Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P01_F_L03
(624 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At2g05630.1 68415.m00599 autophagy 8d (APG8d) identical to autop... 118 4e-27
At3g60640.1 68416.m06785 autophagy 8g (APG8g) identical to autop... 114 4e-26
At2g45170.2 68415.m05624 autophagy 8e (APG8e) identical to autop... 114 5e-26
At2g45170.1 68415.m05623 autophagy 8e (APG8e) identical to autop... 114 5e-26
At4g16520.2 68417.m02501 autophagy 8f (APG8f) identical to autop... 113 7e-26
At4g16520.1 68417.m02500 autophagy 8f (APG8f) identical to autop... 113 7e-26
At4g04620.2 68417.m00676 autophagy 8b (APG8b) identical to autop... 109 1e-24
At4g04620.1 68417.m00675 autophagy 8b (APG8b) identical to autop... 109 1e-24
At4g21980.1 68417.m03182 autophagy 8a (APG8a) identical to autop... 109 2e-24
At1g62040.1 68414.m06997 autophagy 8c (APG8c) identical to autop... 106 1e-23
At3g15580.1 68416.m01974 autophagy 8i (APG8i) identical to autop... 91 5e-19
At3g06420.1 68416.m00740 autophagy 8h (APG8h) identical to autop... 83 1e-16
At5g06680.1 68418.m00754 tubulin family protein similar to SP|Q9... 30 1.1
At4g16990.3 68417.m02563 disease resistance protein (TIR-NBS cla... 28 4.4
At4g16990.2 68417.m02562 disease resistance protein (TIR-NBS cla... 28 4.4
At4g16990.1 68417.m02561 disease resistance protein (TIR-NBS cla... 28 4.4
At2g17260.1 68415.m01993 glutamate receptor family protein (GLR3... 28 4.4
At1g49050.1 68414.m05500 aspartyl protease family protein contai... 28 4.4
>At2g05630.1 68415.m00599 autophagy 8d (APG8d) identical to
autophagy 8d [Arabidopsis thaliana] GI:19912157;
contains Pfam profile PF02991: Microtubule associated
protein 1A/1B, light chain 3
Length = 120
Score = 118 bits (283), Expect = 4e-27
Identities = 52/111 (46%), Positives = 74/111 (66%)
Frame = +1
Query: 58 KASHSFAXRKAEGAKXXXXXXXXXXXXXXKAPKARLGXLDKKKYLVPSDLTVGQFYFLIR 237
K H R+AE A+ +A K+ + +D+KKYLVP+DLTVGQF +++R
Sbjct: 7 KHEHPLEKRQAEAARIREKYPDRIPVIVERAEKSDVPDIDRKKYLVPADLTVGQFVYVVR 66
Query: 238 KRIHLRPEDALFFFVNNVIPPTSATMGSLYQEHHDEDFFLYIAFSDENVYG 390
KRI L PE A+F FV N++PPT+A M ++Y+EH DED FLY+++S EN +G
Sbjct: 67 KRIKLSPEKAIFIFVKNILPPTAAIMSAIYEEHKDEDGFLYMSYSGENTFG 117
>At3g60640.1 68416.m06785 autophagy 8g (APG8g) identical to
autophagy 8g [Arabidopsis thaliana] GI:19912163;
contains Pfam profile PF02991: Microtubule associated
protein 1A/1B, light chain 3; supporting cDNA
gi|19912162|dbj|AB073181.1|
Length = 121
Score = 114 bits (275), Expect = 4e-26
Identities = 52/112 (46%), Positives = 72/112 (64%)
Frame = +1
Query: 58 KASHSFAXRKAEGAKXXXXXXXXXXXXXXKAPKARLGXLDKKKYLVPSDLTVGQFYFLIR 237
+ H F RKAE + K+ K+ + +DKKKYLVP+DLTVGQF ++IR
Sbjct: 7 RQDHDFEKRKAEALRIREKYSDRVPVIVEKSEKSDIPNIDKKKYLVPADLTVGQFVYVIR 66
Query: 238 KRIHLRPEDALFFFVNNVIPPTSATMGSLYQEHHDEDFFLYIAFSDENVYGN 393
KRI L E A+F FV+NV+PPT A M ++Y E+ +ED FLY+ +S EN +G+
Sbjct: 67 KRIQLSAEKAIFIFVDNVLPPTGAMMSTIYDENKEEDGFLYVTYSGENTFGS 118
>At2g45170.2 68415.m05624 autophagy 8e (APG8e) identical to
autophagy 8e [Arabidopsis thaliana] GI:19912159;
contains Pfam profile PF02991: Microtubule associated
protein 1A/1B, light chain 3
Length = 122
Score = 114 bits (274), Expect = 5e-26
Identities = 55/111 (49%), Positives = 69/111 (62%)
Frame = +1
Query: 58 KASHSFAXRKAEGAKXXXXXXXXXXXXXXKAPKARLGXLDKKKYLVPSDLTVGQFYFLIR 237
K F RKAE + KA K+ + +DKKKYLVPSDLTVGQF ++IR
Sbjct: 8 KMDDDFEKRKAEAGRIREKYPDRIPVIVEKAEKSEVPNIDKKKYLVPSDLTVGQFVYVIR 67
Query: 238 KRIHLRPEDALFFFVNNVIPPTSATMGSLYQEHHDEDFFLYIAFSDENVYG 390
KRI L E A+F FV+NV+PPT M S+Y++ DED FLYI +S EN +G
Sbjct: 68 KRIKLSAEKAIFIFVDNVLPPTGELMSSVYEDKKDEDGFLYITYSGENTFG 118
>At2g45170.1 68415.m05623 autophagy 8e (APG8e) identical to
autophagy 8e [Arabidopsis thaliana] GI:19912159;
contains Pfam profile PF02991: Microtubule associated
protein 1A/1B, light chain 3
Length = 122
Score = 114 bits (274), Expect = 5e-26
Identities = 55/111 (49%), Positives = 69/111 (62%)
Frame = +1
Query: 58 KASHSFAXRKAEGAKXXXXXXXXXXXXXXKAPKARLGXLDKKKYLVPSDLTVGQFYFLIR 237
K F RKAE + KA K+ + +DKKKYLVPSDLTVGQF ++IR
Sbjct: 8 KMDDDFEKRKAEAGRIREKYPDRIPVIVEKAEKSEVPNIDKKKYLVPSDLTVGQFVYVIR 67
Query: 238 KRIHLRPEDALFFFVNNVIPPTSATMGSLYQEHHDEDFFLYIAFSDENVYG 390
KRI L E A+F FV+NV+PPT M S+Y++ DED FLYI +S EN +G
Sbjct: 68 KRIKLSAEKAIFIFVDNVLPPTGELMSSVYEDKKDEDGFLYITYSGENTFG 118
>At4g16520.2 68417.m02501 autophagy 8f (APG8f) identical to
autophagy 8f [Arabidopsis thaliana] GI:19912161;
contains Pfam profile PF02991: Microtubule associated
protein 1A/1B, light chain 3
Length = 121
Score = 113 bits (273), Expect = 7e-26
Identities = 53/111 (47%), Positives = 70/111 (63%)
Frame = +1
Query: 58 KASHSFAXRKAEGAKXXXXXXXXXXXXXXKAPKARLGXLDKKKYLVPSDLTVGQFYFLIR 237
K H R+AE A+ KA K+ + +DKKKYLVP+DLTVGQF ++IR
Sbjct: 7 KQEHDLEKRRAEAARIREKYPDRIPVIVEKAEKSDIPTIDKKKYLVPADLTVGQFVYVIR 66
Query: 238 KRIHLRPEDALFFFVNNVIPPTSATMGSLYQEHHDEDFFLYIAFSDENVYG 390
KRI L E A+F FV+NV+PP A M S+Y+E D+D FLY+ +S EN +G
Sbjct: 67 KRIKLSAEKAIFIFVDNVLPPAGALMSSVYEEKKDDDGFLYVTYSGENTFG 117
>At4g16520.1 68417.m02500 autophagy 8f (APG8f) identical to
autophagy 8f [Arabidopsis thaliana] GI:19912161;
contains Pfam profile PF02991: Microtubule associated
protein 1A/1B, light chain 3
Length = 121
Score = 113 bits (273), Expect = 7e-26
Identities = 53/111 (47%), Positives = 70/111 (63%)
Frame = +1
Query: 58 KASHSFAXRKAEGAKXXXXXXXXXXXXXXKAPKARLGXLDKKKYLVPSDLTVGQFYFLIR 237
K H R+AE A+ KA K+ + +DKKKYLVP+DLTVGQF ++IR
Sbjct: 7 KQEHDLEKRRAEAARIREKYPDRIPVIVEKAEKSDIPTIDKKKYLVPADLTVGQFVYVIR 66
Query: 238 KRIHLRPEDALFFFVNNVIPPTSATMGSLYQEHHDEDFFLYIAFSDENVYG 390
KRI L E A+F FV+NV+PP A M S+Y+E D+D FLY+ +S EN +G
Sbjct: 67 KRIKLSAEKAIFIFVDNVLPPAGALMSSVYEEKKDDDGFLYVTYSGENTFG 117
>At4g04620.2 68417.m00676 autophagy 8b (APG8b) identical to
autophagy 8b [Arabidopsis thaliana] GI:19912153;
contains Pfam profile PF02991: Microtubule associated
protein 1A/1B, light chain 3
Length = 122
Score = 109 bits (263), Expect = 1e-24
Identities = 51/114 (44%), Positives = 71/114 (62%)
Frame = +1
Query: 58 KASHSFAXRKAEGAKXXXXXXXXXXXXXXKAPKARLGXLDKKKYLVPSDLTVGQFYFLIR 237
K S+ R AE + KA ++ + +DKKKYLVP+DLT+GQF +++R
Sbjct: 7 KLSNPLEMRMAESTRIRAKYPERVPVIVEKAGQSDVPDIDKKKYLVPADLTIGQFVYVVR 66
Query: 238 KRIHLRPEDALFFFVNNVIPPTSATMGSLYQEHHDEDFFLYIAFSDENVYGN*F 399
KRI L E A+F FV N +PPT+A M ++Y+EH DED FLY+ +S EN +G F
Sbjct: 67 KRIKLGAEKAIFVFVKNTLPPTAALMSAIYEEHKDEDGFLYMTYSGENTFGGSF 120
>At4g04620.1 68417.m00675 autophagy 8b (APG8b) identical to
autophagy 8b [Arabidopsis thaliana] GI:19912153;
contains Pfam profile PF02991: Microtubule associated
protein 1A/1B, light chain 3
Length = 122
Score = 109 bits (263), Expect = 1e-24
Identities = 51/114 (44%), Positives = 71/114 (62%)
Frame = +1
Query: 58 KASHSFAXRKAEGAKXXXXXXXXXXXXXXKAPKARLGXLDKKKYLVPSDLTVGQFYFLIR 237
K S+ R AE + KA ++ + +DKKKYLVP+DLT+GQF +++R
Sbjct: 7 KLSNPLEMRMAESTRIRAKYPERVPVIVEKAGQSDVPDIDKKKYLVPADLTIGQFVYVVR 66
Query: 238 KRIHLRPEDALFFFVNNVIPPTSATMGSLYQEHHDEDFFLYIAFSDENVYGN*F 399
KRI L E A+F FV N +PPT+A M ++Y+EH DED FLY+ +S EN +G F
Sbjct: 67 KRIKLGAEKAIFVFVKNTLPPTAALMSAIYEEHKDEDGFLYMTYSGENTFGGSF 120
>At4g21980.1 68417.m03182 autophagy 8a (APG8a) identical to
autophagy 8a [Arabidopsis thaliana] GI:19912151;
contains Pfam profile PF02991: Microtubule associated
protein 1A/1B, light chain 3
Length = 122
Score = 109 bits (261), Expect = 2e-24
Identities = 50/112 (44%), Positives = 72/112 (64%)
Frame = +1
Query: 58 KASHSFAXRKAEGAKXXXXXXXXXXXXXXKAPKARLGXLDKKKYLVPSDLTVGQFYFLIR 237
K S+ R +E ++ KA ++ + +DKKKYLVP+DLTVGQF +++R
Sbjct: 7 KISNPLEARMSESSRIREKYPDRIPVIVEKAGQSDVPDIDKKKYLVPADLTVGQFVYVVR 66
Query: 238 KRIHLRPEDALFFFVNNVIPPTSATMGSLYQEHHDEDFFLYIAFSDENVYGN 393
KRI L E A+F FV N +PPT+A M ++Y+EH DED FLY+ +S EN +G+
Sbjct: 67 KRIKLGAEKAIFVFVKNTLPPTAALMSAIYEEHKDEDGFLYMTYSGENTFGS 118
>At1g62040.1 68414.m06997 autophagy 8c (APG8c) identical to
autophagy 8c [Arabidopsis thaliana] GI:19912155;
contains Pfam profile PF02991: Microtubule associated
protein 1A/1B, light chain 3
Length = 119
Score = 106 bits (254), Expect = 1e-23
Identities = 48/111 (43%), Positives = 69/111 (62%)
Frame = +1
Query: 58 KASHSFAXRKAEGAKXXXXXXXXXXXXXXKAPKARLGXLDKKKYLVPSDLTVGQFYFLIR 237
K H R+ E ++ +A ++ + +DKKKYLVP+DLTVGQF +++R
Sbjct: 7 KLEHPLERRQIESSRIREKYPDRIPVIVERAERSDVPNIDKKKYLVPADLTVGQFVYVVR 66
Query: 238 KRIHLRPEDALFFFVNNVIPPTSATMGSLYQEHHDEDFFLYIAFSDENVYG 390
KRI L E A+F FV N +PPT+A M ++Y E+ DED FLY+ +S EN +G
Sbjct: 67 KRIKLSAEKAIFVFVKNTLPPTAAMMSAIYDENKDEDGFLYMTYSGENTFG 117
>At3g15580.1 68416.m01974 autophagy 8i (APG8i) identical to
autophagy 8i [Arabidopsis thaliana] GI:19912167;
contains Pfam profile PF02991: Microtubule associated
protein 1A/1B, light chain 3; supporting cDNA
gi|21636957|gb|AF492760.1|
Length = 115
Score = 91.1 bits (216), Expect = 5e-19
Identities = 42/111 (37%), Positives = 64/111 (57%)
Frame = +1
Query: 58 KASHSFAXRKAEGAKXXXXXXXXXXXXXXKAPKARLGXLDKKKYLVPSDLTVGQFYFLIR 237
K ++ R AE + K K L ++KKK+LVP D++VGQF +++
Sbjct: 5 KEQYTLDERLAESREIIAKYPTRIPVIAEKYCKTDLPAIEKKKFLVPRDMSVGQFIYILS 64
Query: 238 KRIHLRPEDALFFFVNNVIPPTSATMGSLYQEHHDEDFFLYIAFSDENVYG 390
R+HL P ALF FVNN +P T+A M S+Y+ + D+D F+Y+ +S E +G
Sbjct: 65 ARLHLSPGKALFVFVNNTLPQTAALMDSVYESYKDDDGFVYMCYSSEKTFG 115
>At3g06420.1 68416.m00740 autophagy 8h (APG8h) identical to
autophagy 8h [Arabidopsis thaliana] GI:19912165;
contains Pfam profile PF02991: Microtubule associated
protein 1A/1B, light chain 3; supporting cDNA
gi|19912164|dbj|AB073182.1|
Length = 119
Score = 83.4 bits (197), Expect = 1e-16
Identities = 38/82 (46%), Positives = 52/82 (63%)
Frame = +1
Query: 145 KAPKARLGXLDKKKYLVPSDLTVGQFYFLIRKRIHLRPEDALFFFVNNVIPPTSATMGSL 324
K A L ++K KYLVP D+TVG F ++ KR+ L P ALF FV+N +P T++ M SL
Sbjct: 38 KYSNADLPDMEKNKYLVPRDMTVGHFIHMLSKRMQLDPSKALFVFVHNTLPQTASRMDSL 97
Query: 325 YQEHHDEDFFLYIAFSDENVYG 390
Y +ED FLY+ +S E +G
Sbjct: 98 YNTFKEEDGFLYMCYSTEKTFG 119
>At5g06680.1 68418.m00754 tubulin family protein similar to
SP|Q96CW5 Gamma-tubulin complex component 3 {Homo
sapiens}
Length = 838
Score = 30.3 bits (65), Expect = 1.1
Identities = 15/37 (40%), Positives = 19/37 (51%), Gaps = 1/37 (2%)
Frame = +3
Query: 384 LWKLI-PNYSLSNSFTLSDHMVKFNLSLRLKLCIILW 491
+WK + PN SNSF VK L L+ C +LW
Sbjct: 622 IWKTMKPNCITSNSFVKLQSSVKLQLLSALRRCQVLW 658
>At4g16990.3 68417.m02563 disease resistance protein (TIR-NBS
class), putative domain signature TIR-NBS exists,
suggestive of a disease resistance protein.
Length = 801
Score = 28.3 bits (60), Expect = 4.4
Identities = 18/59 (30%), Positives = 30/59 (50%)
Frame = -1
Query: 294 NDIVHEEEKCVFRPQVNTFPDQEVELANC*IRRN*ILLFVEXSKPSLRRFXYNYRNASW 118
+ +V K + R +NTF D +E + +LL +E S+ SL F NY +++W
Sbjct: 22 HSLVSHLRKELDRKFINTFNDNRIERSRKITPE--LLLAIENSRISLVVFSKNYASSTW 78
>At4g16990.2 68417.m02562 disease resistance protein (TIR-NBS
class), putative domain signature TIR-NBS exists,
suggestive of a disease resistance protein.
Length = 796
Score = 28.3 bits (60), Expect = 4.4
Identities = 18/59 (30%), Positives = 30/59 (50%)
Frame = -1
Query: 294 NDIVHEEEKCVFRPQVNTFPDQEVELANC*IRRN*ILLFVEXSKPSLRRFXYNYRNASW 118
+ +V K + R +NTF D +E + +LL +E S+ SL F NY +++W
Sbjct: 22 HSLVSHLRKELDRKFINTFNDNRIERSRKITPE--LLLAIENSRISLVVFSKNYASSTW 78
>At4g16990.1 68417.m02561 disease resistance protein (TIR-NBS
class), putative domain signature TIR-NBS exists,
suggestive of a disease resistance protein.
Length = 520
Score = 28.3 bits (60), Expect = 4.4
Identities = 18/59 (30%), Positives = 30/59 (50%)
Frame = -1
Query: 294 NDIVHEEEKCVFRPQVNTFPDQEVELANC*IRRN*ILLFVEXSKPSLRRFXYNYRNASW 118
+ +V K + R +NTF D +E + +LL +E S+ SL F NY +++W
Sbjct: 22 HSLVSHLRKELDRKFINTFNDNRIERSRKITPE--LLLAIENSRISLVVFSKNYASSTW 78
>At2g17260.1 68415.m01993 glutamate receptor family protein (GLR3.1)
(GLR2) identical to putative glutamate receptor GLR2
[Arabidopsis thaliana] gi|4185740|gb|AAD09174; plant
glutamate receptor family, PMID:11379626
Length = 951
Score = 28.3 bits (60), Expect = 4.4
Identities = 11/35 (31%), Positives = 20/35 (57%)
Frame = +3
Query: 426 TLSDHMVKFNLSLRLKLCIILWYFFIINWHIILYL 530
T S H K +L LK ++ +FF +NW ++ ++
Sbjct: 5 TFSFHFSKVSLCFLLKQLLLYGFFFSMNWVLLSFI 39
>At1g49050.1 68414.m05500 aspartyl protease family protein contains
Pfam PF00026: Eukaryotic aspartyl protease; contains
similarity to nucellin GI:2290203 from [Hordeum vulgare]
Length = 583
Score = 28.3 bits (60), Expect = 4.4
Identities = 11/32 (34%), Positives = 20/32 (62%)
Frame = +1
Query: 175 DKKKYLVPSDLTVGQFYFLIRKRIHLRPEDAL 270
D KK+ P L +G + +I +++ ++PED L
Sbjct: 485 DVKKFFRPITLQIGSKWLIISRKLLIQPEDYL 516
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,607,513
Number of Sequences: 28952
Number of extensions: 215691
Number of successful extensions: 513
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 504
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 512
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1265787216
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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