Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P01_F_L02
         (736 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292351-1|CAL23163.2|  394|Tribolium castaneum gustatory recept...    26   0.27 
AM292350-1|CAL23162.2|  429|Tribolium castaneum gustatory recept...    26   0.27 
AM292328-1|CAL23140.2|  429|Tribolium castaneum gustatory recept...    26   0.27 
EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggeri...    24   1.5  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    23   3.4  
AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    23   3.4  
EF592538-1|ABQ95984.1|  582|Tribolium castaneum beta-N-acetylglu...    21   7.8  

>AM292351-1|CAL23163.2|  394|Tribolium castaneum gustatory receptor
           candidate 30 protein.
          Length = 394

 Score = 26.2 bits (55), Expect = 0.27
 Identities = 16/55 (29%), Positives = 24/55 (43%)
 Frame = -2

Query: 732 WNIPMSLLNNFITKSIIILWGLNFVVNIFAALTLRGLLYNIFKIPKTTLWMHNQK 568
           +NI M+L+  FIT     +W  N   ++F  L    L Y   ++   T  M   K
Sbjct: 208 YNIVMALVLQFITLQHTFIWVFN---DVFVMLLSTALAYRFTQVTDRTQSMSESK 259


>AM292350-1|CAL23162.2|  429|Tribolium castaneum gustatory receptor
           candidate 29 protein.
          Length = 429

 Score = 26.2 bits (55), Expect = 0.27
 Identities = 16/55 (29%), Positives = 24/55 (43%)
 Frame = -2

Query: 732 WNIPMSLLNNFITKSIIILWGLNFVVNIFAALTLRGLLYNIFKIPKTTLWMHNQK 568
           +NI M+L+  FIT     +W  N   ++F  L    L Y   ++   T  M   K
Sbjct: 208 YNIVMALVLQFITLQHTFIWVFN---DVFVMLLSTALAYRFTQVTDRTQSMSESK 259


>AM292328-1|CAL23140.2|  429|Tribolium castaneum gustatory receptor
           candidate 7 protein.
          Length = 429

 Score = 26.2 bits (55), Expect = 0.27
 Identities = 16/55 (29%), Positives = 24/55 (43%)
 Frame = -2

Query: 732 WNIPMSLLNNFITKSIIILWGLNFVVNIFAALTLRGLLYNIFKIPKTTLWMHNQK 568
           +NI M+L+  FIT     +W  N   ++F  L    L Y   ++   T  M   K
Sbjct: 208 YNIVMALVLQFITLQHTFIWVFN---DVFVMLLSTALAYRFTQVTDRTQSMSESK 259


>EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggering
           hormone receptorisoform A protein.
          Length = 434

 Score = 23.8 bits (49), Expect = 1.5
 Identities = 17/45 (37%), Positives = 23/45 (51%)
 Frame = -3

Query: 617 IIYLRYQKLLYGCIIKNKFLSNHHTFEHTKIIDLL*LEALKKYIV 483
           II L    +LY CII    +SN  T    K ID + L A K+ ++
Sbjct: 247 IIPLIILLILY-CIIAKNLMSNAATLVLNKHIDNISLRARKQVVL 290


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = +3

Query: 198  LNYLLNKGADPNVV 239
            LNY + KGADP  +
Sbjct: 2546 LNYWIEKGADPGKI 2559


>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 12/33 (36%), Positives = 19/33 (57%)
 Frame = -2

Query: 516 IIIRSFKKIYC*IFV*IYTLA*QSKFISEMIKV 418
           I+IRSFK  Y  +   + T   QSK + E++ +
Sbjct: 191 ILIRSFKSRYKDLNQKLETACEQSKSVEELMNI 223


>EF592538-1|ABQ95984.1|  582|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG3 protein.
          Length = 582

 Score = 21.4 bits (43), Expect = 7.8
 Identities = 8/24 (33%), Positives = 13/24 (54%)
 Frame = +3

Query: 225 DPNVVDKHGISVLLAAIWEGHTDC 296
           DP+ V  HG  V+ + +   + DC
Sbjct: 444 DPSSVLSHGHRVIYSTVGHWYLDC 467


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 159,167
Number of Sequences: 336
Number of extensions: 3594
Number of successful extensions: 9
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19675845
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)