Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P01_F_L01
(376 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q9VH69 Cluster: 40S ribosomal protein S29; n=31; Eukary... 96 2e-19
UniRef50_P62273 Cluster: 40S ribosomal protein S29; n=66; Eukary... 89 3e-17
UniRef50_Q8INN0 Cluster: CG8495-PC, isoform C; n=1; Drosophila m... 79 2e-14
UniRef50_P90983 Cluster: Ribosomal protein, small subunit protei... 79 3e-14
UniRef50_UPI0000E202DC Cluster: PREDICTED: similar to ribosomal ... 78 5e-14
UniRef50_A1DNZ6 Cluster: 40S ribosomal protein S29, putative; n=... 71 5e-12
UniRef50_Q680P8 Cluster: 40S ribosomal protein S29; n=4; Eukaryo... 71 9e-12
UniRef50_Q1DQB3 Cluster: Predicted protein; n=4; Pezizomycotina|... 69 3e-11
UniRef50_P54110 Cluster: 30S ribosomal protein S14P; n=7; Methan... 69 3e-11
UniRef50_UPI0001554864 Cluster: PREDICTED: similar to ribosomal ... 68 6e-11
UniRef50_O28368 Cluster: 30S ribosomal protein S14P; n=2; cellul... 66 1e-10
UniRef50_O74329 Cluster: 40S ribosomal protein S29; n=12; cellul... 64 8e-10
UniRef50_Q4Q817 Cluster: Ribosomal protein s29, putative; n=5; T... 63 2e-09
UniRef50_Q6CFB0 Cluster: Similar to sp|P41057 Saccharomyces cere... 62 2e-09
UniRef50_Q013Q2 Cluster: RS29_CULQU 40S ribosomal protein S29; n... 60 1e-08
UniRef50_O05635 Cluster: 30S ribosomal protein S14P; n=11; Therm... 58 7e-08
UniRef50_Q74NE6 Cluster: 30S ribosomal protein S14P; n=2; Archae... 58 7e-08
UniRef50_Q8SS73 Cluster: 40S ribosomal protein S29; n=1; Encepha... 55 4e-07
UniRef50_Q22MB0 Cluster: Putative uncharacterized protein; n=1; ... 54 6e-07
UniRef50_Q97BW2 Cluster: 30S ribosomal protein S14P; n=12; Archa... 54 1e-06
UniRef50_Q7R0P0 Cluster: GLP_79_44835_45248; n=1; Giardia lambli... 52 5e-06
UniRef50_Q9HPC0 Cluster: 30S ribosomal protein S14P; n=8; Euryar... 50 1e-05
UniRef50_P62012 Cluster: 30S ribosomal protein S14P; n=10; Archa... 48 4e-05
UniRef50_P26816 Cluster: 30S ribosomal protein S14P; n=3; Haloba... 47 1e-04
UniRef50_Q8XHT6 Cluster: 30S ribosomal protein S14 type Z; n=83;... 36 0.32
UniRef50_A6CEA5 Cluster: Probable deca-heme c-type cytochrome; n... 33 1.7
UniRef50_Q7NEG5 Cluster: 30S ribosomal protein S14 type Z; n=3; ... 33 1.7
UniRef50_A2ZKX8 Cluster: Putative uncharacterized protein; n=3; ... 27 2.9
UniRef50_UPI0000F32986 Cluster: UPI0000F32986 related cluster; n... 32 3.9
UniRef50_Q2S713 Cluster: Transcriptional regulator; n=1; Hahella... 31 5.2
UniRef50_Q2H445 Cluster: Predicted protein; n=1; Chaetomium glob... 31 5.2
UniRef50_Q9GTH4 Cluster: Nuclear receptor NHR-43; n=3; Caenorhab... 31 6.9
UniRef50_Q3IPC2 Cluster: Predicted helicase; n=2; Halobacteriace... 31 9.1
UniRef50_Q9PQP7 Cluster: 30S ribosomal protein S14 type Z; n=145... 31 9.1
>UniRef50_Q9VH69 Cluster: 40S ribosomal protein S29; n=31;
Eukaryota|Rep: 40S ribosomal protein S29 - Drosophila
melanogaster (Fruit fly)
Length = 56
Score = 95.9 bits (228), Expect = 2e-19
Identities = 40/43 (93%), Positives = 42/43 (97%)
Frame = +2
Query: 128 YGQGSRSCRSCSNRHGLIRKYGLNICRQCFREYAHDIGFKKLD 256
YGQGSR CR+CSNRHGLIRKYGLNICRQCFREYA+DIGFKKLD
Sbjct: 14 YGQGSRCCRACSNRHGLIRKYGLNICRQCFREYANDIGFKKLD 56
>UniRef50_P62273 Cluster: 40S ribosomal protein S29; n=66;
Eukaryota|Rep: 40S ribosomal protein S29 - Homo sapiens
(Human)
Length = 56
Score = 88.6 bits (210), Expect = 3e-17
Identities = 37/43 (86%), Positives = 40/43 (93%)
Frame = +2
Query: 128 YGQGSRSCRSCSNRHGLIRKYGLNICRQCFREYAHDIGFKKLD 256
+GQGSRSCR CSNRHGLIRKYGLN+CRQCFR+YA DIGF KLD
Sbjct: 14 FGQGSRSCRVCSNRHGLIRKYGLNMCRQCFRQYAKDIGFIKLD 56
>UniRef50_Q8INN0 Cluster: CG8495-PC, isoform C; n=1; Drosophila
melanogaster|Rep: CG8495-PC, isoform C - Drosophila
melanogaster (Fruit fly)
Length = 55
Score = 79.4 bits (187), Expect = 2e-14
Identities = 33/35 (94%), Positives = 35/35 (100%)
Frame = +2
Query: 152 RSCSNRHGLIRKYGLNICRQCFREYAHDIGFKKLD 256
R+CSNRHGLIRKYGLNICRQCFREYA+DIGFKKLD
Sbjct: 21 RACSNRHGLIRKYGLNICRQCFREYANDIGFKKLD 55
>UniRef50_P90983 Cluster: Ribosomal protein, small subunit protein
29; n=18; Eukaryota|Rep: Ribosomal protein, small
subunit protein 29 - Caenorhabditis elegans
Length = 56
Score = 79.0 bits (186), Expect = 3e-14
Identities = 32/43 (74%), Positives = 37/43 (86%)
Frame = +2
Query: 128 YGQGSRSCRSCSNRHGLIRKYGLNICRQCFREYAHDIGFKKLD 256
+G GSRSCR C+ HGLIRKYGL++CR+CFRE A DIGFKKLD
Sbjct: 14 FGPGSRSCRVCAGHHGLIRKYGLDLCRRCFREQARDIGFKKLD 56
>UniRef50_UPI0000E202DC Cluster: PREDICTED: similar to ribosomal
protein S29; n=4; Theria|Rep: PREDICTED: similar to
ribosomal protein S29 - Pan troglodytes
Length = 56
Score = 78.2 bits (184), Expect = 5e-14
Identities = 34/43 (79%), Positives = 36/43 (83%)
Frame = +2
Query: 128 YGQGSRSCRSCSNRHGLIRKYGLNICRQCFREYAHDIGFKKLD 256
+GQGSRSCR SNRHG IRKYGLN CRQCF +YA DIGF KLD
Sbjct: 14 FGQGSRSCRVYSNRHGRIRKYGLNKCRQCFHQYAKDIGFIKLD 56
>UniRef50_A1DNZ6 Cluster: 40S ribosomal protein S29, putative; n=2;
Fungi/Metazoa group|Rep: 40S ribosomal protein S29,
putative - Neosartorya fischeri (strain ATCC 1020 / DSM
3700 / NRRL 181)(Aspergillus fischerianus (strain ATCC
1020 / DSM 3700 / NRRL 181))
Length = 86
Score = 71.3 bits (167), Expect = 5e-12
Identities = 29/42 (69%), Positives = 36/42 (85%)
Frame = +2
Query: 128 YGQGSRSCRSCSNRHGLIRKYGLNICRQCFREYAHDIGFKKL 253
+G+GSR CR C++R GLIRKYG++ICRQCFRE A DIGF K+
Sbjct: 14 FGKGSRECRVCAHRAGLIRKYGMDICRQCFREKAQDIGFYKV 55
>UniRef50_Q680P8 Cluster: 40S ribosomal protein S29; n=4;
Eukaryota|Rep: 40S ribosomal protein S29 - Arabidopsis
thaliana (Mouse-ear cress)
Length = 56
Score = 70.5 bits (165), Expect = 9e-12
Identities = 30/41 (73%), Positives = 31/41 (75%)
Frame = +2
Query: 128 YGQGSRSCRSCSNRHGLIRKYGLNICRQCFREYAHDIGFKK 250
YG GSR CR C N HGLIRKYGLN CRQCFR A +IGF K
Sbjct: 14 YGPGSRLCRVCGNSHGLIRKYGLNCCRQCFRSNAKEIGFIK 54
>UniRef50_Q1DQB3 Cluster: Predicted protein; n=4;
Pezizomycotina|Rep: Predicted protein - Coccidioides
immitis
Length = 123
Score = 68.9 bits (161), Expect = 3e-11
Identities = 28/41 (68%), Positives = 34/41 (82%)
Frame = +2
Query: 128 YGQGSRSCRSCSNRHGLIRKYGLNICRQCFREYAHDIGFKK 250
YG+GSR CR C+++ GLIRKYGL +CRQCFRE + DIGF K
Sbjct: 14 YGKGSRQCRVCAHKAGLIRKYGLLVCRQCFREKSQDIGFVK 54
>UniRef50_P54110 Cluster: 30S ribosomal protein S14P; n=7;
Methanococcales|Rep: 30S ribosomal protein S14P -
Methanococcus jannaschii
Length = 53
Score = 68.9 bits (161), Expect = 3e-11
Identities = 30/44 (68%), Positives = 34/44 (77%), Gaps = 1/44 (2%)
Frame = +2
Query: 128 YGQGSRSCRSCSN-RHGLIRKYGLNICRQCFREYAHDIGFKKLD 256
YG G R C+ C + GLIRKYGLN+CRQCFRE AH +GFKKLD
Sbjct: 10 YGYGIRPCQRCGHVGPGLIRKYGLNLCRQCFREIAHKLGFKKLD 53
>UniRef50_UPI0001554864 Cluster: PREDICTED: similar to ribosomal
protein S29; n=1; Ornithorhynchus anatinus|Rep:
PREDICTED: similar to ribosomal protein S29 -
Ornithorhynchus anatinus
Length = 168
Score = 67.7 bits (158), Expect = 6e-11
Identities = 28/33 (84%), Positives = 30/33 (90%)
Frame = +2
Query: 152 RSCSNRHGLIRKYGLNICRQCFREYAHDIGFKK 250
R CSNRHGLIRKYGLN+CRQCFR+YA DIGF K
Sbjct: 85 RVCSNRHGLIRKYGLNMCRQCFRQYAKDIGFIK 117
>UniRef50_O28368 Cluster: 30S ribosomal protein S14P; n=2; cellular
organisms|Rep: 30S ribosomal protein S14P -
Archaeoglobus fulgidus
Length = 51
Score = 66.5 bits (155), Expect = 1e-10
Identities = 26/42 (61%), Positives = 32/42 (76%)
Frame = +2
Query: 125 VYGQGSRSCRSCSNRHGLIRKYGLNICRQCFREYAHDIGFKK 250
V+G+G+ CR C R GLIR YGL +CRQCFRE A ++GFKK
Sbjct: 8 VFGRGANECRRCGRRRGLIRMYGLYLCRQCFREVASELGFKK 49
>UniRef50_O74329 Cluster: 40S ribosomal protein S29; n=12; cellular
organisms|Rep: 40S ribosomal protein S29 -
Schizosaccharomyces pombe (Fission yeast)
Length = 56
Score = 64.1 bits (149), Expect = 8e-10
Identities = 29/41 (70%), Positives = 31/41 (75%)
Frame = +2
Query: 128 YGQGSRSCRSCSNRHGLIRKYGLNICRQCFREYAHDIGFKK 250
YG+GSR C R GLIRKYGLNI RQ FREYA+DIGF K
Sbjct: 14 YGKGSRQCAHTGRRLGLIRKYGLNISRQSFREYANDIGFVK 54
>UniRef50_Q4Q817 Cluster: Ribosomal protein s29, putative; n=5;
Trypanosomatidae|Rep: Ribosomal protein s29, putative -
Leishmania major
Length = 57
Score = 62.9 bits (146), Expect = 2e-09
Identities = 27/41 (65%), Positives = 31/41 (75%)
Frame = +2
Query: 131 GQGSRSCRSCSNRHGLIRKYGLNICRQCFREYAHDIGFKKL 253
G+G+R C CSN+ LIRKY LN+CRQCFRE A IGF KL
Sbjct: 16 GKGARCCVICSNQKALIRKYELNVCRQCFRENAEHIGFTKL 56
>UniRef50_Q6CFB0 Cluster: Similar to sp|P41057 Saccharomyces
cerevisiae YLR388w YS29A ribosomal protein S29; n=1;
Yarrowia lipolytica|Rep: Similar to sp|P41057
Saccharomyces cerevisiae YLR388w YS29A ribosomal protein
S29 - Yarrowia lipolytica (Candida lipolytica)
Length = 78
Score = 62.5 bits (145), Expect = 2e-09
Identities = 26/41 (63%), Positives = 32/41 (78%)
Frame = +2
Query: 128 YGQGSRSCRSCSNRHGLIRKYGLNICRQCFREYAHDIGFKK 250
YG+G R CR +N++ +IRKYGLN+CRQ FRE A DIGF K
Sbjct: 36 YGKGGRKCRITNNQNAVIRKYGLNLCRQSFREKAADIGFTK 76
>UniRef50_Q013Q2 Cluster: RS29_CULQU 40S ribosomal protein S29; n=1;
Ostreococcus tauri|Rep: RS29_CULQU 40S ribosomal protein
S29 - Ostreococcus tauri
Length = 157
Score = 60.1 bits (139), Expect = 1e-08
Identities = 25/36 (69%), Positives = 28/36 (77%)
Frame = +2
Query: 143 RSCRSCSNRHGLIRKYGLNICRQCFREYAHDIGFKK 250
R R C N+ +IRKY LNICRQCFREYA DIGF+K
Sbjct: 120 RRSRVCENQWAIIRKYNLNICRQCFREYAKDIGFQK 155
>UniRef50_O05635 Cluster: 30S ribosomal protein S14P; n=11;
Thermoprotei|Rep: 30S ribosomal protein S14P -
Sulfolobus acidocaldarius
Length = 54
Score = 57.6 bits (133), Expect = 7e-08
Identities = 21/41 (51%), Positives = 32/41 (78%)
Frame = +2
Query: 128 YGQGSRSCRSCSNRHGLIRKYGLNICRQCFREYAHDIGFKK 250
+G+G + C+ C +R +I+KYGL +CRQCFRE A+ +GF+K
Sbjct: 12 FGKGVQLCKRCGSRDSVIQKYGLYLCRQCFREVAYPMGFRK 52
>UniRef50_Q74NE6 Cluster: 30S ribosomal protein S14P; n=2;
Archaea|Rep: 30S ribosomal protein S14P - Nanoarchaeum
equitans
Length = 69
Score = 57.6 bits (133), Expect = 7e-08
Identities = 20/41 (48%), Positives = 30/41 (73%)
Frame = +2
Query: 128 YGQGSRSCRSCSNRHGLIRKYGLNICRQCFREYAHDIGFKK 250
+G+G+R C C G+IR+YGL +C+ CF+E AH++GF K
Sbjct: 26 FGKGARRCERCGRYDGIIRRYGLYLCKDCFKEVAHELGFFK 66
>UniRef50_Q8SS73 Cluster: 40S ribosomal protein S29; n=1;
Encephalitozoon cuniculi|Rep: 40S ribosomal protein S29
- Encephalitozoon cuniculi
Length = 55
Score = 55.2 bits (127), Expect = 4e-07
Identities = 26/43 (60%), Positives = 31/43 (72%)
Frame = +2
Query: 128 YGQGSRSCRSCSNRHGLIRKYGLNICRQCFREYAHDIGFKKLD 256
+G+GSRSC SC G+IRK L +CR+CFREYA DIGF D
Sbjct: 15 FGKGSRSCVSCYTFRGIIRK--LMMCRRCFREYAGDIGFAIYD 55
>UniRef50_Q22MB0 Cluster: Putative uncharacterized protein; n=1;
Tetrahymena thermophila SB210|Rep: Putative
uncharacterized protein - Tetrahymena thermophila SB210
Length = 239
Score = 54.4 bits (125), Expect = 6e-07
Identities = 23/42 (54%), Positives = 28/42 (66%)
Frame = +2
Query: 128 YGQGSRSCRSCSNRHGLIRKYGLNICRQCFREYAHDIGFKKL 253
YG+ S+ CR C R GLI KY + CR+CFRE A IGF K+
Sbjct: 13 YGKDSKECRVCGARQGLITKYEMMTCRRCFREQAPHIGFVKV 54
>UniRef50_Q97BW2 Cluster: 30S ribosomal protein S14P; n=12;
Archaea|Rep: 30S ribosomal protein S14P - Thermoplasma
volcanium
Length = 53
Score = 53.6 bits (123), Expect = 1e-06
Identities = 19/34 (55%), Positives = 26/34 (76%)
Frame = +2
Query: 149 CRSCSNRHGLIRKYGLNICRQCFREYAHDIGFKK 250
C C + G++RKYGL++CRQCFRE A +GF+K
Sbjct: 18 CVRCGRKRGIVRKYGLHLCRQCFRETARQLGFEK 51
>UniRef50_Q7R0P0 Cluster: GLP_79_44835_45248; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_79_44835_45248 - Giardia lamblia
ATCC 50803
Length = 137
Score = 51.6 bits (118), Expect = 5e-06
Identities = 22/37 (59%), Positives = 26/37 (70%)
Frame = +2
Query: 143 RSCRSCSNRHGLIRKYGLNICRQCFREYAHDIGFKKL 253
R CR C N + + RKYGL ICR+CF+E A IGF KL
Sbjct: 100 RECRICGNYNSVYRKYGLFICRRCFKENAGKIGFVKL 136
>UniRef50_Q9HPC0 Cluster: 30S ribosomal protein S14P; n=8;
Euryarchaeota|Rep: 30S ribosomal protein S14P -
Halobacterium salinarium (Halobacterium halobium)
Length = 52
Score = 50.4 bits (115), Expect = 1e-05
Identities = 19/37 (51%), Positives = 24/37 (64%)
Frame = +2
Query: 140 SRSCRSCSNRHGLIRKYGLNICRQCFREYAHDIGFKK 250
+ CR C GL+ KY + +CRQCFRE A +GFKK
Sbjct: 14 THECRRCGREQGLVGKYDIWLCRQCFREIARSMGFKK 50
>UniRef50_P62012 Cluster: 30S ribosomal protein S14P; n=10;
Archaea|Rep: 30S ribosomal protein S14P - Pyrococcus
abyssi
Length = 56
Score = 48.4 bits (110), Expect = 4e-05
Identities = 19/43 (44%), Positives = 28/43 (65%)
Frame = +2
Query: 128 YGQGSRSCRSCSNRHGLIRKYGLNICRQCFREYAHDIGFKKLD 256
+G+G+R C C +IR +GL +CR CFRE A +GF+K +
Sbjct: 14 FGKGARRCIRCGQYGPIIRIHGLMLCRHCFREVAPKLGFRKYE 56
>UniRef50_P26816 Cluster: 30S ribosomal protein S14P; n=3;
Halobacteriaceae|Rep: 30S ribosomal protein S14P -
Haloarcula marismortui (Halobacterium marismortui)
Length = 61
Score = 47.2 bits (107), Expect = 1e-04
Identities = 17/35 (48%), Positives = 24/35 (68%)
Frame = +2
Query: 146 SCRSCSNRHGLIRKYGLNICRQCFREYAHDIGFKK 250
SC+ C GL+ KY + +CRQCFRE + +GF+K
Sbjct: 25 SCQRCGREQGLVGKYDIWLCRQCFREISRGMGFRK 59
>UniRef50_Q8XHT6 Cluster: 30S ribosomal protein S14 type Z; n=83;
Bacteria|Rep: 30S ribosomal protein S14 type Z -
Clostridium perfringens
Length = 61
Score = 35.5 bits (78), Expect = 0.32
Identities = 14/28 (50%), Positives = 19/28 (67%)
Frame = +2
Query: 149 CRSCSNRHGLIRKYGLNICRQCFREYAH 232
CR C H +++K+G ICR CFRE A+
Sbjct: 24 CRLCGRPHSVLKKFG--ICRICFRELAY 49
>UniRef50_A6CEA5 Cluster: Probable deca-heme c-type cytochrome; n=1;
Planctomyces maris DSM 8797|Rep: Probable deca-heme
c-type cytochrome - Planctomyces maris DSM 8797
Length = 728
Score = 33.1 bits (72), Expect = 1.7
Identities = 18/48 (37%), Positives = 26/48 (54%), Gaps = 2/48 (4%)
Frame = +2
Query: 101 IFGILTLA-VYGQGSRSCRSCSNRHGLIRKY-GLNICRQCFREYAHDI 238
+FG T + +Y +G R C C N H L K+ G +C QC E +D+
Sbjct: 294 VFGSFTQSKMYRKGVR-CTDCHNPHSLKLKFTGNKLCTQCHLEARYDV 340
>UniRef50_Q7NEG5 Cluster: 30S ribosomal protein S14 type Z; n=3;
Bacteria|Rep: 30S ribosomal protein S14 type Z -
Gloeobacter violaceus
Length = 68
Score = 33.1 bits (72), Expect = 1.7
Identities = 15/28 (53%), Positives = 16/28 (57%)
Frame = +2
Query: 149 CRSCSNRHGLIRKYGLNICRQCFREYAH 232
C C G IR +GL CR CFRE AH
Sbjct: 31 CWRCGRPRGYIRDFGL--CRICFREMAH 56
>UniRef50_A2ZKX8 Cluster: Putative uncharacterized protein; n=3;
Oryza sativa|Rep: Putative uncharacterized protein -
Oryza sativa subsp. indica (Rice)
Length = 141
Score = 27.5 bits (58), Expect(2) = 2.9
Identities = 8/13 (61%), Positives = 12/13 (92%)
Frame = +1
Query: 88 MGHANLWYSHPRS 126
MGH+N+W SHP++
Sbjct: 1 MGHSNVWNSHPKN 13
Score = 23.8 bits (49), Expect(2) = 2.9
Identities = 11/36 (30%), Positives = 20/36 (55%)
Frame = +1
Query: 151 PILLQQAWLNPQVRFEHMQTVLQRVCS*HRIQEAGL 258
P + + +W + +VR +QTVL + HR+ + L
Sbjct: 45 PGVREPSWTDQEVRAHVLQTVLPQQRQGHRLHQGML 80
>UniRef50_UPI0000F32986 Cluster: UPI0000F32986 related cluster; n=1;
Bos taurus|Rep: UPI0000F32986 UniRef100 entry - Bos
Taurus
Length = 54
Score = 31.9 bits (69), Expect = 3.9
Identities = 12/44 (27%), Positives = 24/44 (54%)
Frame = +2
Query: 122 AVYGQGSRSCRSCSNRHGLIRKYGLNICRQCFREYAHDIGFKKL 253
A++G +R CR + + L+ + + +CR+C + +I F L
Sbjct: 10 ALFGSQARGCRKVNTLYLLVPYFSITLCRRCCEQNNKNISFLML 53
>UniRef50_Q2S713 Cluster: Transcriptional regulator; n=1; Hahella
chejuensis KCTC 2396|Rep: Transcriptional regulator -
Hahella chejuensis (strain KCTC 2396)
Length = 329
Score = 31.5 bits (68), Expect = 5.2
Identities = 19/52 (36%), Positives = 27/52 (51%), Gaps = 5/52 (9%)
Frame = -2
Query: 207 LHMFKPYLRIKPC---LLEQDRHDRDPCPXTARVRIPKICVAHFKKL--NCC 67
LH+ KP L I+P ++ RHDRDP R +I +A + K +CC
Sbjct: 256 LHVTKPPLEIRPTPVSMIWHARHDRDPGVLWLREKIKFFTIAEWLKYLPSCC 307
>UniRef50_Q2H445 Cluster: Predicted protein; n=1; Chaetomium
globosum|Rep: Predicted protein - Chaetomium globosum
(Soil fungus)
Length = 174
Score = 31.5 bits (68), Expect = 5.2
Identities = 18/57 (31%), Positives = 29/57 (50%)
Frame = +3
Query: 21 SSPSCXVSLICCSLAXNNLIS*NGPRKSLVFSPSQXTDKDLGHADPAPTGMA*SAST 191
S P+ +L+CC L S L+ SP++ K GHA+P+ +G++ ST
Sbjct: 12 SDPASQPTLLCCFLTVAMPKSSKADPPVLLLSPAELAHKQAGHAEPS-SGISLRKST 67
>UniRef50_Q9GTH4 Cluster: Nuclear receptor NHR-43; n=3;
Caenorhabditis|Rep: Nuclear receptor NHR-43 -
Caenorhabditis elegans
Length = 459
Score = 31.1 bits (67), Expect = 6.9
Identities = 11/34 (32%), Positives = 18/34 (52%)
Frame = +2
Query: 149 CRSCSNRHGLIRKYGLNICRQCFREYAHDIGFKK 250
CR C R+ + +G++ICR C + + KK
Sbjct: 57 CRVCERRYDGSQHFGIDICRACAAFFRRSVAVKK 90
>UniRef50_Q3IPC2 Cluster: Predicted helicase; n=2;
Halobacteriaceae|Rep: Predicted helicase - Natronomonas
pharaonis (strain DSM 2160 / ATCC 35678)
Length = 1767
Score = 30.7 bits (66), Expect = 9.1
Identities = 13/31 (41%), Positives = 17/31 (54%), Gaps = 1/31 (3%)
Frame = +2
Query: 137 GSRSCRSCSNRHGLIRK-YGLNICRQCFREY 226
G CR+C+ H R Y L+ CR C +EY
Sbjct: 494 GDIECRTCAQEHDRTRTAYPLSFCRGCGQEY 524
>UniRef50_Q9PQP7 Cluster: 30S ribosomal protein S14 type Z; n=145;
Bacteria|Rep: 30S ribosomal protein S14 type Z -
Ureaplasma parvum (Ureaplasma urealyticum biotype 1)
Length = 61
Score = 30.7 bits (66), Expect = 9.1
Identities = 12/28 (42%), Positives = 17/28 (60%)
Frame = +2
Query: 149 CRSCSNRHGLIRKYGLNICRQCFREYAH 232
C C H + RK+G +CR CFR+ A+
Sbjct: 24 CVRCGRPHAVNRKFG--VCRLCFRDLAY 49
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 285,979,633
Number of Sequences: 1657284
Number of extensions: 4884623
Number of successful extensions: 10157
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 9786
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10153
length of database: 575,637,011
effective HSP length: 91
effective length of database: 424,824,167
effective search space used: 14019197511
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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