Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P01_F_L04
         (689 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_05_0548 + 25439649-25439734,25440712-25440799,25441160-254412...    37   0.013
10_08_0114 - 14911119-14911301,14911458-14911550,14911634-149116...    36   0.040
06_03_0191 - 17720512-17721435,17721718-17721843,17721940-177221...    30   2.0  
12_02_0891 + 24065001-24065101,24065260-24065345,24065902-240659...    29   3.5  
06_02_0251 - 13478902-13478952,13478989-13479055,13479168-134793...    28   8.0  

>03_05_0548 +
           25439649-25439734,25440712-25440799,25441160-25441204,
           25441407-25441478,25442402-25442452,25442527-25442571,
           25442670-25442762,25442848-25442949,25443024-25443097,
           25443130-25443160
          Length = 228

 Score = 37.1 bits (82), Expect = 0.013
 Identities = 16/18 (88%), Positives = 17/18 (94%)
 Frame = +3

Query: 636 ILPQLQNIVSTVNLDCKL 689
           I+P LQNIVSTVNLDCKL
Sbjct: 24  IIPTLQNIVSTVNLDCKL 41


>10_08_0114 -
           14911119-14911301,14911458-14911550,14911634-14911678,
           14911831-14911953,14912090-14912177,14912976-14913118
          Length = 224

 Score = 35.5 bits (78), Expect = 0.040
 Identities = 15/18 (83%), Positives = 17/18 (94%)
 Frame = +3

Query: 636 ILPQLQNIVSTVNLDCKL 689
           I+P LQNIVSTVNLDC+L
Sbjct: 43  IVPTLQNIVSTVNLDCRL 60


>06_03_0191 -
           17720512-17721435,17721718-17721843,17721940-17722140,
           17722189-17722332,17722415-17722722,17723433-17723568,
           17723748-17723841,17723976-17724073,17724951-17725004,
           17725704-17726150,17726227-17726393,17726540-17726663,
           17726751-17726837,17727000-17727056,17727492-17727560,
           17727664-17727811,17727893-17728116,17728842-17728958,
           17729649-17729742,17730573-17730640,17733278-17733334,
           17733412-17733511,17733638-17733674,17734077-17734200,
           17735254-17735322,17735371-17735410,17735905-17735993,
           17736849-17736953,17737033-17737104,17737814-17737936,
           17738049-17738117,17738966-17739059,17739145-17739231,
           17740184-17740351,17740436-17740552,17741484-17741590,
           17741671-17741803,17742564-17742667,17743504-17743629,
           17744148-17744216,17744996-17745064,17745278-17745358,
           17745444-17745533,17745896-17746000,17747803-17747873,
           17748320-17748461,17749266-17749330,17750081-17750168,
           17750236-17750325,17750437-17750673,17751064-17751170,
           17751625-17751832,17752376-17752546
          Length = 2366

 Score = 29.9 bits (64), Expect = 2.0
 Identities = 15/51 (29%), Positives = 31/51 (60%)
 Frame = -1

Query: 320 VFFRLMQWCTYSRYVIRTWQHMIHFSFFTFFIWKLRVSVLVSVDLTXYLLI 168
           VFF L   C++S+ ++R + HM H+S+  + +W L  ++ + + L+   L+
Sbjct: 318 VFF-LQLTCSHSK-LVRFYTHMHHYSYLLWVLWYLPGTITLCLFLSWSQLL 366


>12_02_0891 +
           24065001-24065101,24065260-24065345,24065902-24065965,
           24066137-24066224,24066810-24066881,24067821-24067871,
           24067940-24067984,24068086-24068178,24068265-24068366,
           24068442-24068515,24068540-24068579
          Length = 271

 Score = 29.1 bits (62), Expect = 3.5
 Identities = 12/13 (92%), Positives = 13/13 (100%)
 Frame = +3

Query: 651 QNIVSTVNLDCKL 689
           +NIVSTVNLDCKL
Sbjct: 84  KNIVSTVNLDCKL 96


>06_02_0251 -
           13478902-13478952,13478989-13479055,13479168-13479379,
           13480144-13481540,13481574-13482432,13482537-13482836
          Length = 961

 Score = 27.9 bits (59), Expect = 8.0
 Identities = 12/38 (31%), Positives = 24/38 (63%)
 Frame = +2

Query: 473 NSQLCNSATDDAASNSTKYDVSDDSCRKSIKSTNAKPS 586
           +S++ +  T+D AS S+ YD+ ++S  +S K++    S
Sbjct: 665 SSEIDSIGTNDNASTSSVYDLPEESIHQSAKNSTENTS 702


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,823,161
Number of Sequences: 37544
Number of extensions: 269790
Number of successful extensions: 777
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 762
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 777
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1756684372
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)