Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P01_F_L06
(676 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81555-7|CAB04518.1| 561|Caenorhabditis elegans Hypothetical pr... 119 2e-27
Z81449-4|CAB03765.1| 811|Caenorhabditis elegans Hypothetical pr... 116 2e-26
AF045641-1|AAK68386.1| 970|Caenorhabditis elegans Hypothetical ... 107 9e-24
U13070-1|AAK67224.1| 730|Caenorhabditis elegans Hypothetical pr... 98 4e-21
AL034488-3|CAA22456.1| 504|Caenorhabditis elegans Hypothetical ... 76 3e-14
AC006665-5|AAF39907.1| 630|Caenorhabditis elegans Hypothetical ... 73 1e-13
AC024810-3|AAU20831.1| 660|Caenorhabditis elegans Vasa- and bel... 71 8e-13
AC024810-2|AAK68520.1| 644|Caenorhabditis elegans Vasa- and bel... 71 8e-13
AC024810-1|AAF60764.1| 641|Caenorhabditis elegans Vasa- and bel... 71 8e-13
AC024859-14|AAY43989.1| 643|Caenorhabditis elegans Hypothetical... 66 2e-11
U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase pr... 58 6e-09
L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase pr... 58 6e-09
AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line hel... 58 6e-09
AF079509-1|AAC28388.1| 720|Caenorhabditis elegans germline RNA ... 56 2e-08
AF003145-4|AAB57719.1| 720|Caenorhabditis elegans Germ-line hel... 56 2e-08
U60449-1|AAB03510.1| 974|Caenorhabditis elegans GLH-2 protein. 54 7e-08
U60194-1|AAB03337.1| 974|Caenorhabditis elegans RNA helicase GL... 54 7e-08
AC025726-23|AAK73934.1| 763|Caenorhabditis elegans Hypothetical... 54 7e-08
AC006625-11|AAK68269.1| 974|Caenorhabditis elegans Germ-line he... 54 7e-08
AC024876-4|AAU05555.1| 825|Caenorhabditis elegans Hypothetical ... 50 2e-06
AC024876-3|AAU05556.1| 871|Caenorhabditis elegans Hypothetical ... 50 2e-06
U80447-1|AAB37806.1| 746|Caenorhabditis elegans Hypothetical pr... 49 3e-06
AC006661-5|AAF39890.2| 488|Caenorhabditis elegans Hypothetical ... 49 3e-06
AC006661-4|ABB88208.1| 561|Caenorhabditis elegans Hypothetical ... 49 3e-06
Z75546-3|CAA99891.1| 581|Caenorhabditis elegans Hypothetical pr... 48 6e-06
AF025451-3|AAB71200.2| 634|Caenorhabditis elegans Hypothetical ... 47 1e-05
Z29115-1|CAA82362.1| 489|Caenorhabditis elegans Hypothetical pr... 45 6e-05
AF079508-1|AAC28387.1| 1156|Caenorhabditis elegans germline RNA ... 44 1e-04
AF039718-2|AAB96745.2| 1156|Caenorhabditis elegans Germ-line hel... 44 1e-04
AC024753-1|AAF60456.1| 732|Caenorhabditis elegans Hypothetical ... 44 1e-04
AF067608-1|AAC17654.2| 544|Caenorhabditis elegans Hypothetical ... 43 2e-04
Z81094-7|CAB03153.2| 960|Caenorhabditis elegans Hypothetical pr... 42 3e-04
AC006605-1|AAK85443.1| 430|Caenorhabditis elegans Conserved ger... 42 5e-04
Z12116-1|CAA78102.1| 402|Caenorhabditis elegans protein ( C.ele... 39 0.003
U80447-2|AAO38637.1| 579|Caenorhabditis elegans Hypothetical pr... 39 0.003
U13876-3|AAA21170.1| 402|Caenorhabditis elegans Initiation fact... 39 0.003
EU051652-1|ABS85191.1| 973|Caenorhabditis elegans MEL-46 protein. 38 0.005
CU457744-1|CAM36366.2| 973|Caenorhabditis elegans Hypothetical ... 38 0.005
AF039720-12|AAB96704.1| 399|Caenorhabditis elegans Hypothetical... 38 0.005
Z50071-3|CAA90407.1| 613|Caenorhabditis elegans Hypothetical pr... 38 0.009
Z50071-2|CAA90406.1| 638|Caenorhabditis elegans Hypothetical pr... 38 0.009
Z50071-1|CAA90408.1| 1022|Caenorhabditis elegans Hypothetical pr... 38 0.009
AC024844-2|AAK29954.2| 399|Caenorhabditis elegans Hypothetical ... 37 0.015
AC024830-10|AAF59610.3| 728|Caenorhabditis elegans Hypothetical... 37 0.015
Z22177-1|CAA80151.1| 578|Caenorhabditis elegans Hypothetical pr... 31 0.75
L17337-1|AAP68928.1| 593|Caenorhabditis elegans Hypothetical pr... 31 0.99
Z79752-5|CAB02082.3| 1119|Caenorhabditis elegans Hypothetical pr... 30 1.7
U13876-12|AAA21169.1| 363|Caenorhabditis elegans Hypothetical p... 30 1.7
Z99710-10|CAN99659.1| 222|Caenorhabditis elegans Hypothetical p... 29 2.3
Z68220-9|CAL64002.1| 312|Caenorhabditis elegans Hypothetical pr... 29 3.0
Z68220-8|CAA92487.1| 221|Caenorhabditis elegans Hypothetical pr... 29 3.0
Z38112-4|CAA86232.1| 809|Caenorhabditis elegans Hypothetical pr... 29 3.0
AC006714-20|AAK29723.2| 281|Caenorhabditis elegans Serpentine r... 29 3.0
AC006714-16|AAK29721.3| 281|Caenorhabditis elegans Serpentine r... 29 3.0
U00052-13|AAW88393.1| 608|Caenorhabditis elegans Hypothetical p... 29 4.0
U00052-12|AAK21428.2| 631|Caenorhabditis elegans Hypothetical p... 29 4.0
AL110485-3|CAB60351.1| 2145|Caenorhabditis elegans Hypothetical ... 28 5.3
Z81103-2|CAB03213.1| 403|Caenorhabditis elegans Hypothetical pr... 28 7.0
Z81103-1|CAB03208.2| 457|Caenorhabditis elegans Hypothetical pr... 28 7.0
AC091124-2|AAK27879.2| 1114|Caenorhabditis elegans Hypothetical ... 28 7.0
U64840-7|AAB04965.1| 340|Caenorhabditis elegans Hypothetical pr... 27 9.2
U53141-4|AAA96106.1| 528|Caenorhabditis elegans Mutator protein... 27 9.2
>Z81555-7|CAB04518.1| 561|Caenorhabditis elegans Hypothetical
protein F58E10.3a protein.
Length = 561
Score = 119 bits (287), Expect = 2e-27
Identities = 55/136 (40%), Positives = 87/136 (63%)
Frame = +1
Query: 268 MRRPDWDSVSLQPFNKNFYDPHPTVLKRSPYEVEEYRNKHEVTVSGVEVHNPIQYFEEAN 447
+R DW + +L P K+FY + V +R YE++++ + ++VT+ G V P+ F EA
Sbjct: 77 LRDVDWSAENLTPIEKDFYHENAAVSRREQYEIDQWVSANQVTLEGRGVPRPVFEFNEAP 136
Query: 448 FPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLXGVXQTGSGKTLAYILPAIVHINNQP 627
P + + + +++PT IQ+ WPIAMSG+++ + +TGSGKTLA++LPA+VHI Q
Sbjct: 137 LPGQIHELLYGK-FQKPTVIQSISWPIAMSGRDIISIAKTGSGKTLAFMLPALVHITKQA 195
Query: 628 PIRRGDGPIAXVLAPT 675
+RG+GP VL PT
Sbjct: 196 HRQRGEGPAVLVLLPT 211
>Z81449-4|CAB03765.1| 811|Caenorhabditis elegans Hypothetical
protein C46F11.4 protein.
Length = 811
Score = 116 bits (279), Expect = 2e-26
Identities = 50/132 (37%), Positives = 81/132 (61%)
Frame = +1
Query: 280 DWDSVSLQPFNKNFYDPHPTVLKRSPYEVEEYRNKHEVTVSGVEVHNPIQYFEEANFPDY 459
D + Q FNKNFY+ H + + +V +N + V G++ P+ F +F
Sbjct: 216 DHSQIQYQKFNKNFYEEHEDIKRLHYMDVIRLQNTMNLRVGGLKPPRPVCSFAHFSFDKL 275
Query: 460 VQQGVKTMGYKEPTPIQAQGWPIAMSGKNLXGVXQTGSGKTLAYILPAIVHINNQPPIRR 639
+ + ++ Y++PTPIQA P A+SG+++ G+ +TGSGKT AY+ PAIVHI +QP ++
Sbjct: 276 LMEAIRKSEYEQPTPIQAMAIPSALSGRDVLGIAKTGSGKTAAYLWPAIVHIMDQPDLKA 335
Query: 640 GDGPIAXVLAPT 675
G+GP+A ++ PT
Sbjct: 336 GEGPVAVIVVPT 347
>AF045641-1|AAK68386.1| 970|Caenorhabditis elegans Hypothetical
protein F53H1.1 protein.
Length = 970
Score = 107 bits (256), Expect = 9e-24
Identities = 53/137 (38%), Positives = 81/137 (59%), Gaps = 1/137 (0%)
Frame = +1
Query: 268 MRRPDWDSVSLQPFNKNFYDPHPTVLKRSPYEVEEYRNKHE-VTVSGVEVHNPIQYFEEA 444
+ + D V + F KNFY + + + EV+ YR + + +TV G++ PI+ + +
Sbjct: 250 LAQTDHSKVYYRKFKKNFYIETEEIRRMTKAEVKAYREELDSITVKGIDCPKPIKTWAQC 309
Query: 445 NFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLXGVXQTGSGKTLAYILPAIVHINNQ 624
+ +K Y +PT IQAQ P MSG+++ G+ +TGSGKTLA++LP HI +Q
Sbjct: 310 GVNLKMMNVLKKFEYSKPTSIQAQAIPSIMSGRDVIGIAKTGSGKTLAFLLPMFRHILDQ 369
Query: 625 PPIRRGDGPIAXVLAPT 675
P + GDGPIA +LAPT
Sbjct: 370 PELEEGDGPIAVILAPT 386
>U13070-1|AAK67224.1| 730|Caenorhabditis elegans Hypothetical
protein F01F1.7 protein.
Length = 730
Score = 98.3 bits (234), Expect = 4e-21
Identities = 46/105 (43%), Positives = 67/105 (63%), Gaps = 4/105 (3%)
Frame = +1
Query: 373 YRNKHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLX 552
+R +++ G V P++ +EEA FPD V Q VK +GY EPTPIQ Q PI + +++
Sbjct: 283 FREDFNISIKGGRVPRPLRNWEEAGFPDEVYQAVKEIGYLEPTPIQRQAIPIGLQNRDVI 342
Query: 553 GVXQTGSGKTLAYILPAIVHINNQPPIRRGD----GPIAXVLAPT 675
GV +TGSGKT A++LP +V I + P + R + GP A ++APT
Sbjct: 343 GVAETGSGKTAAFLLPLLVWITSLPKMERQEHRDLGPYAIIMAPT 387
>AL034488-3|CAA22456.1| 504|Caenorhabditis elegans Hypothetical
protein Y54G11A.3 protein.
Length = 504
Score = 75.8 bits (178), Expect = 3e-14
Identities = 40/99 (40%), Positives = 63/99 (63%), Gaps = 7/99 (7%)
Frame = +1
Query: 400 SGVEVHNPIQYFEEANFPDYVQQG-VKTMGYKEPTPIQAQGWPIAMSGKNLXGVXQTGSG 576
S V++ P+ FE+A + G ++ G+++P+PIQ+Q WP+ +SG++ GV QTGSG
Sbjct: 74 STVKIPPPVNSFEQAFGSNASIMGEIRKNGFEKPSPIQSQMWPLLLSGQDCIGVSQTGSG 133
Query: 577 KTLAYILPAIVHINNQ-PPIRRGD-----GPIAXVLAPT 675
KTLA++LPA++HI+ Q + D P VL+PT
Sbjct: 134 KTLAFLLPALLHIDAQLAQYEKNDEEQKPSPFVLVLSPT 172
>AC006665-5|AAF39907.1| 630|Caenorhabditis elegans Hypothetical
protein H27M09.1 protein.
Length = 630
Score = 73.3 bits (172), Expect = 1e-13
Identities = 38/120 (31%), Positives = 64/120 (53%), Gaps = 4/120 (3%)
Frame = +1
Query: 328 PHPTVLKRSPYEVEEYRNKHEVTVSGVEVHNPIQYFEEANFPDYVQQGV-KTMGYKEPTP 504
P + ++S + E R + ++ G + PI F E FP + + + K G PT
Sbjct: 156 PPGHIRRQSQEDYEIQRKRLGISCEGDHIPPPIGSFLEMKFPKSLLEFMQKQKGIVTPTA 215
Query: 505 IQAQGWPIAMSGKNLXGVXQTGSGKTLAYILPAIVHINNQP---PIRRGDGPIAXVLAPT 675
IQ QG P+A+SG+++ G+ TGSGKT+ ++LP ++ Q P R +GP ++ P+
Sbjct: 216 IQIQGIPVALSGRDMIGIASTGSGKTMTFVLPLVMFCLEQEMKLPFMRSEGPFGLIIVPS 275
>AC024810-3|AAU20831.1| 660|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform c protein.
Length = 660
Score = 70.9 bits (166), Expect = 8e-13
Identities = 45/113 (39%), Positives = 60/113 (53%), Gaps = 10/113 (8%)
Frame = +1
Query: 367 EEYRNKHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKN 546
++Y N V VSG V I++F EA F V + V GY +PTP+Q P ++ ++
Sbjct: 120 DKYENI-PVEVSGDSVPAAIEHFNEAGFGPAVMENVNRSGYSKPTPVQKHSIPTLLANRD 178
Query: 547 LXGVXQTGSGKTLAYILPAIVHI------NNQPPI----RRGDGPIAXVLAPT 675
L QTGSGKT A++LP I HI +PP RR P A VL+PT
Sbjct: 179 LMSCAQTGSGKTAAFLLPIIQHILAGGPDMVKPPAFTNGRRTYYPCALVLSPT 231
>AC024810-2|AAK68520.1| 644|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform b protein.
Length = 644
Score = 70.9 bits (166), Expect = 8e-13
Identities = 45/113 (39%), Positives = 60/113 (53%), Gaps = 10/113 (8%)
Frame = +1
Query: 367 EEYRNKHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKN 546
++Y N V VSG V I++F EA F V + V GY +PTP+Q P ++ ++
Sbjct: 104 DKYENI-PVEVSGDSVPAAIEHFNEAGFGPAVMENVNRSGYSKPTPVQKHSIPTLLANRD 162
Query: 547 LXGVXQTGSGKTLAYILPAIVHI------NNQPPI----RRGDGPIAXVLAPT 675
L QTGSGKT A++LP I HI +PP RR P A VL+PT
Sbjct: 163 LMSCAQTGSGKTAAFLLPIIQHILAGGPDMVKPPAFTNGRRTYYPCALVLSPT 215
>AC024810-1|AAF60764.1| 641|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform a protein.
Length = 641
Score = 70.9 bits (166), Expect = 8e-13
Identities = 45/113 (39%), Positives = 60/113 (53%), Gaps = 10/113 (8%)
Frame = +1
Query: 367 EEYRNKHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKN 546
++Y N V VSG V I++F EA F V + V GY +PTP+Q P ++ ++
Sbjct: 101 DKYENI-PVEVSGDSVPAAIEHFNEAGFGPAVMENVNRSGYSKPTPVQKHSIPTLLANRD 159
Query: 547 LXGVXQTGSGKTLAYILPAIVHI------NNQPPI----RRGDGPIAXVLAPT 675
L QTGSGKT A++LP I HI +PP RR P A VL+PT
Sbjct: 160 LMSCAQTGSGKTAAFLLPIIQHILAGGPDMVKPPAFTNGRRTYYPCALVLSPT 212
>AC024859-14|AAY43989.1| 643|Caenorhabditis elegans Hypothetical
protein Y71H2AM.19 protein.
Length = 643
Score = 66.1 bits (154), Expect = 2e-11
Identities = 28/80 (35%), Positives = 45/80 (56%)
Frame = +1
Query: 391 VTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLXGVXQTG 570
V +G +V PI F + + +++++ +KT GY PTP+Q P G++L QTG
Sbjct: 154 VEATGDDVPQPISLFSDLSLHEWIEENIKTAGYDRPTPVQKYSIPALQGGRDLMSCAQTG 213
Query: 571 SGKTLAYILPAIVHINNQPP 630
SGKT A+++P + I P
Sbjct: 214 SGKTAAFLVPLVNAILQDGP 233
>U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase
protein.
Length = 763
Score = 58.0 bits (134), Expect = 6e-09
Identities = 31/89 (34%), Positives = 47/89 (52%), Gaps = 4/89 (4%)
Frame = +1
Query: 421 PIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLXGVXQTGSGKTLAYILP 600
P + F EAN + +Q+ V GY + TPIQ P+ G ++ QTGSGKT A++LP
Sbjct: 339 PCKTFAEANLTETMQKNVAHAGYSKTTPIQQYALPLVHQGYDIMACAQTGSGKTAAFLLP 398
Query: 601 AIVHINNQPPIR-RGDG---PIAXVLAPT 675
+ + + + G+G P +L PT
Sbjct: 399 IMTRLIDDNNLNTAGEGGCYPRCIILTPT 427
>L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase
protein.
Length = 763
Score = 58.0 bits (134), Expect = 6e-09
Identities = 31/89 (34%), Positives = 47/89 (52%), Gaps = 4/89 (4%)
Frame = +1
Query: 421 PIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLXGVXQTGSGKTLAYILP 600
P + F EAN + +Q+ V GY + TPIQ P+ G ++ QTGSGKT A++LP
Sbjct: 339 PCKTFAEANLTETMQKNVAHAGYSKTTPIQQYALPLVHQGYDIMACAQTGSGKTAAFLLP 398
Query: 601 AIVHINNQPPIR-RGDG---PIAXVLAPT 675
+ + + + G+G P +L PT
Sbjct: 399 IMTRLIDDNNLNTAGEGGCYPRCIILTPT 427
>AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line
helicase protein 1 protein.
Length = 763
Score = 58.0 bits (134), Expect = 6e-09
Identities = 31/89 (34%), Positives = 47/89 (52%), Gaps = 4/89 (4%)
Frame = +1
Query: 421 PIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLXGVXQTGSGKTLAYILP 600
P + F EAN + +Q+ V GY + TPIQ P+ G ++ QTGSGKT A++LP
Sbjct: 339 PCKTFAEANLTETMQKNVAHAGYSKTTPIQQYALPLVHQGYDIMACAQTGSGKTAAFLLP 398
Query: 601 AIVHINNQPPIR-RGDG---PIAXVLAPT 675
+ + + + G+G P +L PT
Sbjct: 399 IMTRLIDDNNLNTAGEGGCYPRCIILTPT 427
>AF079509-1|AAC28388.1| 720|Caenorhabditis elegans germline RNA
helicase-3 protein.
Length = 720
Score = 56.4 bits (130), Expect = 2e-08
Identities = 29/89 (32%), Positives = 48/89 (53%), Gaps = 4/89 (4%)
Frame = +1
Query: 421 PIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLXGVXQTGSGKTLAYILP 600
P + F +++ P +++ V+ GY TPIQ P+ GK++ QTGSGKT A++LP
Sbjct: 296 PCKSFSDSDIPQSMRRNVERAGYTRTTPIQQYTLPLVADGKDILACAQTGSGKTAAFLLP 355
Query: 601 AIVHINNQPPIRRG-DG---PIAXVLAPT 675
+ + + + G +G P +L PT
Sbjct: 356 IMSRLILEKDLNYGAEGGCYPRCIILTPT 384
>AF003145-4|AAB57719.1| 720|Caenorhabditis elegans Germ-line
helicase protein 3 protein.
Length = 720
Score = 56.4 bits (130), Expect = 2e-08
Identities = 29/89 (32%), Positives = 48/89 (53%), Gaps = 4/89 (4%)
Frame = +1
Query: 421 PIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLXGVXQTGSGKTLAYILP 600
P + F +++ P +++ V+ GY TPIQ P+ GK++ QTGSGKT A++LP
Sbjct: 296 PCKSFSDSDIPQSMRRNVERAGYTRTTPIQQYTLPLVADGKDILACAQTGSGKTAAFLLP 355
Query: 601 AIVHINNQPPIRRG-DG---PIAXVLAPT 675
+ + + + G +G P +L PT
Sbjct: 356 IMSRLILEKDLNYGAEGGCYPRCIILTPT 384
>U60449-1|AAB03510.1| 974|Caenorhabditis elegans GLH-2 protein.
Length = 974
Score = 54.4 bits (125), Expect = 7e-08
Identities = 29/85 (34%), Positives = 46/85 (54%), Gaps = 4/85 (4%)
Frame = +1
Query: 433 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLXGVXQTGSGKTLAYILPAIVH 612
F EAN + +++ V GY + TPIQ P+ G ++ QTGSGKT A++LP +
Sbjct: 554 FSEANLGETMKKNVAHAGYTKTTPIQQYTLPLIHQGHDIMACAQTGSGKTAAFLLPIMAR 613
Query: 613 INNQPPIR-RGDG---PIAXVLAPT 675
+ ++ + G+G P +L PT
Sbjct: 614 LIDENDLNTAGEGGCYPRCIILTPT 638
>U60194-1|AAB03337.1| 974|Caenorhabditis elegans RNA helicase GLH-2
protein.
Length = 974
Score = 54.4 bits (125), Expect = 7e-08
Identities = 29/85 (34%), Positives = 46/85 (54%), Gaps = 4/85 (4%)
Frame = +1
Query: 433 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLXGVXQTGSGKTLAYILPAIVH 612
F EAN + +++ V GY + TPIQ P+ G ++ QTGSGKT A++LP +
Sbjct: 554 FSEANLGETMKKNVAHAGYTKTTPIQQYTLPLIHQGHDIMACAQTGSGKTAAFLLPIMAR 613
Query: 613 INNQPPIR-RGDG---PIAXVLAPT 675
+ ++ + G+G P +L PT
Sbjct: 614 LIDENDLNTAGEGGCYPRCIILTPT 638
>AC025726-23|AAK73934.1| 763|Caenorhabditis elegans Hypothetical
protein Y71G12B.8 protein.
Length = 763
Score = 54.4 bits (125), Expect = 7e-08
Identities = 23/65 (35%), Positives = 38/65 (58%)
Frame = +1
Query: 433 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLXGVXQTGSGKTLAYILPAIVH 612
FE+ N + + GY +PTPIQ P+A++GK++ TG+GKT A++LP +
Sbjct: 150 FEQMNLSRQILKACSGAGYSDPTPIQQACIPVALTGKDICACAATGTGKTAAFVLPILER 209
Query: 613 INNQP 627
+ +P
Sbjct: 210 MIYRP 214
>AC006625-11|AAK68269.1| 974|Caenorhabditis elegans Germ-line
helicase protein 2 protein.
Length = 974
Score = 54.4 bits (125), Expect = 7e-08
Identities = 29/85 (34%), Positives = 46/85 (54%), Gaps = 4/85 (4%)
Frame = +1
Query: 433 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLXGVXQTGSGKTLAYILPAIVH 612
F EAN + +++ V GY + TPIQ P+ G ++ QTGSGKT A++LP +
Sbjct: 554 FSEANLGETMKKNVAHAGYTKTTPIQQYTLPLIHQGHDIMACAQTGSGKTAAFLLPIMAR 613
Query: 613 INNQPPIR-RGDG---PIAXVLAPT 675
+ ++ + G+G P +L PT
Sbjct: 614 LIDENDLNTAGEGGCYPRCIILTPT 638
>AC024876-4|AAU05555.1| 825|Caenorhabditis elegans Hypothetical
protein Y94H6A.5a protein.
Length = 825
Score = 50.0 bits (114), Expect = 2e-06
Identities = 20/64 (31%), Positives = 37/64 (57%)
Frame = +1
Query: 415 HNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLXGVXQTGSGKTLAYI 594
H +++ V + ++ G+ +PTPIQ + P M GK++ + +TGSGKT A++
Sbjct: 20 HKKAGGWQQIGLDHSVYKAIEKKGFNQPTPIQRKTIPCIMDGKDVVAMSRTGSGKTAAFV 79
Query: 595 LPAI 606
+P +
Sbjct: 80 IPML 83
>AC024876-3|AAU05556.1| 871|Caenorhabditis elegans Hypothetical
protein Y94H6A.5b protein.
Length = 871
Score = 50.0 bits (114), Expect = 2e-06
Identities = 20/64 (31%), Positives = 37/64 (57%)
Frame = +1
Query: 415 HNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLXGVXQTGSGKTLAYI 594
H +++ V + ++ G+ +PTPIQ + P M GK++ + +TGSGKT A++
Sbjct: 20 HKKAGGWQQIGLDHSVYKAIEKKGFNQPTPIQRKTIPCIMDGKDVVAMSRTGSGKTAAFV 79
Query: 595 LPAI 606
+P +
Sbjct: 80 IPML 83
>U80447-1|AAB37806.1| 746|Caenorhabditis elegans Hypothetical
protein F55F8.2a protein.
Length = 746
Score = 48.8 bits (111), Expect = 3e-06
Identities = 27/82 (32%), Positives = 46/82 (56%), Gaps = 7/82 (8%)
Frame = +1
Query: 451 PDYVQQGVKTMGYKEPTPIQAQGWPIAMSGK-NLXGVXQTGSGKTLAYILPAIVHI---- 615
P+ V + ++ MG+ EPT IQ+ P A+ + ++ G +TGSGKTLA+ +P + +
Sbjct: 163 PNEVLEAIEQMGFSEPTEIQSAVLPAAVRDRQDVLGAAETGSGKTLAFGIPLVARLLESS 222
Query: 616 --NNQPPIRRGDGPIAXVLAPT 675
+ + GP A ++APT
Sbjct: 223 DDSQETESTEVRGPRALIVAPT 244
>AC006661-5|AAF39890.2| 488|Caenorhabditis elegans Hypothetical
protein H20J04.4a protein.
Length = 488
Score = 48.8 bits (111), Expect = 3e-06
Identities = 26/81 (32%), Positives = 43/81 (53%)
Frame = +1
Query: 433 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLXGVXQTGSGKTLAYILPAIVH 612
F + ++ Q ++TM K TP+QA P + G ++ G +TG+GKTLA+ +P +
Sbjct: 91 FSQLGVCSWITQQLQTMQIKTATPVQAACIPKILEGSDILGCARTGTGKTLAFAIPILQK 150
Query: 613 INNQPPIRRGDGPIAXVLAPT 675
++ P G A +L PT
Sbjct: 151 LSVDP-----YGIYALILTPT 166
>AC006661-4|ABB88208.1| 561|Caenorhabditis elegans Hypothetical
protein H20J04.4b protein.
Length = 561
Score = 48.8 bits (111), Expect = 3e-06
Identities = 26/81 (32%), Positives = 43/81 (53%)
Frame = +1
Query: 433 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLXGVXQTGSGKTLAYILPAIVH 612
F + ++ Q ++TM K TP+QA P + G ++ G +TG+GKTLA+ +P +
Sbjct: 91 FSQLGVCSWITQQLQTMQIKTATPVQAACIPKILEGSDILGCARTGTGKTLAFAIPILQK 150
Query: 613 INNQPPIRRGDGPIAXVLAPT 675
++ P G A +L PT
Sbjct: 151 LSVDP-----YGIYALILTPT 166
>Z75546-3|CAA99891.1| 581|Caenorhabditis elegans Hypothetical
protein R05D11.4 protein.
Length = 581
Score = 48.0 bits (109), Expect = 6e-06
Identities = 27/92 (29%), Positives = 44/92 (47%)
Frame = +1
Query: 340 VLKRSPYEVEEYRNKHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQG 519
V KR +++ R + + G + N I F +++ + + ++P+PIQ Q
Sbjct: 97 VEKRMQKLLDDIRRTNRIFTWGDHLPNIILRFSDSSMSPSLLNRLSENSIRQPSPIQMQS 156
Query: 520 WPIAMSGKNLXGVXQTGSGKTLAYILPAIVHI 615
P +N+ TGSGKTLA+ LP I I
Sbjct: 157 IPFMTERRNVLASAPTGSGKTLAFALPVIDEI 188
>AF025451-3|AAB71200.2| 634|Caenorhabditis elegans Hypothetical
protein C24H12.4a protein.
Length = 634
Score = 47.2 bits (107), Expect = 1e-05
Identities = 22/82 (26%), Positives = 44/82 (53%), Gaps = 1/82 (1%)
Frame = +1
Query: 433 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLXGVXQTGSGKTLAYILPAIVH 612
F + + + + + +G+++ +Q +A+ KN+ G +TGSGKT A+++P +
Sbjct: 91 FADFGLDERILKSIGELGWEKANQVQESVISLALENKNIMGRARTGSGKTGAFLIPLVQK 150
Query: 613 INNQPPIRRGD-GPIAXVLAPT 675
+ + G GP A ++APT
Sbjct: 151 LIAESKTNDGSVGPSAVIIAPT 172
>Z29115-1|CAA82362.1| 489|Caenorhabditis elegans Hypothetical
protein T26G10.1 protein.
Length = 489
Score = 44.8 bits (101), Expect = 6e-05
Identities = 20/65 (30%), Positives = 36/65 (55%)
Frame = +1
Query: 433 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLXGVXQTGSGKTLAYILPAIVH 612
F E + + +G+ +P+ IQ P A+ GK++ G+ +TGSGKT A+ +P +
Sbjct: 46 FAELGVSQPLCDACQRLGWMKPSKIQQAALPHALQGKDVIGLAETGSGKTGAFAIPVLQS 105
Query: 613 INNQP 627
+ + P
Sbjct: 106 LLDHP 110
>AF079508-1|AAC28387.1| 1156|Caenorhabditis elegans germline RNA
helicase-4 protein.
Length = 1156
Score = 44.0 bits (99), Expect = 1e-04
Identities = 22/82 (26%), Positives = 39/82 (47%)
Frame = +1
Query: 370 EYRNKHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNL 549
++ K + VE+ + + P + +K M PTPIQ + M G ++
Sbjct: 717 DFDQKVVASTGKVEIPDMASFDGFKILPQDLHDNLKRMKMNRPTPIQRASFFPIMHGNDV 776
Query: 550 XGVXQTGSGKTLAYILPAIVHI 615
TGSGKTLA+++P ++ +
Sbjct: 777 VACAHTGSGKTLAFLIPFVIKL 798
>AF039718-2|AAB96745.2| 1156|Caenorhabditis elegans Germ-line
helicase protein 4 protein.
Length = 1156
Score = 44.0 bits (99), Expect = 1e-04
Identities = 22/82 (26%), Positives = 39/82 (47%)
Frame = +1
Query: 370 EYRNKHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNL 549
++ K + VE+ + + P + +K M PTPIQ + M G ++
Sbjct: 717 DFDQKVVASTGKVEIPDMASFDGFKILPQDLHDNLKRMKMNRPTPIQRASFFPIMHGNDV 776
Query: 550 XGVXQTGSGKTLAYILPAIVHI 615
TGSGKTLA+++P ++ +
Sbjct: 777 VACAHTGSGKTLAFLIPFVIKL 798
>AC024753-1|AAF60456.1| 732|Caenorhabditis elegans Hypothetical
protein Y23H5B.6 protein.
Length = 732
Score = 43.6 bits (98), Expect = 1e-04
Identities = 18/47 (38%), Positives = 30/47 (63%)
Frame = +1
Query: 466 QGVKTMGYKEPTPIQAQGWPIAMSGKNLXGVXQTGSGKTLAYILPAI 606
+G+K Y +PT IQ +++G ++ G +TGSGKTLA ++P +
Sbjct: 89 EGLKDNDYTKPTEIQRDTIAYSLTGSDVVGAAKTGSGKTLALVIPVL 135
>AF067608-1|AAC17654.2| 544|Caenorhabditis elegans Hypothetical
protein B0511.6 protein.
Length = 544
Score = 43.2 bits (97), Expect = 2e-04
Identities = 23/70 (32%), Positives = 43/70 (61%)
Frame = +1
Query: 466 QGVKTMGYKEPTPIQAQGWPIAMSGKNLXGVXQTGSGKTLAYILPAIVHINNQPPIRRGD 645
+ V+ +G+ T IQA+ + GK++ +TGSGKTLA++LPAI + ++ ++ +
Sbjct: 81 KAVQGLGFTTMTEIQAKSIDPLLEGKDVLASAKTGSGKTLAFLLPAI-ELLHKLNWKQHN 139
Query: 646 GPIAXVLAPT 675
G +++PT
Sbjct: 140 GTGVIIVSPT 149
>Z81094-7|CAB03153.2| 960|Caenorhabditis elegans Hypothetical
protein F58G11.2 protein.
Length = 960
Score = 42.3 bits (95), Expect = 3e-04
Identities = 25/77 (32%), Positives = 39/77 (50%), Gaps = 5/77 (6%)
Frame = +1
Query: 460 VQQGVKTMGYKEPTPIQAQGWPIAMSGKNLXGVXQTGSGKTLAYILPAIVHI-----NNQ 624
+ + +K + Y IQ P + G ++ G +T +GKT A+ LP I I +
Sbjct: 392 ILETLKRIKYNNVRTIQGAMIPQVLDGHDVLGQAETSAGKTAAFGLPIIDKILRMDEETR 451
Query: 625 PPIRRGDGPIAXVLAPT 675
R+ DGP+A +LAPT
Sbjct: 452 NKARQDDGPLALILAPT 468
>AC006605-1|AAK85443.1| 430|Caenorhabditis elegans Conserved
germline helicase protein1 protein.
Length = 430
Score = 41.5 bits (93), Expect = 5e-04
Identities = 23/69 (33%), Positives = 40/69 (57%)
Frame = +1
Query: 469 GVKTMGYKEPTPIQAQGWPIAMSGKNLXGVXQTGSGKTLAYILPAIVHINNQPPIRRGDG 648
G+ G+++P+PIQ +A++G+++ + G+GKT AY +P I I QP ++
Sbjct: 57 GIFEKGWEKPSPIQEASIGVALTGQDILARAKNGTGKTGAYCIPVIEKI--QPALKAIQ- 113
Query: 649 PIAXVLAPT 675
A V+ PT
Sbjct: 114 --AMVIVPT 120
>Z12116-1|CAA78102.1| 402|Caenorhabditis elegans protein (
C.elegans mRNA for eIF-4A homologue. ).
Length = 402
Score = 39.1 bits (87), Expect = 0.003
Identities = 20/84 (23%), Positives = 46/84 (54%)
Frame = +1
Query: 424 IQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLXGVXQTGSGKTLAYILPA 603
++ F++ + + +G+ G+++P+ IQ + +GK++ Q+G+GKT + +
Sbjct: 28 VESFDDMELKEELLRGIYGFGFEKPSAIQKRAIVPCTTGKDVIAQAQSGTGKTATFSVSI 87
Query: 604 IVHINNQPPIRRGDGPIAXVLAPT 675
+ I+++ P + A V+APT
Sbjct: 88 LQRIDHEDPHVQ-----ALVMAPT 106
>U80447-2|AAO38637.1| 579|Caenorhabditis elegans Hypothetical
protein F55F8.2b protein.
Length = 579
Score = 39.1 bits (87), Expect = 0.003
Identities = 23/70 (32%), Positives = 38/70 (54%), Gaps = 7/70 (10%)
Frame = +1
Query: 487 YKEPTPIQAQGWPIAMSGK-NLXGVXQTGSGKTLAYILPAIVHI------NNQPPIRRGD 645
+ EPT IQ+ P A+ + ++ G +TGSGKTLA+ +P + + + +
Sbjct: 8 FSEPTEIQSAVLPAAVRDRQDVLGAAETGSGKTLAFGIPLVARLLESSDDSQETESTEVR 67
Query: 646 GPIAXVLAPT 675
GP A ++APT
Sbjct: 68 GPRALIVAPT 77
>U13876-3|AAA21170.1| 402|Caenorhabditis elegans Initiation factor
protein 1, isoforma protein.
Length = 402
Score = 39.1 bits (87), Expect = 0.003
Identities = 20/84 (23%), Positives = 46/84 (54%)
Frame = +1
Query: 424 IQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLXGVXQTGSGKTLAYILPA 603
++ F++ + + +G+ G+++P+ IQ + +GK++ Q+G+GKT + +
Sbjct: 28 VESFDDMELKEELLRGIYGFGFEKPSAIQKRAIVPCTTGKDVIAQAQSGTGKTATFSVSI 87
Query: 604 IVHINNQPPIRRGDGPIAXVLAPT 675
+ I+++ P + A V+APT
Sbjct: 88 LQRIDHEDPHVQ-----ALVMAPT 106
>EU051652-1|ABS85191.1| 973|Caenorhabditis elegans MEL-46 protein.
Length = 973
Score = 38.3 bits (85), Expect = 0.005
Identities = 15/64 (23%), Positives = 37/64 (57%)
Frame = +1
Query: 433 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLXGVXQTGSGKTLAYILPAIVH 612
FE + +K + P+P+QA+ P+ + G+++ ++G+GKTL + + A+ +
Sbjct: 24 FESLMIGQKTLERLKNSQFDRPSPVQARAIPVGLLGRDMLVQAKSGTGKTLVFSVLAVEN 83
Query: 613 INNQ 624
++++
Sbjct: 84 LDSR 87
>CU457744-1|CAM36366.2| 973|Caenorhabditis elegans Hypothetical
protein T06A10.1 protein.
Length = 973
Score = 38.3 bits (85), Expect = 0.005
Identities = 15/64 (23%), Positives = 37/64 (57%)
Frame = +1
Query: 433 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLXGVXQTGSGKTLAYILPAIVH 612
FE + +K + P+P+QA+ P+ + G+++ ++G+GKTL + + A+ +
Sbjct: 24 FESLMIGQKTLERLKNSQFDRPSPVQARAIPVGLLGRDMLVQAKSGTGKTLVFSVLAVEN 83
Query: 613 INNQ 624
++++
Sbjct: 84 LDSR 87
>AF039720-12|AAB96704.1| 399|Caenorhabditis elegans Hypothetical
protein F33D11.10 protein.
Length = 399
Score = 38.3 bits (85), Expect = 0.005
Identities = 20/86 (23%), Positives = 45/86 (52%)
Frame = +1
Query: 418 NPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLXGVXQTGSGKTLAYIL 597
N I F++ + + +G+ G+++P+ IQ + P + +++ Q+G+GKT + +
Sbjct: 23 NVIPTFDKMGLREDLLRGIYAYGFEKPSAIQQRAVPAILKARDVIAQAQSGTGKTATFSI 82
Query: 598 PAIVHINNQPPIRRGDGPIAXVLAPT 675
+ ++ Q +R A +L+PT
Sbjct: 83 SVLQSLDTQ--VRETQ---ALILSPT 103
>Z50071-3|CAA90407.1| 613|Caenorhabditis elegans Hypothetical
protein T07D4.4c protein.
Length = 613
Score = 37.5 bits (83), Expect = 0.009
Identities = 21/67 (31%), Positives = 33/67 (49%), Gaps = 2/67 (2%)
Frame = +1
Query: 424 IQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSG--KNLXGVXQTGSGKTLAYIL 597
I F E V + + TM ++ PT IQ P+ + NL Q+G+GKT A++L
Sbjct: 208 ISSFRELRLKPEVLKALDTMNFQFPTRIQETALPLLLMEPPSNLIAQAQSGTGKTAAFVL 267
Query: 598 PAIVHIN 618
+ I+
Sbjct: 268 TMLCRID 274
>Z50071-2|CAA90406.1| 638|Caenorhabditis elegans Hypothetical
protein T07D4.4b protein.
Length = 638
Score = 37.5 bits (83), Expect = 0.009
Identities = 21/67 (31%), Positives = 33/67 (49%), Gaps = 2/67 (2%)
Frame = +1
Query: 424 IQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSG--KNLXGVXQTGSGKTLAYIL 597
I F E V + + TM ++ PT IQ P+ + NL Q+G+GKT A++L
Sbjct: 233 ISSFRELRLKPEVLKALDTMNFQFPTRIQETALPLLLMEPPSNLIAQAQSGTGKTAAFVL 292
Query: 598 PAIVHIN 618
+ I+
Sbjct: 293 TMLCRID 299
>Z50071-1|CAA90408.1| 1022|Caenorhabditis elegans Hypothetical
protein T07D4.4a protein.
Length = 1022
Score = 37.5 bits (83), Expect = 0.009
Identities = 21/67 (31%), Positives = 33/67 (49%), Gaps = 2/67 (2%)
Frame = +1
Query: 424 IQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSG--KNLXGVXQTGSGKTLAYIL 597
I F E V + + TM ++ PT IQ P+ + NL Q+G+GKT A++L
Sbjct: 617 ISSFRELRLKPEVLKALDTMNFQFPTRIQETALPLLLMEPPSNLIAQAQSGTGKTAAFVL 676
Query: 598 PAIVHIN 618
+ I+
Sbjct: 677 TMLCRID 683
>AC024844-2|AAK29954.2| 399|Caenorhabditis elegans Hypothetical
protein Y65B4A.6 protein.
Length = 399
Score = 36.7 bits (81), Expect = 0.015
Identities = 19/84 (22%), Positives = 44/84 (52%)
Frame = +1
Query: 424 IQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLXGVXQTGSGKTLAYILPA 603
I F++ + + +G+ G+++P+ IQ + P + +++ Q+G+GKT + +
Sbjct: 25 IPTFDKMGLREDLLRGIYAYGFEKPSAIQQRAIPAILKARDVIAQAQSGTGKTATFSISV 84
Query: 604 IVHINNQPPIRRGDGPIAXVLAPT 675
+ ++ Q +R A +L+PT
Sbjct: 85 LQSLDTQ--VRETQ---ALILSPT 103
>AC024830-10|AAF59610.3| 728|Caenorhabditis elegans Hypothetical
protein Y55F3BR.1 protein.
Length = 728
Score = 36.7 bits (81), Expect = 0.015
Identities = 17/56 (30%), Positives = 29/56 (51%)
Frame = +1
Query: 433 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLXGVXQTGSGKTLAYILP 600
FEE + + ++ + PT +Q++ P + G + +TGSGKT A+ LP
Sbjct: 4 FEEFGIIPELSDALSSLNWTLPTAVQSEAIPAILGGADALIAAETGSGKTGAFSLP 59
>Z22177-1|CAA80151.1| 578|Caenorhabditis elegans Hypothetical
protein ZK512.2 protein.
Length = 578
Score = 31.1 bits (67), Expect = 0.75
Identities = 20/66 (30%), Positives = 33/66 (50%)
Frame = +1
Query: 424 IQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLXGVXQTGSGKTLAYILPA 603
++ F E P+ ++ V YK T +Q ++ ++ TGSGKTLA++LP
Sbjct: 10 LKTFREKLGPELLE--VFDKSYKSFTDVQVLSGTHLLNLSDVVVESPTGSGKTLAFVLPM 67
Query: 604 IVHINN 621
+ I N
Sbjct: 68 MRMIQN 73
>L17337-1|AAP68928.1| 593|Caenorhabditis elegans Hypothetical
protein ZK686.2 protein.
Length = 593
Score = 30.7 bits (66), Expect = 0.99
Identities = 10/21 (47%), Positives = 16/21 (76%)
Frame = +1
Query: 565 TGSGKTLAYILPAIVHINNQP 627
TGSGKT+ Y+LP + + ++P
Sbjct: 165 TGSGKTICYVLPVLAAVGSKP 185
>Z79752-5|CAB02082.3| 1119|Caenorhabditis elegans Hypothetical
protein D2005.5 protein.
Length = 1119
Score = 29.9 bits (64), Expect = 1.7
Identities = 15/32 (46%), Positives = 18/32 (56%)
Frame = +1
Query: 529 AMSGKNLXGVXQTGSGKTLAYILPAIVHINNQ 624
A+ GKN V TGSGKT I A+ HI +
Sbjct: 382 ALEGKNCVIVAPTGSGKTEVAIYAALKHIEER 413
>U13876-12|AAA21169.1| 363|Caenorhabditis elegans Hypothetical
protein F57B9.3 protein.
Length = 363
Score = 29.9 bits (64), Expect = 1.7
Identities = 14/51 (27%), Positives = 28/51 (54%)
Frame = +1
Query: 466 QGVKTMGYKEPTPIQAQGWPIAMSGKNLXGVXQTGSGKTLAYILPAIVHIN 618
+G+ G+++P+ IQ +GK++ Q GSGKT+ ++ + I+
Sbjct: 9 RGIYGFGFEKPSAIQKSAVAPCTTGKDVTIQSQAGSGKTVISLIDILQGID 59
>Z99710-10|CAN99659.1| 222|Caenorhabditis elegans Hypothetical
protein F08A8.8 protein.
Length = 222
Score = 29.5 bits (63), Expect = 2.3
Identities = 17/39 (43%), Positives = 22/39 (56%)
Frame = +2
Query: 134 VETVVPNLEEATNSAIIRLGLATVAIDLEDLEALVGKKN 250
+ETV+ LE N +RL A VA E LE++ GK N
Sbjct: 71 IETVILALEAGMNLEDVRLEFAHVATREEILESVFGKLN 109
>Z68220-9|CAL64002.1| 312|Caenorhabditis elegans Hypothetical
protein T20D3.5b protein.
Length = 312
Score = 29.1 bits (62), Expect = 3.0
Identities = 11/24 (45%), Positives = 17/24 (70%)
Frame = -2
Query: 189 RRIIAEFVASSKFGTTVSTAIIPI 118
+++I +FVA S G T+STA P+
Sbjct: 220 QQLIGDFVAGSLLGATISTAFFPL 243
>Z68220-8|CAA92487.1| 221|Caenorhabditis elegans Hypothetical
protein T20D3.5a protein.
Length = 221
Score = 29.1 bits (62), Expect = 3.0
Identities = 11/24 (45%), Positives = 17/24 (70%)
Frame = -2
Query: 189 RRIIAEFVASSKFGTTVSTAIIPI 118
+++I +FVA S G T+STA P+
Sbjct: 129 QQLIGDFVAGSLLGATISTAFFPL 152
>Z38112-4|CAA86232.1| 809|Caenorhabditis elegans Hypothetical
protein E03A3.2 protein.
Length = 809
Score = 29.1 bits (62), Expect = 3.0
Identities = 11/16 (68%), Positives = 14/16 (87%)
Frame = +1
Query: 565 TGSGKTLAYILPAIVH 612
TG+GK+L Y LPA+VH
Sbjct: 203 TGAGKSLCYQLPAVVH 218
>AC006714-20|AAK29723.2| 281|Caenorhabditis elegans Serpentine
receptor, class z protein9 protein.
Length = 281
Score = 29.1 bits (62), Expect = 3.0
Identities = 15/61 (24%), Positives = 32/61 (52%)
Frame = -2
Query: 546 ILSRHSYRPALSLNGRRFFVTHCLYTLLHIIRKICFFKVLNRIMNLNATYSYLVFISILF 367
++ R +YR N + + + Y + +I + F + + ++NLN T +L I+I+F
Sbjct: 26 LVYRKAYRFNSERNTATYPIVNSFYKKVALINALYFIESILIVVNLNVTNEWLNKIAIIF 85
Query: 366 D 364
+
Sbjct: 86 N 86
>AC006714-16|AAK29721.3| 281|Caenorhabditis elegans Serpentine
receptor, class z protein8 protein.
Length = 281
Score = 29.1 bits (62), Expect = 3.0
Identities = 15/61 (24%), Positives = 32/61 (52%)
Frame = -2
Query: 546 ILSRHSYRPALSLNGRRFFVTHCLYTLLHIIRKICFFKVLNRIMNLNATYSYLVFISILF 367
++ R +YR N + + + Y + +I + F + + ++NLN T +L I+I+F
Sbjct: 26 LVYRKAYRFNSERNTATYPIVNSFYKKVALINALYFIESILIVVNLNVTNEWLNKIAIIF 85
Query: 366 D 364
+
Sbjct: 86 N 86
>U00052-13|AAW88393.1| 608|Caenorhabditis elegans Hypothetical
protein K02F3.12b protein.
Length = 608
Score = 28.7 bits (61), Expect = 4.0
Identities = 13/36 (36%), Positives = 20/36 (55%)
Frame = +1
Query: 502 PIQAQGWPIAMSGKNLXGVXQTGSGKTLAYILPAIV 609
P+Q MS ++ + TG GK+L Y LPA++
Sbjct: 89 PLQRAAINAVMSKEDAVVILSTGGGKSLCYQLPALL 124
>U00052-12|AAK21428.2| 631|Caenorhabditis elegans Hypothetical
protein K02F3.12a protein.
Length = 631
Score = 28.7 bits (61), Expect = 4.0
Identities = 13/36 (36%), Positives = 20/36 (55%)
Frame = +1
Query: 502 PIQAQGWPIAMSGKNLXGVXQTGSGKTLAYILPAIV 609
P+Q MS ++ + TG GK+L Y LPA++
Sbjct: 112 PLQRAAINAVMSKEDAVVILSTGGGKSLCYQLPALL 147
>AL110485-3|CAB60351.1| 2145|Caenorhabditis elegans Hypothetical
protein Y46G5A.4 protein.
Length = 2145
Score = 28.3 bits (60), Expect = 5.3
Identities = 17/49 (34%), Positives = 23/49 (46%), Gaps = 1/49 (2%)
Frame = +1
Query: 484 GYKEPTPIQAQGW-PIAMSGKNLXGVXQTGSGKTLAYILPAIVHINNQP 627
G+K PIQ Q + + S +N+ GSGKT L + H N P
Sbjct: 1318 GFKVFNPIQTQVFRTVFESNENVIVCAPNGSGKTAIAELAVLRHFENTP 1366
>Z81103-2|CAB03213.1| 403|Caenorhabditis elegans Hypothetical
protein M04G12.1b protein.
Length = 403
Score = 27.9 bits (59), Expect = 7.0
Identities = 17/56 (30%), Positives = 26/56 (46%), Gaps = 3/56 (5%)
Frame = +1
Query: 328 PHPTVLKRSPYEVEEYRNKHEVTVSGVEVHNPIQYFEEAN---FPDYVQQGVKTMG 486
P PTVL SP+ V N +V H + +AN D +QQ ++++G
Sbjct: 144 PQPTVLPTSPFHVPTMNNLEQVL-----THQRLLQMTQANPRAVDDLIQQSLRSLG 194
>Z81103-1|CAB03208.2| 457|Caenorhabditis elegans Hypothetical
protein M04G12.1a protein.
Length = 457
Score = 27.9 bits (59), Expect = 7.0
Identities = 17/56 (30%), Positives = 26/56 (46%), Gaps = 3/56 (5%)
Frame = +1
Query: 328 PHPTVLKRSPYEVEEYRNKHEVTVSGVEVHNPIQYFEEAN---FPDYVQQGVKTMG 486
P PTVL SP+ V N +V H + +AN D +QQ ++++G
Sbjct: 171 PQPTVLPTSPFHVPTMNNLEQVL-----THQRLLQMTQANPRAVDDLIQQSLRSLG 221
>AC091124-2|AAK27879.2| 1114|Caenorhabditis elegans Hypothetical
protein Y47A7.1 protein.
Length = 1114
Score = 27.9 bits (59), Expect = 7.0
Identities = 11/23 (47%), Positives = 14/23 (60%)
Frame = +3
Query: 48 PASXSIHSLNXHLQLNPKNNHVW 116
PAS +H L+ LQLN N+ W
Sbjct: 773 PASHQLHCLSRALQLNKANDSAW 795
>U64840-7|AAB04965.1| 340|Caenorhabditis elegans Hypothetical
protein ZC317.1 protein.
Length = 340
Score = 27.5 bits (58), Expect = 9.2
Identities = 12/34 (35%), Positives = 18/34 (52%)
Frame = +1
Query: 505 IQAQGWPIAMSGKNLXGVXQTGSGKTLAYILPAI 606
+Q + G+ L TG GKT A+++PAI
Sbjct: 19 VQQMSIQVIREGRGLVVEAPTGIGKTYAFLIPAI 52
>U53141-4|AAA96106.1| 528|Caenorhabditis elegans Mutator protein 14
protein.
Length = 528
Score = 27.5 bits (58), Expect = 9.2
Identities = 12/34 (35%), Positives = 18/34 (52%)
Frame = +1
Query: 505 IQAQGWPIAMSGKNLXGVXQTGSGKTLAYILPAI 606
+Q + G+ L TG GKT A+++PAI
Sbjct: 119 VQQMSIQVIREGRGLVVEAPTGIGKTYAFLIPAI 152
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,665,261
Number of Sequences: 27780
Number of extensions: 303926
Number of successful extensions: 961
Number of sequences better than 10.0: 62
Number of HSP's better than 10.0 without gapping: 909
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 958
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1529108810
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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