Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P01_F_L04
         (689 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292379-1|CAL23191.2|  376|Tribolium castaneum gustatory recept...    22   4.1  
DQ414248-1|ABD63010.2|  311|Tribolium castaneum sloppy-paired pr...    21   7.2  
DQ211693-1|ABB16909.1|  314|Tribolium castaneum dorsocross protein.    21   7.2  

>AM292379-1|CAL23191.2|  376|Tribolium castaneum gustatory receptor
           candidate 58 protein.
          Length = 376

 Score = 22.2 bits (45), Expect = 4.1
 Identities = 8/16 (50%), Positives = 12/16 (75%)
 Frame = +2

Query: 152 YKRHYQLINXQLGRRL 199
           +K+ YQLIN Q+  R+
Sbjct: 191 FKQRYQLINEQMAVRI 206


>DQ414248-1|ABD63010.2|  311|Tribolium castaneum sloppy-paired
           protein.
          Length = 311

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 9/19 (47%), Positives = 11/19 (57%)
 Frame = +3

Query: 222 PYKESKERKMDHMLPSPYN 278
           P KES+E+K     P  YN
Sbjct: 71  PEKESEEKKSKEKPPYSYN 89


>DQ211693-1|ABB16909.1|  314|Tribolium castaneum dorsocross protein.
          Length = 314

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 14/42 (33%), Positives = 19/42 (45%)
 Frame = +3

Query: 561 SSQQMLSQASPAPMTPLTPLSADPXILPQLQNIVSTVNLDCK 686
           SS +     S  P +P +  SA P   PQL+      NL C+
Sbjct: 206 SSAKRKQLVSEHPDSPNSKKSATPSPPPQLEVNERKENLTCQ 247


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 142,259
Number of Sequences: 336
Number of extensions: 2559
Number of successful extensions: 5
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18114270
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)