Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P01_F_L01
         (376 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ667192-1|ABG75744.1|  489|Apis mellifera pH-sensitive chloride...    23   1.6  
DQ667191-1|ABG75743.1|  475|Apis mellifera pH-sensitive chloride...    23   1.6  
DQ667190-1|ABG75742.1|  509|Apis mellifera pH-sensitive chloride...    23   1.6  
DQ667189-1|ABG75741.1|  458|Apis mellifera pH-sensitive chloride...    23   1.6  
DQ011227-1|AAY63896.1|  484|Apis mellifera Amt-1-like protein pr...    21   6.3  
AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase...    20   8.3  

>DQ667192-1|ABG75744.1|  489|Apis mellifera pH-sensitive chloride
           channel variant 4 protein.
          Length = 489

 Score = 22.6 bits (46), Expect = 1.6
 Identities = 7/15 (46%), Positives = 12/15 (80%)
 Frame = +1

Query: 157 LLQQAWLNPQVRFEH 201
           LLQQ W +P++R+ +
Sbjct: 112 LLQQQWYDPRLRYSN 126


>DQ667191-1|ABG75743.1|  475|Apis mellifera pH-sensitive chloride
           channel variant 3 protein.
          Length = 475

 Score = 22.6 bits (46), Expect = 1.6
 Identities = 7/15 (46%), Positives = 12/15 (80%)
 Frame = +1

Query: 157 LLQQAWLNPQVRFEH 201
           LLQQ W +P++R+ +
Sbjct: 112 LLQQQWYDPRLRYSN 126


>DQ667190-1|ABG75742.1|  509|Apis mellifera pH-sensitive chloride
           channel variant 1 protein.
          Length = 509

 Score = 22.6 bits (46), Expect = 1.6
 Identities = 7/15 (46%), Positives = 12/15 (80%)
 Frame = +1

Query: 157 LLQQAWLNPQVRFEH 201
           LLQQ W +P++R+ +
Sbjct: 163 LLQQQWYDPRLRYSN 177


>DQ667189-1|ABG75741.1|  458|Apis mellifera pH-sensitive chloride
           channel protein.
          Length = 458

 Score = 22.6 bits (46), Expect = 1.6
 Identities = 7/15 (46%), Positives = 12/15 (80%)
 Frame = +1

Query: 157 LLQQAWLNPQVRFEH 201
           LLQQ W +P++R+ +
Sbjct: 112 LLQQQWYDPRLRYSN 126


>DQ011227-1|AAY63896.1|  484|Apis mellifera Amt-1-like protein
           protein.
          Length = 484

 Score = 20.6 bits (41), Expect = 6.3
 Identities = 8/34 (23%), Positives = 18/34 (52%)
 Frame = +2

Query: 92  ATQIFGILTLAVYGQGSRSCRSCSNRHGLIRKYG 193
           A+ I+GI+ + ++        + + R GL++  G
Sbjct: 346 ASGIWGIIAIGLFADNPYPLNTTNGRKGLLKGGG 379


>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
           protein.
          Length = 1143

 Score = 20.2 bits (40), Expect = 8.3
 Identities = 6/14 (42%), Positives = 11/14 (78%)
 Frame = +1

Query: 121 RSXRTRISVMPILL 162
           +S RTR  ++P++L
Sbjct: 222 KSARTRFDILPLIL 235


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 78,867
Number of Sequences: 438
Number of extensions: 1368
Number of successful extensions: 7
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 51
effective length of database: 124,005
effective search space used:  9052365
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)