largest subunit
(EC 2.7.7.6) {Arabidopsis thaliana}
Length = 1840
Score = 31.1 bits (67), Expect = 0.44
Identities = 20/59 (33%), Positives = 29/59 (49%)
Frame = +2
Query: 128 TSNSTTRPATEFTPRLKVPSRTSTQNTPPSKLRVPTSTLPLTDNPSTSPTSLTRTVTNP 304
TS S + + ++P S TS +P S PTS +PS SPTS + + T+P
Sbjct: 1625 TSPSYSPTSPSYSPTSPAYSPTSPAYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSP 1683
Score = 30.7 bits (66), Expect = 0.58
Identities = 20/59 (33%), Positives = 29/59 (49%)
Frame = +2
Query: 128 TSNSTTRPATEFTPRLKVPSRTSTQNTPPSKLRVPTSTLPLTDNPSTSPTSLTRTVTNP 304
TS S + + ++P S TS +P S PTS +PS SPTS + + T+P
Sbjct: 1618 TSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPAYSPTSPAYSPTSPSYSPTSPSYSPTSP 1676
Score = 30.7 bits (66), Expect = 0.58
Identities = 22/58 (37%), Positives = 29/58 (50%)
Frame = +2
Query: 131 SNSTTRPATEFTPRLKVPSRTSTQNTPPSKLRVPTSTLPLTDNPSTSPTSLTRTVTNP 304
S S T PA ++P S TS +P S PTS +PS SPTS + + T+P
Sbjct: 1635 SYSPTSPA--YSPTSPAYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1690
Score = 30.3 bits (65), Expect = 0.77
Identities = 21/56 (37%), Positives = 28/56 (50%)
Frame = +2
Query: 137 STTRPATEFTPRLKVPSRTSTQNTPPSKLRVPTSTLPLTDNPSTSPTSLTRTVTNP 304
S T PA ++P S TS +P S PTS +PS SPTS + + T+P
Sbjct: 1644 SPTSPA--YSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1697
Score = 29.9 bits (64), Expect = 1.0
Identities = 20/64 (31%), Positives = 32/64 (50%), Gaps = 1/64 (1%)
Frame = +2
Query: 116 PXKATSNSTTRPATE-FTPRLKVPSRTSTQNTPPSKLRVPTSTLPLTDNPSTSPTSLTRT 292
P + ++ T P++ ++P S TS +P S PTS +PS SPTS + +
Sbjct: 1571 PGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYS 1630
Query: 293 VTNP 304
T+P
Sbjct: 1631 PTSP 1634
Score = 29.9 bits (64), Expect = 1.0
Identities = 19/59 (32%), Positives = 29/59 (49%)
Frame = +2
Query: 128 TSNSTTRPATEFTPRLKVPSRTSTQNTPPSKLRVPTSTLPLTDNPSTSPTSLTRTVTNP 304
TS S + + ++P S TS +P S PTS +P+ SPTS + + T+P
Sbjct: 1611 TSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPAYSPTSPAYSPTSPSYSPTSP 1669
Score = 29.1 bits (62), Expect = 1.8
Identities = 19/59 (32%), Positives = 28/59 (47%)
Frame = +2
Query: 128 TSNSTTRPATEFTPRLKVPSRTSTQNTPPSKLRVPTSTLPLTDNPSTSPTSLTRTVTNP 304
TS S + + ++P S TS +P S PTS +P+ SPTS + T+P
Sbjct: 1604 TSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPAYSPTSPAYSPTSP 1662
Score = 29.1 bits (62), Expect = 1.8
Identities = 21/56 (37%), Positives = 27/56 (48%)
Frame = +2
Query: 137 STTRPATEFTPRLKVPSRTSTQNTPPSKLRVPTSTLPLTDNPSTSPTSLTRTVTNP 304
S T PA ++P S TS +P S PTS +PS SPTS + T+P
Sbjct: 1651 SPTSPA--YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSP 1704
Score = 29.1 bits (62), Expect = 1.8
Identities = 19/59 (32%), Positives = 28/59 (47%)
Frame = +2
Query: 128 TSNSTTRPATEFTPRLKVPSRTSTQNTPPSKLRVPTSTLPLTDNPSTSPTSLTRTVTNP 304
TS S + + ++P S TS +P S PTS +P SPTS + + T+P
Sbjct: 1660 TSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPGYSPTSPSYSPTSP 1718
Score = 28.7 bits (61), Expect = 2.4
Identities = 19/59 (32%), Positives = 28/59 (47%)
Frame = +2
Query: 128 TSNSTTRPATEFTPRLKVPSRTSTQNTPPSKLRVPTSTLPLTDNPSTSPTSLTRTVTNP 304
TS + + + ++P S TS +P S PTS +PS SPTS + T+P
Sbjct: 1590 TSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSP 1648
Score = 28.7 bits (61), Expect = 2.4
Identities = 19/59 (32%), Positives = 28/59 (47%)
Frame = +2
Query: 128 TSNSTTRPATEFTPRLKVPSRTSTQNTPPSKLRVPTSTLPLTDNPSTSPTSLTRTVTNP 304
TS S + + ++P S TS +P S PTS +P+ SPTS + T+P
Sbjct: 1597 TSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPAYSPTSP 1655
Score = 28.7 bits (61), Expect = 2.4
Identities = 20/59 (33%), Positives = 28/59 (47%)
Frame = +2
Query: 128 TSNSTTRPATEFTPRLKVPSRTSTQNTPPSKLRVPTSTLPLTDNPSTSPTSLTRTVTNP 304
TS S + + ++P S TS +P S PTS +PS SPTS + T+P
Sbjct: 1667 TSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPGYSPTSPSYSPTSPSYGPTSP 1725
Score = 27.5 bits (58), Expect = 5.4
Identities = 19/59 (32%), Positives = 28/59 (47%)
Frame = +2
Query: 128 TSNSTTRPATEFTPRLKVPSRTSTQNTPPSKLRVPTSTLPLTDNPSTSPTSLTRTVTNP 304
TS + + ++P S TS +P S PTS +PS SPTS + + T+P
Sbjct: 1569 TSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1627
Score = 26.6 bits (56), Expect = 9.5
Identities = 20/56 (35%), Positives = 27/56 (48%)
Frame = +2
Query: 137 STTRPATEFTPRLKVPSRTSTQNTPPSKLRVPTSTLPLTDNPSTSPTSLTRTVTNP 304
S T P ++P S TS +P S PTS +PS SPTS + + T+P
Sbjct: 1560 SPTSPG--YSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSPSYSPTSP 1613
Score = 26.6 bits (56), Expect = 9.5
Identities = 19/56 (33%), Positives = 27/56 (48%)
Frame = +2
Query: 137 STTRPATEFTPRLKVPSRTSTQNTPPSKLRVPTSTLPLTDNPSTSPTSLTRTVTNP 304
S T P ++P S +S +P S PTS +PS SPTS + + T+P
Sbjct: 1567 SPTSPG--YSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSP 1620
Score = 26.6 bits (56), Expect = 9.5
Identities = 18/59 (30%), Positives = 28/59 (47%)
Frame = +2
Query: 128 TSNSTTRPATEFTPRLKVPSRTSTQNTPPSKLRVPTSTLPLTDNPSTSPTSLTRTVTNP 304
TS + + + ++P S TS +P S PTS +P+ SPTS + T+P
Sbjct: 1653 TSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPGYSPTSP 1711
>At4g26910.3 68417.m03871 2-oxoacid dehydrogenase family protein
similar to SP|P36957 Dihydrolipoamide
succinyltransferase component of 2-oxoglutarate
dehydrogenase complex, mitochondrial precursor (EC
2.3.1.61) {Homo sapiens}; contains Pfam profiles
PF00198: 2-oxo acid dehydrogenases acyltransferase
(catalytic domain), PF00364: Biotin-requiring enzyme
Length = 365
Score = 31.1 bits (67), Expect = 0.44
Identities = 17/60 (28%), Positives = 31/60 (51%), Gaps = 2/60 (3%)
Frame = +2
Query: 152 ATEFTPRLKVPSRTSTQNTPPS--KLRVPTSTLPLTDNPSTSPTSLTRTVTNPREAICPP 325
A++ TP K+P T T+ +PP+ K + + P+ + P +P+S + +E PP
Sbjct: 74 ASQVTPSQKIPETTDTKPSPPAEDKQKPRVESAPVAEKPK-APSSPPPPKQSAKEPQLPP 132
>At4g26910.2 68417.m03873 2-oxoacid dehydrogenase family protein
similar to SP|P36957 Dihydrolipoamide
succinyltransferase component of 2-oxoglutarate
dehydrogenase complex, mitochondrial precursor (EC
2.3.1.61) {Homo sapiens}; contains Pfam profiles
PF00198: 2-oxo acid dehydrogenases acyltransferase
(catalytic domain), PF00364: Biotin-requiring enzyme
Length = 463
Score = 31.1 bits (67), Expect = 0.44
Identities = 17/60 (28%), Positives = 31/60 (51%), Gaps = 2/60 (3%)
Frame = +2
Query: 152 ATEFTPRLKVPSRTSTQNTPPS--KLRVPTSTLPLTDNPSTSPTSLTRTVTNPREAICPP 325
A++ TP K+P T T+ +PP+ K + + P+ + P +P+S + +E PP
Sbjct: 172 ASQVTPSQKIPETTDTKPSPPAEDKQKPRVESAPVAEKPK-APSSPPPPKQSAKEPQLPP 230
>At4g26910.1 68417.m03872 2-oxoacid dehydrogenase family protein
similar to SP|P36957 Dihydrolipoamide
succinyltransferase component of 2-oxoglutarate
dehydrogenase complex, mitochondrial precursor (EC
2.3.1.61) {Homo sapiens}; contains Pfam profiles
PF00198: 2-oxo acid dehydrogenases acyltransferase
(catalytic domain), PF00364: Biotin-requiring enzyme
Length = 464
Score = 31.1 bits (67), Expect = 0.44
Identities = 17/60 (28%), Positives = 31/60 (51%), Gaps = 2/60 (3%)
Frame = +2
Query: 152 ATEFTPRLKVPSRTSTQNTPPS--KLRVPTSTLPLTDNPSTSPTSLTRTVTNPREAICPP 325
A++ TP K+P T T+ +PP+ K + + P+ + P +P+S + +E PP
Sbjct: 173 ASQVTPSQKIPETTDTKPSPPAEDKQKPRVESAPVAEKPK-APSSPPPPKQSAKEPQLPP 231
>At2g18490.1 68415.m02155 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 251
Score = 31.1 bits (67), Expect = 0.44
Identities = 13/30 (43%), Positives = 18/30 (60%)
Frame = +2
Query: 233 TSTLPLTDNPSTSPTSLTRTVTNPREAICP 322
T LP+ DNP + S T+T+TN +I P
Sbjct: 11 TDYLPIKDNPHLTRVSFTQTITNRYSSIVP 40
>At2g16630.1 68415.m01909 proline-rich family protein contains
proline-rich extensin domains, INTERPRO:IPR002965
Length = 359
Score = 31.1 bits (67), Expect = 0.44
Identities = 19/58 (32%), Positives = 25/58 (43%)
Frame = +2
Query: 167 PRLKVPSRTSTQNTPPSKLRVPTSTLPLTDNPSTSPTSLTRTVTNPREAICPPLTQFP 340
P++ V S PP K+ V + P T P P VT+P + PPL Q P
Sbjct: 176 PKVPVISPDPPATLPPPKVPVISPDPPTTLPPPLVPVINLPPVTSPPQFKLPPLPQIP 233
>At3g24550.1 68416.m03083 protein kinase family protein contains
Pfam domain PF00069: Protein kinase domain
Length = 652
Score = 30.7 bits (66), Expect = 0.58
Identities = 19/65 (29%), Positives = 29/65 (44%), Gaps = 3/65 (4%)
Frame = +2
Query: 140 TTRPATEFTPRLKVPS---RTSTQNTPPSKLRVPTSTLPLTDNPSTSPTSLTRTVTNPRE 310
+T P+ TP PS ++T PP+ P +T P + PS S S + ++P
Sbjct: 2 STAPSPGTTPSPSPPSPPTNSTTTTPPPAASSPPPTTTPSSPPPSPSTNSTSPPPSSPLP 61
Query: 311 AICPP 325
PP
Sbjct: 62 PSLPP 66
Score = 30.7 bits (66), Expect = 0.58
Identities = 21/73 (28%), Positives = 34/73 (46%)
Frame = +2
Query: 116 PXKATSNSTTRPATEFTPRLKVPSRTSTQNTPPSKLRVPTSTLPLTDNPSTSPTSLTRTV 295
P T+++TT P P P T+T ++PP P+ + T P +SP +
Sbjct: 16 PSPPTNSTTTTPP----PAASSPPPTTTPSSPP-----PSPSTNSTSPPPSSPLPPSLPP 66
Query: 296 TNPREAICPPLTQ 334
+P ++ PPL Q
Sbjct: 67 PSPPGSLTPPLPQ 79
Score = 30.3 bits (65), Expect = 0.77
Identities = 24/78 (30%), Positives = 32/78 (41%), Gaps = 3/78 (3%)
Frame = +2
Query: 116 PXKATSNSTTR---PATEFTPRLKVPSRTSTQNTPPSKLRVPTSTLPLTDNPSTSPTSLT 286
P +NSTT PA P PS + S P+S LP + P + P SLT
Sbjct: 15 PPSPPTNSTTTTPPPAASSPPPTTTPSSPPPSPSTNSTSPPPSSPLPPSLPPPSPPGSLT 74
Query: 287 RTVTNPREAICPPLTQFP 340
+ P + P+T P
Sbjct: 75 PPLPQPSPS--APITPSP 90
Score = 30.3 bits (65), Expect = 0.77
Identities = 23/69 (33%), Positives = 32/69 (46%)
Frame = +2
Query: 116 PXKATSNSTTRPATEFTPRLKVPSRTSTQNTPPSKLRVPTSTLPLTDNPSTSPTSLTRTV 295
P ++NST+ P + P P TPP L P+ + P+T +P SPT T
Sbjct: 44 PPSPSTNSTSPPPSSPLPPSLPPPSPPGSLTPP--LPQPSPSAPITPSP-PSPT----TP 96
Query: 296 TNPREAICP 322
+NPR P
Sbjct: 97 SNPRSPPSP 105
>At2g42840.2 68415.m05305 protodermal factor 1 (PDF1) identical to
protodermal factor 1 [Arabidopsis thaliana]
gi|4929130|gb|AAD33869
Length = 306
Score = 30.7 bits (66), Expect = 0.58
Identities = 18/52 (34%), Positives = 22/52 (42%)
Frame = +2
Query: 113 HPXKATSNSTTRPATEFTPRLKVPSRTSTQNTPPSKLRVPTSTLPLTDNPST 268
HP S++ T TP PS T T +TPP P S +PST
Sbjct: 72 HP-SPPSHTPTPSTPSHTPTPHTPSHTPTPHTPPCNCGSPPSHPSTPSHPST 122
>At2g42840.1 68415.m05304 protodermal factor 1 (PDF1) identical to
protodermal factor 1 [Arabidopsis thaliana]
gi|4929130|gb|AAD33869
Length = 306
Score = 30.7 bits (66), Expect = 0.58
Identities = 18/52 (34%), Positives = 22/52 (42%)
Frame = +2
Query: 113 HPXKATSNSTTRPATEFTPRLKVPSRTSTQNTPPSKLRVPTSTLPLTDNPST 268
HP S++ T TP PS T T +TPP P S +PST
Sbjct: 72 HP-SPPSHTPTPSTPSHTPTPHTPSHTPTPHTPPCNCGSPPSHPSTPSHPST 122
>At5g20750.1 68418.m02466 Ulp1 protease family protein contains Pfam
profile PF02902: Ulp1 protease family, C-terminal
catalytic domain
Length = 944
Score = 30.3 bits (65), Expect = 0.77
Identities = 21/57 (36%), Positives = 25/57 (43%), Gaps = 9/57 (15%)
Frame = +1
Query: 247 PDGQPIDLAYVADENGYQ-PQGSHLPTP--------HPIPEAIARALAYIEAHPPSP 390
P+ PID V N Q P G+ P+P HPIPE A+ PPSP
Sbjct: 368 PNQWPIDATTVQPTNDEQHPSGNRRPSPGLAETSQAHPIPEMSAKEPKQSSFPPPSP 424
>At4g39140.4 68417.m05544 expressed protein
Length = 429
Score = 30.3 bits (65), Expect = 0.77
Identities = 19/54 (35%), Positives = 28/54 (51%), Gaps = 2/54 (3%)
Frame = +2
Query: 194 STQNTPPSKLRVPTSTLPLTDNPSTSPTS--LTRTVTNPREAICPPLTQFPRRS 349
ST++ PS L +L L PS+ PTS +++ +P + LTQ PR S
Sbjct: 116 STESAAPSYLSPAQLSLSLASQPSSFPTSPLSSQSYLHPASSSTLKLTQHPRLS 169
>At4g39140.3 68417.m05543 expressed protein
Length = 429
Score = 30.3 bits (65), Expect = 0.77
Identities = 19/54 (35%), Positives = 28/54 (51%), Gaps = 2/54 (3%)
Frame = +2
Query: 194 STQNTPPSKLRVPTSTLPLTDNPSTSPTS--LTRTVTNPREAICPPLTQFPRRS 349
ST++ PS L +L L PS+ PTS +++ +P + LTQ PR S
Sbjct: 116 STESAAPSYLSPAQLSLSLASQPSSFPTSPLSSQSYLHPASSSTLKLTQHPRLS 169
>At4g39140.2 68417.m05542 expressed protein
Length = 429
Score = 30.3 bits (65), Expect = 0.77
Identities = 19/54 (35%), Positives = 28/54 (51%), Gaps = 2/54 (3%)
Frame = +2
Query: 194 STQNTPPSKLRVPTSTLPLTDNPSTSPTS--LTRTVTNPREAICPPLTQFPRRS 349
ST++ PS L +L L PS+ PTS +++ +P + LTQ PR S
Sbjct: 116 STESAAPSYLSPAQLSLSLASQPSSFPTSPLSSQSYLHPASSSTLKLTQHPRLS 169
>At4g39140.1 68417.m05541 expressed protein
Length = 429
Score = 30.3 bits (65), Expect = 0.77
Identities = 19/54 (35%), Positives = 28/54 (51%), Gaps = 2/54 (3%)
Frame = +2
Query: 194 STQNTPPSKLRVPTSTLPLTDNPSTSPTS--LTRTVTNPREAICPPLTQFPRRS 349
ST++ PS L +L L PS+ PTS +++ +P + LTQ PR S
Sbjct: 116 STESAAPSYLSPAQLSLSLASQPSSFPTSPLSSQSYLHPASSSTLKLTQHPRLS 169
>At4g37450.1 68417.m05301 arabinogalactan-protein (AGP18) identical
to gi_11935088_gb_AAG41964
Length = 209
Score = 30.3 bits (65), Expect = 0.77
Identities = 19/71 (26%), Positives = 31/71 (43%)
Frame = +2
Query: 116 PXKATSNSTTRPATEFTPRLKVPSRTSTQNTPPSKLRVPTSTLPLTDNPSTSPTSLTRTV 295
P + + S T P+ T K P+ TS T P+K +++ P+ S +P S +
Sbjct: 24 PISSPTKSPTTPSAPTTSPTKSPAVTSP-TTAPAKTPTASASSPVESPKSPAPVSESSPP 82
Query: 296 TNPREAICPPL 328
P PP+
Sbjct: 83 PTPVPESSPPV 93
>At4g32020.1 68417.m04558 expressed protein NuLL
Length = 181
Score = 30.3 bits (65), Expect = 0.77
Identities = 17/47 (36%), Positives = 22/47 (46%)
Frame = +2
Query: 209 PPSKLRVPTSTLPLTDNPSTSPTSLTRTVTNPREAICPPLTQFPRRS 349
P L+ P S + NPS P +TV+N R PP +Q R S
Sbjct: 8 PQDCLKDPFSHMKQHRNPSACPNRQKKTVSNNRTRRSPPRSQSSRSS 54
>At1g69295.1 68414.m07947 beta-1,3-glucanase-related low similarity
to elicitor inducible beta-1,3-glucanase NtEIG-E76
[Nicotiana tabacum] GI:11071974
Length = 222
Score = 30.3 bits (65), Expect = 0.77
Identities = 23/61 (37%), Positives = 29/61 (47%), Gaps = 1/61 (1%)
Frame = +2
Query: 125 ATSNSTTRPATEFTPRLKVPSRTSTQNTPPSKLRVPTSTLPLTDNPST-SPTSLTRTVTN 301
A S STT P+T + L S + T T PTS P T P+T +PT+ T T
Sbjct: 88 AASPSTTPPSTA-SNCLTGSSSSGTPTTGTPTTGTPTSGTPTTGTPTTGTPTTGTPTSGT 146
Query: 302 P 304
P
Sbjct: 147 P 147
>At5g14540.1 68418.m01704 proline-rich family protein contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 547
Score = 29.9 bits (64), Expect = 1.0
Identities = 16/53 (30%), Positives = 26/53 (49%)
Frame = +2
Query: 176 KVPSRTSTQNTPPSKLRVPTSTLPLTDNPSTSPTSLTRTVTNPREAICPPLTQ 334
KV + T +T P ++LP + +P SLT+ P++ I PP +Q
Sbjct: 221 KVNQQPETHSTHVEPTAQPPASLPQPPASAAAPPSLTQQGLPPQQFIQPPASQ 273
>At1g56210.1 68414.m06460 copper chaperone (CCH)-related low
similarity to copper homeostasis factor
[GI:3168840][PMID:9701579] and farnesylated proteins
ATFP3 [GI:4097547] and GMFP7 [Glycine max][GI:4097573];
contains PF00403 Heavy-metal-associated domain
Length = 364
Score = 29.9 bits (64), Expect = 1.0
Identities = 24/76 (31%), Positives = 30/76 (39%)
Frame = +1
Query: 106 TTSPLXGHFQFNYETGNGIYAQAEGAVKNVNSEYPAIEVKGAYKYTSPDGQPIDLAYVAD 285
TT+ H + Y G YA + N P + V A YT P P AY+
Sbjct: 276 TTNNPPRHDLYPYPA-QGYYAPQVMYGVSYNVAQPPVSVDAASYYTPPP--PYSYAYM-- 330
Query: 286 ENGYQPQGSHLPTPHP 333
NGYQP + P P
Sbjct: 331 HNGYQPSDQNPCQPRP 346
>At5g52890.1 68418.m06564 AT hook motif-containing protein contains
Pfam profile PF02178: AT hook motif
Length = 357
Score = 29.5 bits (63), Expect = 1.3
Identities = 21/82 (25%), Positives = 40/82 (48%), Gaps = 1/82 (1%)
Frame = +1
Query: 160 IYAQAEGAVKNVNSEYPAIEVKGAYKYTSPDG-QPIDLAYVADENGYQPQGSHLPTPHPI 336
+YA+ + + + + P E K A T G +P A +AD+N + LP HP+
Sbjct: 103 MYARNDIPIPSSYQQTPLQEKKNAGNQTDDIGSEPQTDALIADKNQSATCTTSLPDDHPM 162
Query: 337 PEAIARALAYIEAHPPSPSVVE 402
+A ++A E + P ++++
Sbjct: 163 RDAGVGSVAMGERNDPIDTLMK 184
>At5g19920.1 68418.m02370 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
related to TipD protein (SP:O15736, PIR:T08602)
[Dictyostelium discoideum]; related to WD-repeat protein
RBAP1 (GI:9716495) [Zea mays]
Length = 656
Score = 29.5 bits (63), Expect = 1.3
Identities = 25/74 (33%), Positives = 34/74 (45%), Gaps = 1/74 (1%)
Frame = +2
Query: 125 ATSNSTTRPATEFTPRLKVPSRTSTQNTPPSKLRVPTSTLPLTDNPSTSPTSL-TRTVTN 301
A NST + +E LK+PS PPS R ++T+ N +T + TR
Sbjct: 117 ANENSTPQSPSEMES-LKLPSII----LPPSFKRRASATVRAEVNETTQAQPMATRDYNI 171
Query: 302 PREAICPPLTQFPR 343
PRE C P + PR
Sbjct: 172 PREDTCGPEAKRPR 185
>At5g38560.1 68418.m04662 protein kinase family protein contains
protein kinase domain, Pfam:PF00069
Length = 681
Score = 29.1 bits (62), Expect = 1.8
Identities = 18/56 (32%), Positives = 23/56 (41%), Gaps = 2/56 (3%)
Frame = +2
Query: 164 TPRLKVPSRTSTQNTPPSKLRVPTSTLPLTDNP--STSPTSLTRTVTNPREAICPP 325
TP P+ T + PP P+ P T NP SP+ T + P E PP
Sbjct: 101 TPATTPPAPPQTVSPPPPPDASPSPPAPTTTNPPPKPSPSPPGETPSPPGETPSPP 156
Score = 29.1 bits (62), Expect = 1.8
Identities = 25/84 (29%), Positives = 32/84 (38%), Gaps = 9/84 (10%)
Frame = +2
Query: 116 PXKATSNSTTRPATEFTPRLKVPSRTSTQNTPPSKLRVPTSTLPLTDNP--STSP----- 274
P S S P T P PS +PP + P P T P +TSP
Sbjct: 117 PPPDASPSPPAPTTTNPPPKPSPSPPGETPSPPGETPSPPKPSPSTPTPTTTTSPPPPPA 176
Query: 275 TSLTRTVTNPRE--AICPPLTQFP 340
TS + +NP + + PP T P
Sbjct: 177 TSASPPSSNPTDPSTLAPPPTPLP 200
Score = 28.3 bits (60), Expect = 3.1
Identities = 17/63 (26%), Positives = 26/63 (41%), Gaps = 2/63 (3%)
Frame = +2
Query: 143 TRPATEFTPRLKVPSRTSTQNTPPSKLRVPTSTLPLTDNPSTSPTSLTRTVTNPREAIC- 319
T+P T P P + Q+ PP P + + PS+SP +T+P +
Sbjct: 27 TQPTTPSAPPPVTPPPSPPQSPPPVVSSSPPPPVVSSPPPSSSPPPSPPVITSPPPTVAS 86
Query: 320 -PP 325
PP
Sbjct: 87 SPP 89
>At2g39720.1 68415.m04874 zinc finger (C3HC4-type RING finger)
family protein contains Pfam domain, PF00097: Zinc
finger, C3HC4 type (RING finger)
Length = 401
Score = 29.1 bits (62), Expect = 1.8
Identities = 18/51 (35%), Positives = 24/51 (47%)
Frame = +2
Query: 149 PATEFTPRLKVPSRTSTQNTPPSKLRVPTSTLPLTDNPSTSPTSLTRTVTN 301
P+ FT R+ T+ PPS S DN S +PT +TRT +N
Sbjct: 42 PSDSFTTTTTTQHRSPTRFPPPSSSSSTPSASMHADN-SPTPTIVTRTRSN 91
>At4g14150.1 68417.m02183 phragmoplast-associated kinesin-related
protein (PAKRP1)
Length = 1292
Score = 28.7 bits (61), Expect = 2.4
Identities = 14/55 (25%), Positives = 25/55 (45%)
Frame = +2
Query: 182 PSRTSTQNTPPSKLRVPTSTLPLTDNPSTSPTSLTRTVTNPREAICPPLTQFPRR 346
P+ + +++ PP KLR P D +++P + + NP PP R+
Sbjct: 22 PNPSISKSKPPRKLRSAKENAPPLDRNTSTPDHRSMRMKNPLPPRPPPSNPLKRK 76
>At4g03090.1 68417.m00417 expressed protein
Length = 877
Score = 28.7 bits (61), Expect = 2.4
Identities = 21/74 (28%), Positives = 32/74 (43%), Gaps = 1/74 (1%)
Frame = +2
Query: 98 IQLRHHPXK-ATSNSTTRPATEFTPRLKVPSRTSTQNTPPSKLRVPTSTLPLTDNPSTSP 274
I+L + K A +N T PA + +P +NT K P +T+ P T
Sbjct: 716 IRLNNRKAKLARANKQTGPAHDNNSSGDLPESPGDENTWQQKPSTPIKDQTVTETPKTG- 774
Query: 275 TSLTRTVTNPREAI 316
+L RT ++ E I
Sbjct: 775 ENLMRTSSSSEEGI 788
>At2g22680.1 68415.m02688 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profiles PF00097: Zinc
finger, C3HC4 type (RING finger), PF00092: von
Willebrand factor type A domain
Length = 683
Score = 28.7 bits (61), Expect = 2.4
Identities = 22/66 (33%), Positives = 33/66 (50%)
Frame = +2
Query: 89 SGQIQLRHHPXKATSNSTTRPATEFTPRLKVPSRTSTQNTPPSKLRVPTSTLPLTDNPST 268
+G LR AT+ STT + TP+LK + T+ + TP ++ V +L + S
Sbjct: 53 TGTYSLRCRTSTATAVSTTS-SLPGTPKLKCKTTTTGETTPRNRSLV---SLLTPSSSSI 108
Query: 269 SPTSLT 286
SP S T
Sbjct: 109 SPASFT 114
>At1g62500.1 68414.m07052 protease inhibitor/seed storage/lipid
transfer protein (LTP) family protein similar to auxin
down regulated GB:X69640 GI:296442 from [Glycine max];
contains Pfam profile PF00234: Protease inhibitor/seed
storage/LTP family
Length = 297
Score = 28.3 bits (60), Expect = 3.1
Identities = 20/65 (30%), Positives = 26/65 (40%)
Frame = +2
Query: 146 RPATEFTPRLKVPSRTSTQNTPPSKLRVPTSTLPLTDNPSTSPTSLTRTVTNPREAICPP 325
RP P + +P T P L P +T P P T+P L VT P + PP
Sbjct: 118 RPPPITRPPIIIPPIQPPPVTTPPGLLPPITTPPGLLPPVTTPPGLLPPVTTP-PGLLPP 176
Query: 326 LTQFP 340
+ P
Sbjct: 177 IINPP 181
Score = 26.6 bits (56), Expect = 9.5
Identities = 16/53 (30%), Positives = 20/53 (37%)
Frame = +2
Query: 167 PRLKVPSRTSTQNTPPSKLRVPTSTLPLTDNPSTSPTSLTRTVTNPREAICPP 325
P + P T P L P +T P P T+P L + NP PP
Sbjct: 135 PPVTTPPGLLPPITTPPGLLPPVTTPPGLLPPVTTPPGLLPPIINPPPVTVPP 187
>At1g01320.1 68414.m00048 tetratricopeptide repeat (TPR)-containing
protein low similarity to SP|P46825 Kinesin light chain
(KLC) {Loligo pealeii}; contains Pfam profile PF00515:
TPR Domain
Length = 1797
Score = 28.3 bits (60), Expect = 3.1
Identities = 16/38 (42%), Positives = 18/38 (47%)
Frame = +2
Query: 149 PATEFTPRLKVPSRTSTQNTPPSKLRVPTSTLPLTDNP 262
P+ TP L P S PP VPTST P+T P
Sbjct: 1609 PSPPTTPNLMQPM--SFVYPPPYSQSVPTSTYPVTSGP 1644
>At4g00890.1 68417.m00120 proline-rich family protein contains
proline-rich extensin domains, INTERPRO:IPR002965
Length = 431
Score = 27.9 bits (59), Expect = 4.1
Identities = 18/64 (28%), Positives = 27/64 (42%), Gaps = 2/64 (3%)
Frame = +2
Query: 140 TTRPATEFTPR--LKVPSRTSTQNTPPSKLRVPTSTLPLTDNPSTSPTSLTRTVTNPREA 313
TT P T +P LK + +Q +PP + V T P + + + P+EA
Sbjct: 121 TTEPKTPLSPSSTLKATEESQSQPSPPLESIVETWFRPSPPTSTETGDETQLPIPPPQEA 180
Query: 314 ICPP 325
PP
Sbjct: 181 KTPP 184
>At3g28790.1 68416.m03593 expressed protein
Length = 608
Score = 27.9 bits (59), Expect = 4.1
Identities = 17/53 (32%), Positives = 23/53 (43%), Gaps = 1/53 (1%)
Frame = +2
Query: 131 SNSTTRPATEFTPRLKVPS-RTSTQNTPPSKLRVPTSTLPLTDNPSTSPTSLT 286
S+S P+ TP P+ T T +TP P++ P T PST T
Sbjct: 269 SSSGASPSGSPTPTPSTPTPSTPTPSTPTPSTPTPSTPTPSTPAPSTPAAGKT 321
Score = 27.1 bits (57), Expect = 7.2
Identities = 15/40 (37%), Positives = 19/40 (47%)
Frame = +2
Query: 185 SRTSTQNTPPSKLRVPTSTLPLTDNPSTSPTSLTRTVTNP 304
S T T +TP P++ P T PST PT T + P
Sbjct: 278 SPTPTPSTPTPSTPTPSTPTPSTPTPST-PTPSTPAPSTP 316
>At3g13380.1 68416.m01683 leucine-rich repeat family protein /
protein kinase family protein contains Pfam domains
PF00560: Leucine Rich Repeat and PF00069: Protein kinase
domain
Length = 1164
Score = 27.9 bits (59), Expect = 4.1
Identities = 17/41 (41%), Positives = 18/41 (43%)
Frame = -2
Query: 342 LGNWVRGGQMASLGLVTVLVSDVGEVDGLSVRGSVLVGTLN 220
LGNW G V S G V GL +R L GTLN
Sbjct: 53 LGNWRYGSGRDPCTWRGVSCSSDGRVIGLDLRNGGLTGTLN 93
>At1g64080.1 68414.m07259 expressed protein identical to
hypothetical protein GB:AAF24565 GI:6692100 from
[Arabidopsis thaliana]
Length = 411
Score = 27.9 bits (59), Expect = 4.1
Identities = 25/89 (28%), Positives = 41/89 (46%), Gaps = 9/89 (10%)
Frame = +2
Query: 74 RVRRPSGQIQLRHHPXKATSNSTTRPATEFTPRLKVPSRTSTQNTPPSKLRVPTSTLPL- 250
RV R G+ +LRH + T+ S+ R E + P T T N P + + +P +
Sbjct: 280 RVSRRYGE-KLRHS-GQLTAPSSARSTAE---KADSPVATKTNNKPGNNINIPAGLKVVR 334
Query: 251 --------TDNPSTSPTSLTRTVTNPREA 313
+ + +T+P+S T TVT E+
Sbjct: 335 KHLGKSRSSSSTATTPSSTTATVTTQSES 363
>At1g26450.1 68414.m03226 beta-1,3-glucanase-related similar to
beta-1,3-glucanase GI:15150341 from [Camellia sinensis];
C-terminal homology only
Length = 197
Score = 27.9 bits (59), Expect = 4.1
Identities = 21/75 (28%), Positives = 32/75 (42%), Gaps = 5/75 (6%)
Frame = +2
Query: 89 SGQIQLRHHPXKATSNSTTRPATEFTPRLKVPSR-TSTQNTP----PSKLRVPTSTLPLT 253
+G + P TS+ + ++ TP PS ST +P PS STLP
Sbjct: 86 NGAAVISTSPPSTTSSCLSSSSSNGTPTAGYPSTGNSTTASPGTTNPSTGNSTNSTLPTN 145
Query: 254 DNPSTSPTSLTRTVT 298
D P++S + + T
Sbjct: 146 DKPTSSTITFPDSTT 160
>At1g10620.1 68414.m01204 protein kinase family protein contains
serine/threonine protein kinases active-site signature,
PROSITE:PS00108
Length = 718
Score = 27.9 bits (59), Expect = 4.1
Identities = 22/76 (28%), Positives = 28/76 (36%), Gaps = 1/76 (1%)
Frame = +2
Query: 116 PXKATSNSTTRPATEFTPRLKVPSRTSTQNTPPSKLRVPTSTLPLTDNPSTSPTSLTRTV 295
P + ++ PAT P P T+ TPPS P S P P P + T
Sbjct: 51 PPSPDTQTSPPPATAAQPPPNQPPNTTPPPTPPSS--PPPSITPPPSPPQPQPPPQS-TP 107
Query: 296 TNPREAICP-PLTQFP 340
T + P P Q P
Sbjct: 108 TGDSPVVIPFPKPQLP 123
>At5g27870.1 68418.m03343 pectinesterase family protein similar to
pectinesterase (EC 3.1.1.11) from Salix gilgiana
GI:6714532, Lycopersicon esculentum SP|Q43143, Phaseolus
vulgaris SP|Q43111; contains Pfam profile PF01095
pectinesterase
Length = 732
Score = 27.5 bits (58), Expect = 5.4
Identities = 17/55 (30%), Positives = 25/55 (45%), Gaps = 2/55 (3%)
Frame = +2
Query: 116 PXKATSNSTTRPATEFTPRLKVPSRTSTQNT--PPSKLRVPTSTLPLTDNPSTSP 274
P + ST+ PA PS + +T P +L P +T + +PSTSP
Sbjct: 589 PSTVVTPSTSPPAGHLGSPSDTPSSVVSPSTSLPAGQLGAPPATPSMVVSPSTSP 643
>At3g59550.1 68416.m06646 cohesion family protein SYN3 (SYN3) nearly
identical to cohesion family protein SYN3 [Arabidopsis
thaliana] GI:12006362; supporting cDNA
gi|12006361|gb|AF281155.1|AF281155
Length = 693
Score = 27.5 bits (58), Expect = 5.4
Identities = 17/41 (41%), Positives = 20/41 (48%), Gaps = 5/41 (12%)
Frame = +3
Query: 306 GKP-SAHPSPNSRGD----RPRSCLHRGPPPQPLRRGKKSR 413
G P SA S R D P+ L PPPQP RR +K +
Sbjct: 318 GSPGSAAGSEEERADFVHPSPQLVLQPSPPPQPQRRARKRK 358
>At3g19430.1 68416.m02464 late embryogenesis abundant
protein-related / LEA protein-related similar to late
embryogenesis abundant protein [Picea glauca] GI:1350543
Length = 559
Score = 27.5 bits (58), Expect = 5.4
Identities = 17/60 (28%), Positives = 24/60 (40%), Gaps = 1/60 (1%)
Frame = +2
Query: 164 TPRLKVPSRTSTQNTPPSKLRVPTSTLPLTDNPSTSPTSLTRTVTNPREAI-CPPLTQFP 340
+P VP+ PP PT T + P +PT T +V +P + PP P
Sbjct: 164 SPTPPVPTDPMPSPPPPVSPPPPTPTPSVPSPPDVTPTPPTPSVPSPPDVTPTPPTPSVP 223
>At2g20310.1 68415.m02372 expressed protein
Length = 430
Score = 27.5 bits (58), Expect = 5.4
Identities = 16/42 (38%), Positives = 24/42 (57%)
Frame = +2
Query: 179 VPSRTSTQNTPPSKLRVPTSTLPLTDNPSTSPTSLTRTVTNP 304
+P+ S++ TP S LRVP +TL ++ P S + V NP
Sbjct: 185 MPTAPSSKPTP-SILRVPKNTLLRKNHVEIRPCSSSTRVANP 225
>At1g28200.1 68414.m03461 GRAM domain-containing protein /
ABA-responsive protein-related similar to ABA-responsive
protein [Hordeum vulgare] GI:4103635; contains Pfam
profile PF02893: GRAM domain
Length = 259
Score = 27.5 bits (58), Expect = 5.4
Identities = 16/59 (27%), Positives = 25/59 (42%), Gaps = 4/59 (6%)
Frame = +2
Query: 125 ATSNSTTRPATEFTPRLKVPSRTSTQNTPPSKLRVPT----STLPLTDNPSTSPTSLTR 289
A ++ ++ A + P T TPP +PT +T+P NP SP+ R
Sbjct: 17 AAASEPSKAAAHSSDYAPYPKLDPTDVTPPPPQPIPTGAAATTMPAESNPYVSPSPAPR 75
>At1g09460.1 68414.m01058 glucan endo-1,3-beta-glucosidase-related
similar to glucan endo-1,3-beta-glucosidase precursor
SP:P52409 from [Triticum aestivum]
Length = 330
Score = 27.5 bits (58), Expect = 5.4
Identities = 24/70 (34%), Positives = 29/70 (41%), Gaps = 2/70 (2%)
Frame = +2
Query: 125 ATSNSTTRPATEFTPRLKVPSRTSTQNTPPSKLRVPTSTLPLTDNPSTS--PTSLTRTVT 298
AT+ P T P P T PP L P T P+T NP T PT + TV
Sbjct: 60 ATTVPIVPPVTTIPPPTLTPPPVIT--IPPPTLTPPV-TNPVT-NPVTQYPPTQPSGTVP 115
Query: 299 NPREAICPPL 328
P + PP+
Sbjct: 116 VPVPVVAPPV 125
>At5g58160.1 68418.m07280 formin homology 2 domain-containing
protein / FH2 domain-containing protein low similarity
to SP|Q05858 Formin (Limb deformity protein) {Gallus
gallus}; contains Pfam profile PF02181: Formin Homology
2(FH2) Domain
Length = 1307
Score = 27.1 bits (57), Expect = 7.2
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = +3
Query: 306 GKPSAHPSPNSRGDRPRSCLHRGPPPQP 389
G+P+ P P S D+ + L R PPP P
Sbjct: 668 GQPARSPPPISNSDK-KPALPRPPPPPP 694
>At5g22990.1 68418.m02687 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 324
Score = 27.1 bits (57), Expect = 7.2
Identities = 11/24 (45%), Positives = 16/24 (66%)
Frame = +2
Query: 251 TDNPSTSPTSLTRTVTNPREAICP 322
++NP S S+T+T+TN AI P
Sbjct: 101 SNNPHLSQISITQTITNSYSAIVP 124
>At3g10070.1 68416.m01207 transcription initiation factor IID
(TFIID) subunit A family protein similar to hypothetical
protein GB:CAB10099 [Schizosaccharomyces pombe];
contains Pfam profile PF03847: Transcription initiation
factor TFIID subunit A
Length = 539
Score = 27.1 bits (57), Expect = 7.2
Identities = 23/71 (32%), Positives = 34/71 (47%), Gaps = 10/71 (14%)
Frame = +2
Query: 122 KATSNSTTRPATEFTPRLKVPSR-TSTQNTP-----PSKL--RVPTSTLPLTD--NPSTS 271
+ +S ++ P T P PS T Q TP PS + +P+S P + NP+ +
Sbjct: 5 RQSSTASQPPETPPQPSDSKPSTLTQIQPTPSTNPSPSSVVSSIPSSPAPQSPSLNPNPN 64
Query: 272 PTSLTRTVTNP 304
P TR VT+P
Sbjct: 65 PPQYTRPVTSP 75
>At2g40070.1 68415.m04923 expressed protein
Length = 607
Score = 27.1 bits (57), Expect = 7.2
Identities = 20/81 (24%), Positives = 38/81 (46%), Gaps = 6/81 (7%)
Frame = +2
Query: 122 KATSNSTTR---PATEFTPRLKVPSRTSTQNTPPSKLRVPTSTLPLTDNPSTSP---TSL 283
++T ++TT+ P+ TP + +R+ST + P+ P+ T+ + P+ P S
Sbjct: 269 RSTPSTTTKSAGPSRSTTPLSRSTARSSTPTSRPT--LPPSKTISRSSTPTRRPIASASA 326
Query: 284 TRTVTNPREAICPPLTQFPRR 346
T NP + P + P +
Sbjct: 327 ATTTANPTISQIKPSSPAPAK 347
>At2g29780.1 68415.m03618 kelch repeat-containing F-box family
protein similar to SKP1 interacting partner 6
[Arabidopsis thaliana] GI:10716957; contains Pfam
profiles PF01344: Kelch motif, PF00646: F-box domain
Length = 398
Score = 27.1 bits (57), Expect = 7.2
Identities = 19/57 (33%), Positives = 32/57 (56%), Gaps = 4/57 (7%)
Frame = +1
Query: 247 PDGQPIDLAYVADENGYQPQG--SHLPTPHPIPEA-IARALAYIE-AHPPSPSVVER 405
P+ +P +L E+ +Q + +H P P IP+A I R +A I+ H PS S++ +
Sbjct: 17 PNKKPEELHKNPKEDDHQEEEVENHPPIPRQIPQALIRRTVALIKRCHYPSLSLLSK 73
>At2g18050.1 68415.m02098 histone H1-3 (HIS1-3) similar to histone
H1 [Lycopersicon pennellii] SWISS-PROT:P40267; identical
to cDNA histone H1-3 (His1-3) GI:1809314, histone H1-3
[Arabidopsis thaliana] GI:1809305
Length = 167
Score = 27.1 bits (57), Expect = 7.2
Identities = 11/53 (20%), Positives = 24/53 (45%)
Frame = +2
Query: 164 TPRLKVPSRTSTQNTPPSKLRVPTSTLPLTDNPSTSPTSLTRTVTNPREAICP 322
TP K P + T PP + + + L + +SP ++ + + +++ P
Sbjct: 10 TPAAKKPRKPKTTTHPPYFQMIKEALMVLKEKNGSSPYAIAKKIEEKHKSLLP 62
>At2g14890.2 68415.m01692 arabinogalactan-protein (AGP9) identical
to gi|10880495|gb|AAG24277
Length = 176
Score = 27.1 bits (57), Expect = 7.2
Identities = 24/74 (32%), Positives = 30/74 (40%), Gaps = 3/74 (4%)
Frame = +2
Query: 128 TSNSTTRPATEFTPRLKVPSRTSTQNTPPSKLRVP---TSTLPLTDNPSTSPTSLTRTVT 298
T + T P T TP P+ TPP P TS P+T P P + V+
Sbjct: 19 TGQAPTSPPTA-TPAPPTPTTPPPAATPPPVSAPPPVTTSPPPVTTAPP--PANPPPPVS 75
Query: 299 NPREAICPPLTQFP 340
+P A PP T P
Sbjct: 76 SPPPASPPPATPPP 89
>At2g14890.1 68415.m01693 arabinogalactan-protein (AGP9) identical
to gi|10880495|gb|AAG24277
Length = 191
Score = 27.1 bits (57), Expect = 7.2
Identities = 24/74 (32%), Positives = 30/74 (40%), Gaps = 3/74 (4%)
Frame = +2
Query: 128 TSNSTTRPATEFTPRLKVPSRTSTQNTPPSKLRVP---TSTLPLTDNPSTSPTSLTRTVT 298
T + T P T TP P+ TPP P TS P+T P P + V+
Sbjct: 19 TGQAPTSPPTA-TPAPPTPTTPPPAATPPPVSAPPPVTTSPPPVTTAPP--PANPPPPVS 75
Query: 299 NPREAICPPLTQFP 340
+P A PP T P
Sbjct: 76 SPPPASPPPATPPP 89
>At2g12940.1 68415.m01419 expressed protein
Length = 294
Score = 27.1 bits (57), Expect = 7.2
Identities = 23/68 (33%), Positives = 34/68 (50%), Gaps = 2/68 (2%)
Frame = +2
Query: 131 SNSTT--RPATEFTPRLKVPSRTSTQNTPPSKLRVPTSTLPLTDNPSTSPTSLTRTVTNP 304
S++TT RP + P L S +P S R ++LPL NPSTS S ++
Sbjct: 4 SDNTTPSRPWSITQPSLAFSSLPPLSPSPSSSRR---NSLPLM-NPSTSMESRDSSMRFK 59
Query: 305 REAICPPL 328
+ ++ PPL
Sbjct: 60 KNSLLPPL 67
>At1g72160.1 68414.m08343 SEC14 cytosolic factor family protein /
phosphoglyceride transfer family protein similar to
GI:807956 from [Saccharomyces cerevisiae]similar to
polyphosphoinositide binding protein Ssh2p (GI:2739046)
{Glycine max}; contains Pfam PF00650 : CRAL/TRIO domain;
contains Pfam PF03765 : CRAL/TRIO, N-terminus
Length = 490
Score = 27.1 bits (57), Expect = 7.2
Identities = 17/53 (32%), Positives = 25/53 (47%), Gaps = 1/53 (1%)
Frame = +2
Query: 155 TEFTP-RLKVPSRTSTQNTPPSKLRVPTSTLPLTDNPSTSPTSLTRTVTNPRE 310
T TP +L PS T ++ + ++ +PT T L T+P T T P E
Sbjct: 9 TLVTPEKLPSPSLTPSEVSESTQDALPTETETLEKVTETNPPETADTTTKPEE 61
>At1g23540.1 68414.m02960 protein kinase family protein contains
Pfam domain, PF00069: Protein kinase domain
Length = 720
Score = 27.1 bits (57), Expect = 7.2
Identities = 16/56 (28%), Positives = 26/56 (46%), Gaps = 1/56 (1%)
Frame = +2
Query: 116 PXKATSNSTTRPATEFTPRLKVPSRTSTQNTPPSK-LRVPTSTLPLTDNPSTSPTS 280
P TSN + P + P+ ++ N PPS+ L+ P + P + T+P S
Sbjct: 94 PPPPTSNESPSPPEDSETPPAPPNESNDNNPPPSQDLQSPPPSSPSPNVGPTNPES 149
>At5g53870.1 68418.m06701 plastocyanin-like domain-containing
protein contains similarity to SP|Q02917 Early nodulin
55-2 precursor {Glycine max}; PF02298: Plastocyanin-like
domain
Length = 370
Score = 26.6 bits (56), Expect = 9.5
Identities = 22/81 (27%), Positives = 37/81 (45%), Gaps = 8/81 (9%)
Frame = +2
Query: 131 SNSTTRPATEFTPRLKV-PSRTSTQNTPP----SKLRVPTSTLPLTDNPSTSP---TSLT 286
S S T+P +P V P+ +++ PP S + P S+ P++ P+ SP TS +
Sbjct: 144 SVSPTQPPKSHSPVSPVAPASAPSKSQPPRSSVSPAQPPKSSSPISHTPALSPSHATSHS 203
Query: 287 RTVTNPREAICPPLTQFPRRS 349
+P P++ P S
Sbjct: 204 PATPSPSPKSPSPVSHSPSHS 224
>At5g51800.1 68418.m06423 expressed protein
Length = 972
Score = 26.6 bits (56), Expect = 9.5
Identities = 15/37 (40%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
Frame = +2
Query: 191 TSTQNTPPSKLRVPT-STLPLTDNPSTSPTSLTRTVT 298
TS+ +PP +P+ ST+P S+SPT T VT
Sbjct: 71 TSSGLSPPQWKALPSPSTVPTASTISSSPTPSTAVVT 107
>At5g41620.1 68418.m05057 expressed protein weak similarity to
microtubule binding protein D-CLIP-190 (GI:2773363)
[Drosophila melanogaster]; weak similarity to
Synaptonemal complex protein 1 (SCP-1 protein)
(Swiss-Prot:Q15431) [Homo sapiens]; weak similarity to
DNA double-strand break repair rad50 ATPase.
(Swiss-Prot:P58301) [Pyrococcus furiosus]
Length = 543
Score = 26.6 bits (56), Expect = 9.5
Identities = 19/74 (25%), Positives = 32/74 (43%)
Frame = +2
Query: 77 VRRPSGQIQLRHHPXKATSNSTTRPATEFTPRLKVPSRTSTQNTPPSKLRVPTSTLPLTD 256
+RR GQ+ ++HH +N +P + +S + T +K P+S+L
Sbjct: 50 LRRQIGQMLIKHHQSIDRNNHALQPVS------PASYGSSLEVTTYNKAVTPSSSLEFRG 103
Query: 257 NPSTSPTSLTRTVT 298
PS P +T T
Sbjct: 104 RPSREPHYNLKTST 117
>At5g25270.1 68418.m02996 expressed protein
Length = 540
Score = 26.6 bits (56), Expect = 9.5
Identities = 12/42 (28%), Positives = 20/42 (47%)
Frame = +2
Query: 179 VPSRTSTQNTPPSKLRVPTSTLPLTDNPSTSPTSLTRTVTNP 304
VP+ + Q + + P T+P T + +T P TR + P
Sbjct: 307 VPASGTNQREESTTQQTPGQTIPSTPSSTTDPAPSTRGPSEP 348
>At4g01810.1 68417.m00238 protein transport protein-related related
to Sec23 protein [Homo sapiens] gi|1296664|emb|CAA65774
Length = 880
Score = 26.6 bits (56), Expect = 9.5
Identities = 13/32 (40%), Positives = 13/32 (40%)
Frame = +2
Query: 167 PRLKVPSRTSTQNTPPSKLRVPTSTLPLTDNP 262
PRL P NTP VP T P T P
Sbjct: 81 PRLSTPPGPPVFNTPVKPAAVPFRTSPATPQP 112
>At3g02540.2 68416.m00243 ubiquitin family protein contains Pfam
profiles PF00240: Ubiquitin family, PF00627: UBA/TS-N
domain;
Length = 299
Score = 26.6 bits (56), Expect = 9.5
Identities = 16/59 (27%), Positives = 27/59 (45%)
Frame = +2
Query: 128 TSNSTTRPATEFTPRLKVPSRTSTQNTPPSKLRVPTSTLPLTDNPSTSPTSLTRTVTNP 304
TS + + P + P + P ++ + P + PT P P+ +P + T TVT P
Sbjct: 91 TSQAKSIPPSTSQPSIS-PQTPASVSAPVAP--APTRPPPPAPTPTPAPVAATETVTTP 146
>At3g02540.1 68416.m00242 ubiquitin family protein contains Pfam
profiles PF00240: Ubiquitin family, PF00627: UBA/TS-N
domain;
Length = 419
Score = 26.6 bits (56), Expect = 9.5
Identities = 16/59 (27%), Positives = 27/59 (45%)
Frame = +2
Query: 128 TSNSTTRPATEFTPRLKVPSRTSTQNTPPSKLRVPTSTLPLTDNPSTSPTSLTRTVTNP 304
TS + + P + P + P ++ + P + PT P P+ +P + T TVT P
Sbjct: 91 TSQAKSIPPSTSQPSIS-PQTPASVSAPVAP--APTRPPPPAPTPTPAPVAATETVTTP 146
>At2g15740.1 68415.m01802 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 329
Score = 26.6 bits (56), Expect = 9.5
Identities = 12/28 (42%), Positives = 17/28 (60%)
Frame = +2
Query: 248 LTDNPSTSPTSLTRTVTNPREAICPPLT 331
+T+NP + S T+T+TN AI P T
Sbjct: 91 ITNNPHFTRVSFTQTITNKFTAIVPTNT 118
>At1g80490.2 68414.m09430 WD-40 repeat family protein contains 9
WD-40 repeats domain (PF00400) (6 weak)
Length = 1120
Score = 26.6 bits (56), Expect = 9.5
Identities = 14/39 (35%), Positives = 20/39 (51%), Gaps = 3/39 (7%)
Frame = +1
Query: 244 SPDGQPIDLAYVADENGYQPQGSH---LPTPHPIPEAIA 351
SP P+ L + G+ P G+H PTP P+P +A
Sbjct: 214 SPVNNPL-LGSLPKAEGFPPLGAHGPFQPTPSPVPTPLA 251
>At1g80490.1 68414.m09429 WD-40 repeat family protein contains 9
WD-40 repeats domain (PF00400) (6 weak)
Length = 1120
Score = 26.6 bits (56), Expect = 9.5
Identities = 14/39 (35%), Positives = 20/39 (51%), Gaps = 3/39 (7%)
Frame = +1
Query: 244 SPDGQPIDLAYVADENGYQPQGSH---LPTPHPIPEAIA 351
SP P+ L + G+ P G+H PTP P+P +A
Sbjct: 214 SPVNNPL-LGSLPKAEGFPPLGAHGPFQPTPSPVPTPLA 251
>At1g30320.1 68414.m03708 remorin family protein contains Pfam
domain, PF03763: Remorin, C-terminal region
Length = 509
Score = 26.6 bits (56), Expect = 9.5
Identities = 16/34 (47%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
Frame = +2
Query: 155 TEFTP-RLKVPSRTSTQNTPPSKLRVPTSTLPLT 253
TE TP + PSR+ T + LR PTS+LP T
Sbjct: 292 TEMTPIPSQEPSRSVTPVGATTPLRSPTSSLPST 325
>At1g26150.1 68414.m03192 protein kinase family protein similar to
Pto kinase interactor 1 GI:3668069 from [Lycopersicon
esculentum]
Length = 760
Score = 26.6 bits (56), Expect = 9.5
Identities = 10/31 (32%), Positives = 14/31 (45%)
Frame = +2
Query: 182 PSRTSTQNTPPSKLRVPTSTLPLTDNPSTSP 274
P+R T PP P + P + P +SP
Sbjct: 41 PTREPTNGNPPETTNTPAQSSPPPETPLSSP 71
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,111,115
Number of Sequences: 28952
Number of extensions: 212170
Number of successful extensions: 1092
Number of sequences better than 10.0: 77
Number of HSP's better than 10.0 without gapping: 925
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1069
length of database: 12,070,560
effective HSP length: 76
effective length of database: 9,870,208
effective search space used: 898188928
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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