Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P01_F_L06
(676 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_16431| Best HMM Match : No HMM Matches (HMM E-Value=.) 129 2e-30
SB_43842| Best HMM Match : RNB (HMM E-Value=0) 92 4e-19
SB_45898| Best HMM Match : DEAD (HMM E-Value=1.3e-36) 88 7e-18
SB_18993| Best HMM Match : DEAD (HMM E-Value=9.3e-41) 79 3e-15
SB_19958| Best HMM Match : No HMM Matches (HMM E-Value=.) 69 3e-12
SB_14524| Best HMM Match : DEAD (HMM E-Value=3.7e-17) 68 6e-12
SB_25090| Best HMM Match : No HMM Matches (HMM E-Value=.) 66 3e-11
SB_3952| Best HMM Match : No HMM Matches (HMM E-Value=.) 64 1e-10
SB_52320| Best HMM Match : DEAD (HMM E-Value=0) 59 3e-09
SB_5994| Best HMM Match : zf-CCHC (HMM E-Value=2.2e-19) 56 3e-08
SB_30826| Best HMM Match : No HMM Matches (HMM E-Value=.) 55 6e-08
SB_40196| Best HMM Match : DEAD (HMM E-Value=3.5e-07) 50 1e-06
SB_51015| Best HMM Match : DEAD (HMM E-Value=0.0057) 50 2e-06
SB_46680| Best HMM Match : Helicase_C (HMM E-Value=3.8e-22) 50 2e-06
SB_11691| Best HMM Match : No HMM Matches (HMM E-Value=.) 50 2e-06
SB_17563| Best HMM Match : DEAD (HMM E-Value=0) 47 2e-05
SB_2247| Best HMM Match : DEAD (HMM E-Value=0) 47 2e-05
SB_57459| Best HMM Match : DEAD (HMM E-Value=1.50001e-40) 46 3e-05
SB_9558| Best HMM Match : DEAD (HMM E-Value=0) 46 4e-05
SB_18655| Best HMM Match : No HMM Matches (HMM E-Value=.) 46 4e-05
SB_41683| Best HMM Match : DEAD (HMM E-Value=1.5e-27) 43 2e-04
SB_37351| Best HMM Match : DEAD (HMM E-Value=0) 42 5e-04
SB_32980| Best HMM Match : DEAD (HMM E-Value=0) 37 0.013
SB_34731| Best HMM Match : DEAD (HMM E-Value=3.8e-31) 37 0.017
SB_52411| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.052
SB_5719| Best HMM Match : Helicase_C (HMM E-Value=1e-24) 35 0.069
SB_38262| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.069
SB_51441| Best HMM Match : DEAD (HMM E-Value=4.9e-19) 32 0.49
SB_49218| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.1
SB_52637| Best HMM Match : Cpn60_TCP1 (HMM E-Value=0) 30 1.5
SB_3046| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.0
SB_44408| Best HMM Match : DEAD (HMM E-Value=6.8005e-42) 29 2.6
SB_6554| Best HMM Match : Isy1 (HMM E-Value=0) 29 3.4
>SB_16431| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 790
Score = 129 bits (312), Expect = 2e-30
Identities = 55/133 (41%), Positives = 84/133 (63%)
Frame = +1
Query: 277 PDWDSVSLQPFNKNFYDPHPTVLKRSPYEVEEYRNKHEVTVSGVEVHNPIQYFEEANFPD 456
P+ + +PFNKNFY+ HP + K+S E+++ R K + VSG P F F +
Sbjct: 467 PEKSKIDYKPFNKNFYEEHPEITKQSKQEIDDLRKKMGIKVSGAMPARPCISFAHFGFDE 526
Query: 457 YVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLXGVXQTGSGKTLAYILPAIVHINNQPPIR 636
+ ++ + Y +PT IQ Q PIA+SG+++ G+ +TGSGKT A++ PA+VHI +QP ++
Sbjct: 527 QMMASIRKLEYTQPTQIQCQALPIALSGRDIIGIAKTGSGKTAAFLWPALVHIMDQPELQ 586
Query: 637 RGDGPIAXVLAPT 675
GDGPI + APT
Sbjct: 587 VGDGPIVLICAPT 599
>SB_43842| Best HMM Match : RNB (HMM E-Value=0)
Length = 1238
Score = 91.9 bits (218), Expect = 4e-19
Identities = 44/123 (35%), Positives = 69/123 (56%)
Frame = +1
Query: 307 FNKNFYDPHPTVLKRSPYEVEEYRNKHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMG 486
F ++YD + V + S V+E R K+ + + G + PI+ F + N P + +
Sbjct: 32 FMWSYYDENEKVSRLSDEVVDEIRWKNGIHIEGEDCPKPIESFHDLNLPPELSTYLAKKN 91
Query: 487 YKEPTPIQAQGWPIAMSGKNLXGVXQTGSGKTLAYILPAIVHINNQPPIRRGDGPIAXVL 666
++ PTPIQ Q MSG+++ G+ +TGSGKTLAY LP + + + P GD P+A +L
Sbjct: 92 FQVPTPIQMQSLSCVMSGRDIIGLAETGSGKTLAYSLPLCMLLRTKAPSNPGDTPVALIL 151
Query: 667 APT 675
PT
Sbjct: 152 TPT 154
>SB_45898| Best HMM Match : DEAD (HMM E-Value=1.3e-36)
Length = 428
Score = 87.8 bits (208), Expect = 7e-18
Identities = 42/105 (40%), Positives = 63/105 (60%), Gaps = 4/105 (3%)
Frame = +1
Query: 373 YRNKHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLX 552
+R ++ G + PI+ ++EA PD + + V +GYK+PTPIQ Q PI + +++
Sbjct: 83 FREDFNISTKGGRIPFPIRKWKEAQIPDSILEIVDKLGYKDPTPIQRQAIPIGLQNRDII 142
Query: 553 GVXQTGSGKTLAYILPAIVHINNQPPIRRGD----GPIAXVLAPT 675
GV +TGSGKT A+ +P +V I P I R + GP A +LAPT
Sbjct: 143 GVAETGSGKTAAFAIPLLVWIMGLPKIERDNDADQGPYALILAPT 187
>SB_18993| Best HMM Match : DEAD (HMM E-Value=9.3e-41)
Length = 690
Score = 79.0 bits (186), Expect = 3e-15
Identities = 46/109 (42%), Positives = 59/109 (54%)
Frame = +1
Query: 349 RSPYEVEEYRNKHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPI 528
R +EV+ YR ++TV+G V P+ FEE+ FPDY+Q K G+ EPT IQAQ
Sbjct: 57 RGQHEVDAYRRSKDLTVNGRNVPKPVTTFEESAFPDYIQSYFKREGFTEPTMIQAQ---- 112
Query: 529 AMSGKNLXGVXQTGSGKTLAYILPAIVHINNQPPIRRGDGPIAXVLAPT 675
+ILP IVHIN+QP ++ GDGPI VL PT
Sbjct: 113 --------------------FILPGIVHINHQPLLQPGDGPIVLVLCPT 141
>SB_19958| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 797
Score = 69.3 bits (162), Expect = 3e-12
Identities = 35/93 (37%), Positives = 48/93 (51%)
Frame = +1
Query: 397 VSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLXGVXQTGSG 576
VSG I F E F + + + GY+ PTP+Q PI M+G++L QTGSG
Sbjct: 469 VSGENQPPKITSFNELPFGEQLMANISRAGYRRPTPVQKAALPIVMAGRDLMACAQTGSG 528
Query: 577 KTLAYILPAIVHINNQPPIRRGDGPIAXVLAPT 675
KT AY+LP + + Q P+A +APT
Sbjct: 529 KTAAYMLPVLTSLIKQGLNAPPRSPLALCVAPT 561
>SB_14524| Best HMM Match : DEAD (HMM E-Value=3.7e-17)
Length = 500
Score = 68.1 bits (159), Expect = 6e-12
Identities = 31/88 (35%), Positives = 50/88 (56%)
Frame = +1
Query: 322 YDPHPTVLKRSPYEVEEYRNKHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPT 501
Y HPT+ + +V++ R+K E+ V G V +P+ F +F + + + + GY PT
Sbjct: 161 YKEHPTIAALTAEQVKQLRDKMEIKVKGEHVVSPVLEFFHCSFNESLSKNLSNHGYHSPT 220
Query: 502 PIQAQGWPIAMSGKNLXGVXQTGSGKTL 585
PIQ Q P+ +SG+++ TGSGK L
Sbjct: 221 PIQMQVLPVLLSGRDVMVCASTGSGKLL 248
>SB_25090| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1170
Score = 65.7 bits (153), Expect = 3e-11
Identities = 34/85 (40%), Positives = 50/85 (58%)
Frame = +1
Query: 367 EEYRNKHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKN 546
E+Y ++ EV VSG I FEEAN + V+ YK+PTP+Q PI ++G++
Sbjct: 692 EKY-DQIEVLVSGNNPVRHINSFEEANLYEAFLNNVRKAQYKKPTPVQKYSIPIVIAGRD 750
Query: 547 LXGVXQTGSGKTLAYILPAIVHINN 621
+ QTGSGKT A++LP + + N
Sbjct: 751 VMACAQTGSGKTAAFLLPVMTSMMN 775
>SB_3952| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 592
Score = 63.7 bits (148), Expect = 1e-10
Identities = 32/103 (31%), Positives = 55/103 (53%), Gaps = 1/103 (0%)
Frame = +1
Query: 262 QNMRRPDWDSVSLQPFNKNFYDPHPTVLKRSPYEVEEYRNKHE-VTVSGVEVHNPIQYFE 438
+ ++ D +V QPF K+FY P + K +P E +E+R E + V G P++ +
Sbjct: 49 EELQPVDHKTVVYQPFRKDFYVEVPELAKMTPEETDEFRLSLENIHVRGKNAPKPVKTWA 108
Query: 439 EANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLXGVXQT 567
+ + +K Y++PTPIQAQ P+ MSG+++ + T
Sbjct: 109 QTGVQLKILDVLKKNSYEKPTPIQAQAIPVIMSGRDMIAIVMT 151
>SB_52320| Best HMM Match : DEAD (HMM E-Value=0)
Length = 340
Score = 59.3 bits (137), Expect = 3e-09
Identities = 31/84 (36%), Positives = 48/84 (57%)
Frame = +1
Query: 424 IQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLXGVXQTGSGKTLAYILPA 603
++ F + G+ G+ PT IQ QG P+A+SG+++ G +TGSGKTLA+++P
Sbjct: 49 VEKFSDFPISKRTLDGLMKAGFVTPTDIQKQGIPVALSGRDVLGAAKTGSGKTLAFLIPI 108
Query: 604 IVHINNQPPIRRGDGPIAXVLAPT 675
I + Q DG A V++PT
Sbjct: 109 IETLWRQKWTSM-DGLGALVISPT 131
>SB_5994| Best HMM Match : zf-CCHC (HMM E-Value=2.2e-19)
Length = 185
Score = 56.0 bits (129), Expect = 3e-08
Identities = 30/72 (41%), Positives = 42/72 (58%)
Frame = +1
Query: 367 EEYRNKHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKN 546
E+Y ++ EV VSG I FEEAN + V+ YK+PTP+Q PI ++G++
Sbjct: 115 EKY-DQIEVLVSGNNPVRHINSFEEANLYEAFLNNVRKAQYKKPTPVQKYSIPIVIAGRD 173
Query: 547 LXGVXQTGSGKT 582
+ QTGSGKT
Sbjct: 174 VMACAQTGSGKT 185
>SB_30826| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1375
Score = 54.8 bits (126), Expect = 6e-08
Identities = 25/69 (36%), Positives = 38/69 (55%)
Frame = +1
Query: 424 IQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLXGVXQTGSGKTLAYILPA 603
I FE+ + + + V GYK+PTP+Q PI ++L QTGSGKT A+++P
Sbjct: 874 ILQFEDVDLGEILLHNVGLAGYKKPTPVQKYAIPIVKGKRDLMACAQTGSGKTAAFLIPI 933
Query: 604 IVHINNQPP 630
+ I + P
Sbjct: 934 LSRIYMEGP 942
>SB_40196| Best HMM Match : DEAD (HMM E-Value=3.5e-07)
Length = 456
Score = 50.4 bits (115), Expect = 1e-06
Identities = 29/96 (30%), Positives = 44/96 (45%), Gaps = 3/96 (3%)
Frame = +1
Query: 388 EVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLXGVXQT 567
EV + G P + F +Y + +G PT +Q WP + G+++ GV
Sbjct: 178 EVLIQGESAPRPFLTMNNSTFYEYGPR----LGVTVPTSLQKHMWPSLLRGRDVAGVAIE 233
Query: 568 GSGKTLAYILPAIVHINNQPPIRR---GDGPIAXVL 666
GSGK LAY+LP I I + +GP+ +L
Sbjct: 234 GSGKRLAYLLPIIHQITESSVYQELPLANGPLVLIL 269
>SB_51015| Best HMM Match : DEAD (HMM E-Value=0.0057)
Length = 96
Score = 50.0 bits (114), Expect = 2e-06
Identities = 21/54 (38%), Positives = 34/54 (62%)
Frame = +1
Query: 466 QGVKTMGYKEPTPIQAQGWPIAMSGKNLXGVXQTGSGKTLAYILPAIVHINNQP 627
+ V +G+ PTPIQA P+A+ GK++ TG+GKT A++LP + + +P
Sbjct: 23 RAVNELGFLHPTPIQASTIPVALMGKDVCACAATGTGKTAAFMLPILERLLYRP 76
>SB_46680| Best HMM Match : Helicase_C (HMM E-Value=3.8e-22)
Length = 1058
Score = 50.0 bits (114), Expect = 2e-06
Identities = 23/69 (33%), Positives = 36/69 (52%), Gaps = 4/69 (5%)
Frame = +1
Query: 361 EVEEYRNKHEVTVSGVEVHNPIQYF----EEANFPDYVQQGVKTMGYKEPTPIQAQGWPI 528
++ +R++ + V G +V +P++ F E FPDY+ V+ GY PTPIQ Q P+
Sbjct: 137 KINLFRHEQHIYVKGADVPDPVETFSQLIERYGFPDYIIHNVQERGYTTPTPIQMQATPL 196
Query: 529 AMSGKNLXG 555
G G
Sbjct: 197 MAHGPKKSG 205
>SB_11691| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1448
Score = 50.0 bits (114), Expect = 2e-06
Identities = 27/71 (38%), Positives = 42/71 (59%), Gaps = 1/71 (1%)
Frame = +1
Query: 466 QGVKTMGYKEPTPIQAQGWPIAMSGKNLXGVXQTGSGKTLAYILPAIVHINN-QPPIRRG 642
QG+K MG+ T IQ + + G++L G +TGSGKTLA+++P + + Q R G
Sbjct: 585 QGIKDMGFTTMTEIQHKSIAPLLKGRDLLGAAKTGSGKTLAFLVPVVELLYKLQFKTRNG 644
Query: 643 DGPIAXVLAPT 675
G I +++PT
Sbjct: 645 TGVI--IISPT 653
>SB_17563| Best HMM Match : DEAD (HMM E-Value=0)
Length = 439
Score = 46.8 bits (106), Expect = 2e-05
Identities = 18/58 (31%), Positives = 36/58 (62%)
Frame = +1
Query: 433 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLXGVXQTGSGKTLAYILPAI 606
FE+ + G+ G+ +P+PIQ + P+A++G+++ + G+GKT AY++P +
Sbjct: 49 FEDYCLKRELLMGIFEKGFDKPSPIQEESIPVALAGRDILARAKNGTGKTAAYLVPLL 106
>SB_2247| Best HMM Match : DEAD (HMM E-Value=0)
Length = 439
Score = 46.8 bits (106), Expect = 2e-05
Identities = 18/58 (31%), Positives = 36/58 (62%)
Frame = +1
Query: 433 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLXGVXQTGSGKTLAYILPAI 606
FE+ + G+ G+ +P+PIQ + P+A++G+++ + G+GKT AY++P +
Sbjct: 49 FEDYCLKRELLMGIFEKGFDKPSPIQEESIPVALAGRDILARAKNGTGKTAAYLVPLL 106
>SB_57459| Best HMM Match : DEAD (HMM E-Value=1.50001e-40)
Length = 490
Score = 46.0 bits (104), Expect = 3e-05
Identities = 26/88 (29%), Positives = 47/88 (53%), Gaps = 5/88 (5%)
Frame = +1
Query: 382 KHEVTVSGVEVHNPI---QYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGK--N 546
KHEV V + +P+ + FEE +++GV MG+ +P+ IQ P+ ++ N
Sbjct: 85 KHEVEVLRSDPSSPLYSAKSFEELPLSANLRRGVYDMGFNKPSKIQETALPMLLADPPVN 144
Query: 547 LXGVXQTGSGKTLAYILPAIVHINNQPP 630
+ Q+G+GKT A++L + ++ P
Sbjct: 145 MIAQSQSGTGKTAAFVLTMLSRVDATKP 172
>SB_9558| Best HMM Match : DEAD (HMM E-Value=0)
Length = 436
Score = 45.6 bits (103), Expect = 4e-05
Identities = 26/65 (40%), Positives = 35/65 (53%)
Frame = +1
Query: 481 MGYKEPTPIQAQGWPIAMSGKNLXGVXQTGSGKTLAYILPAIVHINNQPPIRRGDGPIAX 660
MG K+PT IQ P + G++ G +TGSGKT A+ LP + + + P G A
Sbjct: 25 MGIKKPTEIQLNCVPPILQGRDCIGCAKTGSGKTAAFALPILQKLCDDP-----YGIFAV 79
Query: 661 VLAPT 675
VL PT
Sbjct: 80 VLTPT 84
>SB_18655| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 697
Score = 45.6 bits (103), Expect = 4e-05
Identities = 23/56 (41%), Positives = 36/56 (64%), Gaps = 1/56 (1%)
Frame = +1
Query: 451 PDYVQQGVKTMGYKEPTPIQAQGWPIAMS-GKNLXGVXQTGSGKTLAYILPAIVHI 615
PD + + + G+ +PTPIQ+ P A+ +++ G +TGSGKTLA+ +P I HI
Sbjct: 139 PD-ILRALGDQGFSKPTPIQSLSIPPALLYHRDIIGAAETGSGKTLAFGIPIIQHI 193
>SB_41683| Best HMM Match : DEAD (HMM E-Value=1.5e-27)
Length = 559
Score = 43.2 bits (97), Expect = 2e-04
Identities = 20/52 (38%), Positives = 33/52 (63%)
Frame = +1
Query: 451 PDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLXGVXQTGSGKTLAYILPAI 606
P V++ +K MG +P PIQ + P S K+L +TG+GK+L ++LP++
Sbjct: 169 PKLVEK-LKKMGITKPVPIQEKALPSVFSHKSLLIKSETGTGKSLVFLLPSV 219
>SB_37351| Best HMM Match : DEAD (HMM E-Value=0)
Length = 688
Score = 41.9 bits (94), Expect = 5e-04
Identities = 21/59 (35%), Positives = 35/59 (59%), Gaps = 1/59 (1%)
Frame = +1
Query: 502 PIQAQGWPIAMSGKNLXGVXQTGSGKTLAYILPAIVHI-NNQPPIRRGDGPIAXVLAPT 675
PIQA + G+++ G +TG+GKTL++ LP + + + + +RG P V+APT
Sbjct: 98 PIQASTFNYIYDGEDVIGQARTGTGKTLSFALPLVEKLQDGKLSQKRGRAPKVLVMAPT 156
>SB_32980| Best HMM Match : DEAD (HMM E-Value=0)
Length = 985
Score = 37.1 bits (82), Expect = 0.013
Identities = 14/50 (28%), Positives = 31/50 (62%)
Frame = +1
Query: 466 QGVKTMGYKEPTPIQAQGWPIAMSGKNLXGVXQTGSGKTLAYILPAIVHI 615
+G+ G+++P+PIQ + P+ G +L ++G+GKT + + A+ ++
Sbjct: 26 RGLNEAGFEKPSPIQLKAIPLGRCGLDLIAQAKSGTGKTCVFSVIALENV 75
>SB_34731| Best HMM Match : DEAD (HMM E-Value=3.8e-31)
Length = 978
Score = 36.7 bits (81), Expect = 0.017
Identities = 22/63 (34%), Positives = 32/63 (50%)
Frame = +1
Query: 454 DYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLXGVXQTGSGKTLAYILPAIVHINNQPPI 633
D V + + + +PT IQ P + ++ QTGSGKTLAY+ P +VH +
Sbjct: 387 DDVLKALDALNIHQPTVIQMVTIPKIIHRHHVICAAQTGSGKTLAYLAP-LVHRLREDEE 445
Query: 634 RRG 642
R G
Sbjct: 446 RHG 448
>SB_52411| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 370
Score = 35.1 bits (77), Expect = 0.052
Identities = 20/67 (29%), Positives = 38/67 (56%)
Frame = +1
Query: 475 KTMGYKEPTPIQAQGWPIAMSGKNLXGVXQTGSGKTLAYILPAIVHINNQPPIRRGDGPI 654
+T G+++P+ IQ + + G+++ Q+G+GKT + + + I+ Q +R P
Sbjct: 13 ETEGFEKPSAIQQRAIKPILKGRDVIAQAQSGTGKTATFSISVLQAIDTQ--LRE---PQ 67
Query: 655 AXVLAPT 675
A VL+PT
Sbjct: 68 ALVLSPT 74
>SB_5719| Best HMM Match : Helicase_C (HMM E-Value=1e-24)
Length = 1366
Score = 34.7 bits (76), Expect = 0.069
Identities = 30/119 (25%), Positives = 51/119 (42%), Gaps = 1/119 (0%)
Frame = +1
Query: 313 KNFYDPHPTVLKRSPYEVEEY-RNKHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGY 489
K D + LK E +E+ +N TV+ + P+ E P V + + +G+
Sbjct: 467 KELPDENDENLKEFAPEDDEFLKNLSLDTVAQMAAGIPV----ETETPPEVYKALGQLGF 522
Query: 490 KEPTPIQAQGWPIAMSGKNLXGVXQTGSGKTLAYILPAIVHINNQPPIRRGDGPIAXVL 666
Q Q +SG + V TG+GK+L Y LPA ++ P + P+ ++
Sbjct: 523 SSFRAGQEQAVMRILSGMSSLVVLSTGAGKSLCYQLPAYMYHKRSPCLTLVISPLVSLM 581
>SB_38262| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1039
Score = 34.7 bits (76), Expect = 0.069
Identities = 12/26 (46%), Positives = 20/26 (76%)
Frame = +1
Query: 523 PIAMSGKNLXGVXQTGSGKTLAYILP 600
P+ M GK++ + +TGSGKT A+++P
Sbjct: 313 PLVMDGKDVVAMARTGSGKTAAFLIP 338
>SB_51441| Best HMM Match : DEAD (HMM E-Value=4.9e-19)
Length = 304
Score = 31.9 bits (69), Expect = 0.49
Identities = 14/42 (33%), Positives = 25/42 (59%)
Frame = +1
Query: 484 GYKEPTPIQAQGWPIAMSGKNLXGVXQTGSGKTLAYILPAIV 609
GY + P+Q Q ++ K+ + TG+GKT+ Y +PA++
Sbjct: 136 GYIDFRPMQRQAIDTLLAEKDSLILLPTGAGKTICYAIPALL 177
>SB_49218| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 480
Score = 30.7 bits (66), Expect = 1.1
Identities = 11/38 (28%), Positives = 17/38 (44%)
Frame = +1
Query: 409 EVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGW 522
++H P++ + FP Y + Y P P QA W
Sbjct: 6 DIHGPVRKLHKHGFPGYEEDYAAVFKYPTPWPEQAMEW 43
>SB_52637| Best HMM Match : Cpn60_TCP1 (HMM E-Value=0)
Length = 505
Score = 30.3 bits (65), Expect = 1.5
Identities = 14/44 (31%), Positives = 26/44 (59%)
Frame = +1
Query: 355 PYEVEEYRNKHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMG 486
P+E + + KH++ V+ VE + +Q +E F + ++Q VK G
Sbjct: 252 PFEPPKPKTKHKLDVATVEDYKKLQEYEREKFTEMIKQ-VKDTG 294
>SB_3046| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 734
Score = 29.9 bits (64), Expect = 2.0
Identities = 30/129 (23%), Positives = 52/129 (40%), Gaps = 5/129 (3%)
Frame = -1
Query: 499 SVLCNPLSLHLVAHNQENLLLQSIE*DYEPQRHLQLPRVYFYTLRLHMVIF*E-----L* 335
++ C L ++ +N LLL + Y Q L +VY T H ++ L
Sbjct: 397 AIACCLLQVYHNTYNSHRLLLIAGVSQYLQQPSLAAMQVYHNTYNSHRLLLIAGVSQYLQ 456
Query: 334 DVDHKSFC*KVGVKQNPNLGVACSALQRILFSHQSLQILQIYCHRCQTETNYRRICCLLQ 155
++C + + L A + + H L YC RC T CCLLQ
Sbjct: 457 QPSLAAYCRCITI-----LTTAIACCYASVSQHLQQPSLAAYC-RCITILTTAIACCLLQ 510
Query: 154 IWNHRFHGY 128
++++ ++G+
Sbjct: 511 VYHNTYNGH 519
>SB_44408| Best HMM Match : DEAD (HMM E-Value=6.8005e-42)
Length = 238
Score = 29.5 bits (63), Expect = 2.6
Identities = 12/29 (41%), Positives = 20/29 (68%)
Frame = +1
Query: 541 KNLXGVXQTGSGKTLAYILPAIVHINNQP 627
K++ G+ +TGSGKT A+ LP + + + P
Sbjct: 2 KDVIGLAETGSGKTGAFALPILQALLDNP 30
>SB_6554| Best HMM Match : Isy1 (HMM E-Value=0)
Length = 675
Score = 29.1 bits (62), Expect = 3.4
Identities = 13/32 (40%), Positives = 20/32 (62%), Gaps = 1/32 (3%)
Frame = +1
Query: 367 EEYRNK-HEVTVSGVEVHNPIQYFEEANFPDY 459
EE NK H++ + + +HNP YFE+ + DY
Sbjct: 234 EEVNNKLHKILIVNM-IHNPFNYFEKKSPTDY 264
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,927,772
Number of Sequences: 59808
Number of extensions: 419507
Number of successful extensions: 1109
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 1036
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1106
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1733301648
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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