Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P01_F_K24
(706 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X77020-1|CAA54318.1| 158|Caenorhabditis elegans copper/zinc sup... 159 2e-39
L20135-1|AAA28147.1| 158|Caenorhabditis elegans superoxide dism... 159 2e-39
AC006608-8|AAV34795.1| 158|Caenorhabditis elegans Sod (superoxi... 159 2e-39
AC006608-7|AAF39759.1| 180|Caenorhabditis elegans Sod (superoxi... 159 2e-39
U42833-3|AAA83577.1| 178|Caenorhabditis elegans Sod (superoxide... 152 3e-37
AB190513-1|BAD51397.1| 221|Caenorhabditis elegans superoxide di... 151 5e-37
Z27080-4|CAB61015.1| 176|Caenorhabditis elegans Hypothetical pr... 149 1e-36
AB003924-1|BAA28262.1| 176|Caenorhabditis elegans SOD4-1 protein. 149 1e-36
Z81110-6|CAB03260.2| 1011|Caenorhabditis elegans Hypothetical pr... 34 0.11
Z81110-2|CAB03259.1| 802|Caenorhabditis elegans Hypothetical pr... 34 0.11
AL132948-1|CAC51077.1| 735|Caenorhabditis elegans Hypothetical ... 32 0.46
U41556-7|AAP68954.1| 145|Caenorhabditis elegans Hypothetical pr... 30 1.4
U41556-5|AAK39193.1| 212|Caenorhabditis elegans Hypothetical pr... 30 1.4
U41556-6|AAP68953.1| 248|Caenorhabditis elegans Hypothetical pr... 29 4.3
AL117193-10|CAB60304.1| 337|Caenorhabditis elegans Hypothetical... 28 5.7
Z50029-6|CAD57714.1| 1072|Caenorhabditis elegans Hypothetical pr... 28 7.5
Z50029-5|CAC42384.1| 1096|Caenorhabditis elegans Hypothetical pr... 28 7.5
Z50029-4|CAB63417.1| 1082|Caenorhabditis elegans Hypothetical pr... 28 7.5
Z50029-3|CAB63416.1| 1087|Caenorhabditis elegans Hypothetical pr... 28 7.5
AF087133-1|AAD14595.1| 728|Caenorhabditis elegans alternatively... 28 7.5
AF087132-1|AAD14594.1| 792|Caenorhabditis elegans alternatively... 28 7.5
AF087131-1|AAD14593.1| 1087|Caenorhabditis elegans alternatively... 28 7.5
>X77020-1|CAA54318.1| 158|Caenorhabditis elegans copper/zinc
superoxide dismutase protein.
Length = 158
Score = 159 bits (385), Expect = 2e-39
Identities = 73/121 (60%), Positives = 91/121 (75%), Gaps = 3/121 (2%)
Frame = +3
Query: 228 RXLTKGKHGFHVHEFGDNTNGCTSAGAHFNPEKQDHGGPSSAVRHVGDLGNIEAIEDSGV 407
+ LT G HGFHVH++GD+TNGC SAG HFNP + HGGP S +RHVGDLGN+EA D GV
Sbjct: 36 KGLTPGLHGFHVHQYGDSTNGCISAGPHFNPFGKTHGGPKSEIRHVGDLGNVEAGAD-GV 94
Query: 408 TKVSIQDSQISLHGPNSIIGRTLVVHADPDDLGLG---GHELSKTTGNAGGRIACGVIGL 578
K+ + D+ ++L+GPN+++GR++VVHA DDLG G E SK TGNAG R ACGVI L
Sbjct: 95 AKIKLTDTLVTLYGPNTVVGRSMVVHAGQDDLGEGVGDKAEESKKTGNAGARAACGVIAL 154
Query: 579 A 581
A
Sbjct: 155 A 155
Score = 37.9 bits (84), Expect = 0.007
Identities = 18/41 (43%), Positives = 27/41 (65%), Gaps = 1/41 (2%)
Frame = +2
Query: 125 MPAKAVCVLRGD-VSGTVFFDQQDEKSPVVVSGEVQGLD*G 244
M +AV VLRG+ V+GT++ Q+ E V+ GE++GL G
Sbjct: 1 MSNRAVAVLRGETVTGTIWITQKSENDQAVIEGEIKGLTPG 41
>L20135-1|AAA28147.1| 158|Caenorhabditis elegans superoxide
dismutase protein.
Length = 158
Score = 159 bits (385), Expect = 2e-39
Identities = 73/121 (60%), Positives = 91/121 (75%), Gaps = 3/121 (2%)
Frame = +3
Query: 228 RXLTKGKHGFHVHEFGDNTNGCTSAGAHFNPEKQDHGGPSSAVRHVGDLGNIEAIEDSGV 407
+ LT G HGFHVH++GD+TNGC SAG HFNP + HGGP S +RHVGDLGN+EA D GV
Sbjct: 36 KGLTPGLHGFHVHQYGDSTNGCISAGPHFNPFGKTHGGPKSEIRHVGDLGNVEAGAD-GV 94
Query: 408 TKVSIQDSQISLHGPNSIIGRTLVVHADPDDLGLG---GHELSKTTGNAGGRIACGVIGL 578
K+ + D+ ++L+GPN+++GR++VVHA DDLG G E SK TGNAG R ACGVI L
Sbjct: 95 AKIKLTDTLVTLYGPNTVVGRSMVVHAGQDDLGEGVGDKAEESKKTGNAGARAACGVIAL 154
Query: 579 A 581
A
Sbjct: 155 A 155
Score = 37.9 bits (84), Expect = 0.007
Identities = 18/41 (43%), Positives = 27/41 (65%), Gaps = 1/41 (2%)
Frame = +2
Query: 125 MPAKAVCVLRGD-VSGTVFFDQQDEKSPVVVSGEVQGLD*G 244
M +AV VLRG+ V+GT++ Q+ E V+ GE++GL G
Sbjct: 1 MSNRAVAVLRGETVTGTIWITQKSENDQAVIEGEIKGLTPG 41
>AC006608-8|AAV34795.1| 158|Caenorhabditis elegans Sod (superoxide
dismutase) protein1, isoform b protein.
Length = 158
Score = 159 bits (385), Expect = 2e-39
Identities = 73/121 (60%), Positives = 91/121 (75%), Gaps = 3/121 (2%)
Frame = +3
Query: 228 RXLTKGKHGFHVHEFGDNTNGCTSAGAHFNPEKQDHGGPSSAVRHVGDLGNIEAIEDSGV 407
+ LT G HGFHVH++GD+TNGC SAG HFNP + HGGP S +RHVGDLGN+EA D GV
Sbjct: 36 KGLTPGLHGFHVHQYGDSTNGCISAGPHFNPFGKTHGGPKSEIRHVGDLGNVEAGAD-GV 94
Query: 408 TKVSIQDSQISLHGPNSIIGRTLVVHADPDDLGLG---GHELSKTTGNAGGRIACGVIGL 578
K+ + D+ ++L+GPN+++GR++VVHA DDLG G E SK TGNAG R ACGVI L
Sbjct: 95 AKIKLTDTLVTLYGPNTVVGRSMVVHAGQDDLGEGVGDKAEESKKTGNAGARAACGVIAL 154
Query: 579 A 581
A
Sbjct: 155 A 155
Score = 37.9 bits (84), Expect = 0.007
Identities = 18/41 (43%), Positives = 27/41 (65%), Gaps = 1/41 (2%)
Frame = +2
Query: 125 MPAKAVCVLRGD-VSGTVFFDQQDEKSPVVVSGEVQGLD*G 244
M +AV VLRG+ V+GT++ Q+ E V+ GE++GL G
Sbjct: 1 MSNRAVAVLRGETVTGTIWITQKSENDQAVIEGEIKGLTPG 41
>AC006608-7|AAF39759.1| 180|Caenorhabditis elegans Sod (superoxide
dismutase) protein1, isoform a protein.
Length = 180
Score = 159 bits (385), Expect = 2e-39
Identities = 73/121 (60%), Positives = 91/121 (75%), Gaps = 3/121 (2%)
Frame = +3
Query: 228 RXLTKGKHGFHVHEFGDNTNGCTSAGAHFNPEKQDHGGPSSAVRHVGDLGNIEAIEDSGV 407
+ LT G HGFHVH++GD+TNGC SAG HFNP + HGGP S +RHVGDLGN+EA D GV
Sbjct: 58 KGLTPGLHGFHVHQYGDSTNGCISAGPHFNPFGKTHGGPKSEIRHVGDLGNVEAGAD-GV 116
Query: 408 TKVSIQDSQISLHGPNSIIGRTLVVHADPDDLGLG---GHELSKTTGNAGGRIACGVIGL 578
K+ + D+ ++L+GPN+++GR++VVHA DDLG G E SK TGNAG R ACGVI L
Sbjct: 117 AKIKLTDTLVTLYGPNTVVGRSMVVHAGQDDLGEGVGDKAEESKKTGNAGARAACGVIAL 176
Query: 579 A 581
A
Sbjct: 177 A 177
Score = 37.9 bits (84), Expect = 0.007
Identities = 18/41 (43%), Positives = 27/41 (65%), Gaps = 1/41 (2%)
Frame = +2
Query: 125 MPAKAVCVLRGD-VSGTVFFDQQDEKSPVVVSGEVQGLD*G 244
M +AV VLRG+ V+GT++ Q+ E V+ GE++GL G
Sbjct: 23 MSNRAVAVLRGETVTGTIWITQKSENDQAVIEGEIKGLTPG 63
>U42833-3|AAA83577.1| 178|Caenorhabditis elegans Sod (superoxide
dismutase) protein5 protein.
Length = 178
Score = 152 bits (368), Expect = 3e-37
Identities = 72/121 (59%), Positives = 87/121 (71%), Gaps = 3/121 (2%)
Frame = +3
Query: 228 RXLTKGKHGFHVHEFGDNTNGCTSAGAHFNPEKQDHGGPSSAVRHVGDLGNIEAIEDSGV 407
+ L+ G HGFH+H++GD+T+GCTSAG HFNP K +HGG S VRHVGDLGN+EA D GV
Sbjct: 56 KGLSPGLHGFHIHQYGDSTDGCTSAGPHFNPCKMNHGGRDSVVRHVGDLGNVEAGAD-GV 114
Query: 408 TKVSIQDSQISLHGPNSIIGRTLVVHADPDDLGLG---GHELSKTTGNAGGRIACGVIGL 578
K+ D +SL G N++IGR++VVH D DDLG G E S TGNAG R ACGVI L
Sbjct: 115 AKIKFSDKVVSLFGANTVIGRSMVVHVDRDDLGQGIDDKAEESLKTGNAGARAACGVIAL 174
Query: 579 A 581
A
Sbjct: 175 A 175
Score = 29.9 bits (64), Expect = 1.9
Identities = 17/38 (44%), Positives = 22/38 (57%), Gaps = 1/38 (2%)
Frame = +2
Query: 134 KAVCVLRGD-VSGTVFFDQQDEKSPVVVSGEVQGLD*G 244
+AV VLRG V GTV+ Q+ E GE++GL G
Sbjct: 24 RAVAVLRGTAVFGTVWLTQKAEGEETEFEGEIKGLSPG 61
>AB190513-1|BAD51397.1| 221|Caenorhabditis elegans superoxide
dismutase protein.
Length = 221
Score = 151 bits (366), Expect = 5e-37
Identities = 77/144 (53%), Positives = 93/144 (64%), Gaps = 1/144 (0%)
Frame = +3
Query: 168 ELFSSISRMKSHLLLFLERS-RXLTKGKHGFHVHEFGDNTNGCTSAGAHFNPEKQDHGGP 344
EL +I +S L L S L GKHGFH+HE GD NGC SAG H+NP K HG P
Sbjct: 39 ELIGTIDFDQSGSFLKLNGSVSGLAAGKHGFHIHEKGDTGNGCLSAGGHYNPHKLSHGAP 98
Query: 345 SSAVRHVGDLGNIEAIEDSGVTKVSIQDSQISLHGPNSIIGRTLVVHADPDDLGLGGHEL 524
+ RH+GDLGNIE+ SG T +S+ DS SL G SIIGR++V+H DDLG G +
Sbjct: 99 DDSNRHIGDLGNIES-PASGDTLISVSDSLASLSGQYSIIGRSVVIHEKTDDLGRGTSDQ 157
Query: 525 SKTTGNAGGRIACGVIGLAKI*IL 596
SKTTGNAG R+ACG IG+ + IL
Sbjct: 158 SKTTGNAGSRLACGTIGIVEERIL 181
>Z27080-4|CAB61015.1| 176|Caenorhabditis elegans Hypothetical
protein F55H2.1 protein.
Length = 176
Score = 149 bits (362), Expect = 1e-36
Identities = 75/137 (54%), Positives = 89/137 (64%), Gaps = 1/137 (0%)
Frame = +3
Query: 168 ELFSSISRMKSHLLLFLERS-RXLTKGKHGFHVHEFGDNTNGCTSAGAHFNPEKQDHGGP 344
EL +I +S L L S L GKHGFH+HE GD NGC SAG H+NP K HG P
Sbjct: 39 ELIGTIDFDQSGSFLKLNGSVSGLAAGKHGFHIHEKGDTGNGCLSAGGHYNPHKLSHGAP 98
Query: 345 SSAVRHVGDLGNIEAIEDSGVTKVSIQDSQISLHGPNSIIGRTLVVHADPDDLGLGGHEL 524
+ RH+GDLGNIE+ SG T +S+ DS SL G SIIGR++V+H DDLG G +
Sbjct: 99 DDSNRHIGDLGNIES-PASGDTLISVSDSLASLSGQYSIIGRSVVIHEKTDDLGRGTSDQ 157
Query: 525 SKTTGNAGGRIACGVIG 575
SKTTGNAG R+ACG IG
Sbjct: 158 SKTTGNAGSRLACGTIG 174
>AB003924-1|BAA28262.1| 176|Caenorhabditis elegans SOD4-1 protein.
Length = 176
Score = 149 bits (362), Expect = 1e-36
Identities = 75/137 (54%), Positives = 89/137 (64%), Gaps = 1/137 (0%)
Frame = +3
Query: 168 ELFSSISRMKSHLLLFLERS-RXLTKGKHGFHVHEFGDNTNGCTSAGAHFNPEKQDHGGP 344
EL +I +S L L S L GKHGFH+HE GD NGC SAG H+NP K HG P
Sbjct: 39 ELIGTIDFDQSGSFLKLNGSVSGLAAGKHGFHIHEKGDTGNGCLSAGGHYNPHKLSHGAP 98
Query: 345 SSAVRHVGDLGNIEAIEDSGVTKVSIQDSQISLHGPNSIIGRTLVVHADPDDLGLGGHEL 524
+ RH+GDLGNIE+ SG T +S+ DS SL G SIIGR++V+H DDLG G +
Sbjct: 99 DDSNRHIGDLGNIES-PASGDTLISVSDSLASLSGQYSIIGRSVVIHEKTDDLGRGTSDQ 157
Query: 525 SKTTGNAGGRIACGVIG 575
SKTTGNAG R+ACG IG
Sbjct: 158 SKTTGNAGSRLACGTIG 174
>Z81110-6|CAB03260.2| 1011|Caenorhabditis elegans Hypothetical protein
T01D3.3b protein.
Length = 1011
Score = 33.9 bits (74), Expect = 0.11
Identities = 12/28 (42%), Positives = 19/28 (67%)
Frame = +3
Query: 234 LTKGKHGFHVHEFGDNTNGCTSAGAHFN 317
L G+H +H+FGD++ GC+ GA F+
Sbjct: 918 LPVGRHAVVLHQFGDSSEGCSRVGAPFS 945
>Z81110-2|CAB03259.1| 802|Caenorhabditis elegans Hypothetical
protein T01D3.3a protein.
Length = 802
Score = 33.9 bits (74), Expect = 0.11
Identities = 12/28 (42%), Positives = 19/28 (67%)
Frame = +3
Query: 234 LTKGKHGFHVHEFGDNTNGCTSAGAHFN 317
L G+H +H+FGD++ GC+ GA F+
Sbjct: 709 LPVGRHAVVLHQFGDSSEGCSRVGAPFS 736
>AL132948-1|CAC51077.1| 735|Caenorhabditis elegans Hypothetical
protein Y39B6A.1 protein.
Length = 735
Score = 31.9 bits (69), Expect = 0.46
Identities = 11/29 (37%), Positives = 14/29 (48%)
Frame = -2
Query: 564 HKQYGHQHYQWSYLAHGHRVPSHQGQHGQ 478
H +G H HGH P+H G HG+
Sbjct: 580 HGSHGVHHGHHESHGHGHHAPAHHGHHGE 608
Score = 29.1 bits (62), Expect = 3.2
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = -2
Query: 564 HKQYGHQHYQWSYLAHGHRVPSHQGQHGQ 478
H H H++ S+ HGH P+H G HG+
Sbjct: 434 HAPAHHGHHE-SH-GHGHHSPAHHGHHGE 460
>U41556-7|AAP68954.1| 145|Caenorhabditis elegans Hypothetical
protein C25B8.4c protein.
Length = 145
Score = 30.3 bits (65), Expect = 1.4
Identities = 16/41 (39%), Positives = 24/41 (58%)
Frame = +1
Query: 517 MS*VRPLVMLVAVLLVESLAWLRFKYFHFSYVGLGTTIFSD 639
MS + LV+LVA + S + + K F++SY GT F+D
Sbjct: 1 MSRIFKLVLLVAAVGFVSTRFAQVKLFNWSYKDFGTNAFTD 41
>U41556-5|AAK39193.1| 212|Caenorhabditis elegans Hypothetical
protein C25B8.4a protein.
Length = 212
Score = 30.3 bits (65), Expect = 1.4
Identities = 16/41 (39%), Positives = 24/41 (58%)
Frame = +1
Query: 517 MS*VRPLVMLVAVLLVESLAWLRFKYFHFSYVGLGTTIFSD 639
MS + LV+LVA + S + + K F++SY GT F+D
Sbjct: 1 MSRIFKLVLLVAAVGFVSTRFAQVKLFNWSYKDFGTNAFTD 41
>U41556-6|AAP68953.1| 248|Caenorhabditis elegans Hypothetical
protein C25B8.4b protein.
Length = 248
Score = 28.7 bits (61), Expect = 4.3
Identities = 14/35 (40%), Positives = 21/35 (60%)
Frame = +1
Query: 535 LVMLVAVLLVESLAWLRFKYFHFSYVGLGTTIFSD 639
LV+LVA + S + + K F++SY GT F+D
Sbjct: 43 LVLLVAAVGFVSTRFAQVKLFNWSYKDFGTNAFTD 77
>AL117193-10|CAB60304.1| 337|Caenorhabditis elegans Hypothetical
protein Y105C5A.17 protein.
Length = 337
Score = 28.3 bits (60), Expect = 5.7
Identities = 17/54 (31%), Positives = 22/54 (40%)
Frame = +3
Query: 162 LAELFSSISRMKSHLLLFLERSRXLTKGKHGFHVHEFGDNTNGCTSAGAHFNPE 323
L + F S R H L + TKG+ + G T CTSAG N +
Sbjct: 162 LLDQFFSFYRFSFHSLRLILSKIKSTKGRDNSNEEWHGCGTTDCTSAGCKKNAD 215
>Z50029-6|CAD57714.1| 1072|Caenorhabditis elegans Hypothetical
protein ZC504.4d protein.
Length = 1072
Score = 27.9 bits (59), Expect = 7.5
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = +3
Query: 474 LVVHADPDDLGLGGHELSKTTGNAGGR 554
L+ H P+DL + ELSK G+ GR
Sbjct: 484 LITHVKPEDLDVLASELSKMGGHHNGR 510
>Z50029-5|CAC42384.1| 1096|Caenorhabditis elegans Hypothetical
protein ZC504.4c protein.
Length = 1096
Score = 27.9 bits (59), Expect = 7.5
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = +3
Query: 474 LVVHADPDDLGLGGHELSKTTGNAGGR 554
L+ H P+DL + ELSK G+ GR
Sbjct: 499 LITHVKPEDLDVLASELSKMGGHHNGR 525
>Z50029-4|CAB63417.1| 1082|Caenorhabditis elegans Hypothetical
protein ZC504.4b protein.
Length = 1082
Score = 27.9 bits (59), Expect = 7.5
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = +3
Query: 474 LVVHADPDDLGLGGHELSKTTGNAGGR 554
L+ H P+DL + ELSK G+ GR
Sbjct: 494 LITHVKPEDLDVLASELSKMGGHHNGR 520
>Z50029-3|CAB63416.1| 1087|Caenorhabditis elegans Hypothetical
protein ZC504.4a protein.
Length = 1087
Score = 27.9 bits (59), Expect = 7.5
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = +3
Query: 474 LVVHADPDDLGLGGHELSKTTGNAGGR 554
L+ H P+DL + ELSK G+ GR
Sbjct: 499 LITHVKPEDLDVLASELSKMGGHHNGR 525
>AF087133-1|AAD14595.1| 728|Caenorhabditis elegans alternatively
spliced serine/threonineprotein kinase MIG-15 protein.
Length = 728
Score = 27.9 bits (59), Expect = 7.5
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = +3
Query: 474 LVVHADPDDLGLGGHELSKTTGNAGGR 554
L+ H P+DL + ELSK G+ GR
Sbjct: 131 LITHVKPEDLDVLASELSKMGGHHNGR 157
>AF087132-1|AAD14594.1| 792|Caenorhabditis elegans alternatively
spliced serine/threonineprotein kinase MIG-15 protein.
Length = 792
Score = 27.9 bits (59), Expect = 7.5
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = +3
Query: 474 LVVHADPDDLGLGGHELSKTTGNAGGR 554
L+ H P+DL + ELSK G+ GR
Sbjct: 204 LITHVKPEDLDVLASELSKMGGHHNGR 230
>AF087131-1|AAD14593.1| 1087|Caenorhabditis elegans alternatively
spliced serine/threonineprotein kinase MIG-15 protein.
Length = 1087
Score = 27.9 bits (59), Expect = 7.5
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = +3
Query: 474 LVVHADPDDLGLGGHELSKTTGNAGGR 554
L+ H P+DL + ELSK G+ GR
Sbjct: 499 LITHVKPEDLDVLASELSKMGGHHNGR 525
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,245,198
Number of Sequences: 27780
Number of extensions: 302592
Number of successful extensions: 828
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 766
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 813
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1634564590
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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