Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P01_F_L06
(676 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY887136-1|AAW78361.1| 580|Tribolium castaneum vasa RNA helicas... 69 4e-14
U09586-2|AAC47271.1| 712|Tribolium castaneum protease, reverse ... 23 2.3
AJ005083-1|CAB65469.1| 585|Tribolium castaneum signal receptor ... 23 3.0
AY873916-1|AAW67572.1| 377|Tribolium castaneum chitinase 6 prot... 22 5.3
AY769607-1|AAV40983.1| 196|Tribolium castaneum heat shock cogna... 21 7.0
AY769606-1|AAV40982.1| 196|Tribolium castaneum heat shock prote... 21 7.0
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro... 21 9.2
AY337337-2|AAP94193.1| 491|Tribolium castaneum cytochrome P450 ... 21 9.2
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ... 21 9.2
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ... 21 9.2
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ... 21 9.2
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ... 21 9.2
AF251548-1|AAF70178.1| 491|Tribolium castaneum cytochrome P450 ... 21 9.2
>AY887136-1|AAW78361.1| 580|Tribolium castaneum vasa RNA helicase
protein.
Length = 580
Score = 68.9 bits (161), Expect = 4e-14
Identities = 36/100 (36%), Positives = 57/100 (57%), Gaps = 4/100 (4%)
Frame = +1
Query: 388 EVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLXGVXQT 567
EV V+G + PI FE + ++ + VK GY +PT IQ P+ +SG++L QT
Sbjct: 145 EVKVTGNDAPPPITSFETSGLRPHLLENVKKSGYTKPTAIQKYAIPVILSGRDLMSCAQT 204
Query: 568 GSGKTLAYILPAIVHI--NNQPPIRRGD--GPIAXVLAPT 675
GSGKT A++LP I ++ + PP + P+ +++PT
Sbjct: 205 GSGKTAAFMLPIIHNLLSDKNPPNTENNCAQPVVVIMSPT 244
>U09586-2|AAC47271.1| 712|Tribolium castaneum protease, reverse
transcriptase andRNase H protein.
Length = 712
Score = 23.0 bits (47), Expect = 2.3
Identities = 10/28 (35%), Positives = 14/28 (50%)
Frame = -2
Query: 135 TAIIPITRHDYFSDLVEDVXLNYGCXLT 52
T IP DY DLV + +N+ +T
Sbjct: 215 TTEIPPEPEDYVEDLVGHIEVNHSAPIT 242
>AJ005083-1|CAB65469.1| 585|Tribolium castaneum signal receptor
protein protein.
Length = 585
Score = 22.6 bits (46), Expect = 3.0
Identities = 8/19 (42%), Positives = 11/19 (57%)
Frame = -1
Query: 625 VGYLCAQWLARCRPTFCRN 569
+GY+C + CRP C N
Sbjct: 253 LGYICEINVDDCRPGACHN 271
>AY873916-1|AAW67572.1| 377|Tribolium castaneum chitinase 6
protein.
Length = 377
Score = 21.8 bits (44), Expect = 5.3
Identities = 11/29 (37%), Positives = 16/29 (55%)
Frame = +2
Query: 191 GLATVAIDLEDLEALVGKKNSLEGRTCDA 277
G+ +I+ +DL A G KN+L DA
Sbjct: 345 GVMIWSIETDDLHATCGTKNALLHAVNDA 373
>AY769607-1|AAV40983.1| 196|Tribolium castaneum heat shock cognate
70 protein.
Length = 196
Score = 21.4 bits (43), Expect = 7.0
Identities = 10/53 (18%), Positives = 23/53 (43%)
Frame = -2
Query: 237 TKASRSSKSIATVAKPRRIIAEFVASSKFGTTVSTAIIPITRHDYFSDLVEDV 79
T+ R+ +++++ + I + TT++ A DYF ++ V
Sbjct: 93 TQCERAKRTLSSATQASIEIDSLFDGIDYSTTITRARFEDINMDYFKKCIDPV 145
>AY769606-1|AAV40982.1| 196|Tribolium castaneum heat shock protein
70 protein.
Length = 196
Score = 21.4 bits (43), Expect = 7.0
Identities = 10/53 (18%), Positives = 23/53 (43%)
Frame = -2
Query: 237 TKASRSSKSIATVAKPRRIIAEFVASSKFGTTVSTAIIPITRHDYFSDLVEDV 79
T+ R+ +++++ + I + TT++ A DYF ++ V
Sbjct: 93 TQCERAKRTLSSATQASIEIDSLFDGIDYSTTITRARFEDINMDYFKKCIDPV 145
>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
Length = 2700
Score = 21.0 bits (42), Expect = 9.2
Identities = 7/23 (30%), Positives = 11/23 (47%)
Frame = -2
Query: 624 LVIYVHNGWQDVGQRFAGTRLGY 556
L++ H+ W D +F GY
Sbjct: 1442 LIVKAHDSWADFDNQFYKRVTGY 1464
>AY337337-2|AAP94193.1| 491|Tribolium castaneum cytochrome P450
monooxygenase protein.
Length = 491
Score = 21.0 bits (42), Expect = 9.2
Identities = 7/17 (41%), Positives = 10/17 (58%)
Frame = -3
Query: 584 NVLPEPVWXTPXKFFPD 534
NV P+P P +F P+
Sbjct: 399 NVFPDPEKFDPDRFLPE 415
>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
variant 2 protein.
Length = 1558
Score = 21.0 bits (42), Expect = 9.2
Identities = 7/17 (41%), Positives = 11/17 (64%)
Frame = -1
Query: 298 VKQNPNLGVACSALQRI 248
+K+N NLG AC + +
Sbjct: 752 MKKNRNLGAACGRIHPV 768
>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
variant 1 protein.
Length = 1558
Score = 21.0 bits (42), Expect = 9.2
Identities = 7/17 (41%), Positives = 11/17 (64%)
Frame = -1
Query: 298 VKQNPNLGVACSALQRI 248
+K+N NLG AC + +
Sbjct: 752 MKKNRNLGAACGRIHPV 768
>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
CHS1B protein.
Length = 1558
Score = 21.0 bits (42), Expect = 9.2
Identities = 7/17 (41%), Positives = 11/17 (64%)
Frame = -1
Query: 298 VKQNPNLGVACSALQRI 248
+K+N NLG AC + +
Sbjct: 752 MKKNRNLGAACGRIHPV 768
>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
CHS1A protein.
Length = 1558
Score = 21.0 bits (42), Expect = 9.2
Identities = 7/17 (41%), Positives = 11/17 (64%)
Frame = -1
Query: 298 VKQNPNLGVACSALQRI 248
+K+N NLG AC + +
Sbjct: 752 MKKNRNLGAACGRIHPV 768
>AF251548-1|AAF70178.1| 491|Tribolium castaneum cytochrome P450
monooxigenase CYP4Q4 protein.
Length = 491
Score = 21.0 bits (42), Expect = 9.2
Identities = 7/17 (41%), Positives = 10/17 (58%)
Frame = -3
Query: 584 NVLPEPVWXTPXKFFPD 534
NV P+P P +F P+
Sbjct: 399 NVFPDPEKFDPDRFLPE 415
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 151,354
Number of Sequences: 336
Number of extensions: 3267
Number of successful extensions: 13
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17593745
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -