Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P01_F_K22
(560 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC4F6.14 |||RNA-binding protein|Schizosaccharomyces pombe|chr ... 30 0.27
SPBP22H7.02c |||RNA-binding protein Mrd1 |Schizosaccharomyces po... 29 0.35
SPBC32H8.01c ||SPBP22H7.10c|conserved fungal protein|Schizosacch... 28 0.82
SPAC3H1.09c |||vacuolar amino acid transporter |Schizosaccharomy... 28 1.1
SPAC11E3.06 |map1||MADS-box transcription factor Map1|Schizosacc... 27 1.9
SPCC1322.09 |||conserved fungal protein|Schizosaccharomyces pomb... 27 2.5
SPBC11C11.03 |ndc80|ndc10, tid3|spindle pole body protein Ndc80|... 27 2.5
SPBC365.13c |hba1|caf1|Ran GTPase binding protein Hba1|Schizosac... 26 3.3
SPCC569.07 |||aromatic aminotransferase |Schizosaccharomyces pom... 26 3.3
SPBC19F5.05c |ppp1|SPBC25D12.01c|pescadillo-family BRCT domain p... 26 3.3
SPAC16A10.07c |taz1|myb1, myb|human TRF ortholog Taz1|Schizosacc... 26 3.3
SPBC16E9.10c |||AAA family ATPase Rix7 |Schizosaccharomyces pomb... 26 3.3
SPAC6G9.12 |cfr1||Chs five related protein Cfr1|Schizosaccharomy... 25 5.8
SPBC4F6.13c |||WD repeat/BOP1NT protein|Schizosaccharomyces pomb... 25 7.6
SPAPB17E12.10c |||SAM-dependent methyltransferase|Schizosaccharo... 25 7.6
>SPBC4F6.14 |||RNA-binding protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 674
Score = 29.9 bits (64), Expect = 0.27
Identities = 22/79 (27%), Positives = 34/79 (43%)
Frame = +1
Query: 205 VEQLADVDALKPQINGDAHIHEQTAKEKELDSGTPENEKDATTEKEAIENSNEKEAGPVT 384
V+ DA + DA E+ KE D G +DA+ + E+ E + G
Sbjct: 180 VDWAVSKDAFEATTLKDASSEEEN-KEFVSDEGHSIVTEDASADSESEEEVDGHSEGKEL 238
Query: 385 NGESEQKAENGESVTTTPD 441
GESE++ N + V + D
Sbjct: 239 AGESEEEGSNVDDVEDSGD 257
>SPBP22H7.02c |||RNA-binding protein Mrd1 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 833
Score = 29.5 bits (63), Expect = 0.35
Identities = 23/82 (28%), Positives = 34/82 (41%), Gaps = 4/82 (4%)
Frame = +1
Query: 208 EQLADVDALKPQINGDAHIHEQ----TAKEKELDSGTPENEKDATTEKEAIENSNEKEAG 375
E++ D + P I D E AK E DS E D+T + + + EK +
Sbjct: 162 EEVFDTEITNPVIPADEDDDEYQDLPAAKRHEGDS-IKSTEHDSTLDSGVVIDGREKSSS 220
Query: 376 PVTNGESEQKAENGESVTTTPD 441
+ ESEQ AE + + D
Sbjct: 221 ELHEEESEQAAEGDTAKNSGTD 242
>SPBC32H8.01c ||SPBP22H7.10c|conserved fungal
protein|Schizosaccharomyces pombe|chr 2|||Manual
Length = 187
Score = 28.3 bits (60), Expect = 0.82
Identities = 12/35 (34%), Positives = 22/35 (62%)
Frame = +1
Query: 268 EQTAKEKELDSGTPENEKDATTEKEAIENSNEKEA 372
+QT KEK++DS + ENE ++ + E S + ++
Sbjct: 108 QQTEKEKDVDSASAENESINSSSSSSKECSTQTQS 142
>SPAC3H1.09c |||vacuolar amino acid transporter |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 656
Score = 27.9 bits (59), Expect = 1.1
Identities = 17/55 (30%), Positives = 23/55 (41%), Gaps = 2/55 (3%)
Frame = +1
Query: 283 EKELDSGTPENEKDATTEKEAI--ENSNEKEAGPVTNGESEQKAENGESVTTTPD 441
E L + EN D +I EN N ++ VT E +EN S + PD
Sbjct: 54 ESNLPNNVAENTTDTPVNYGSIRDENHNSRKGKDVTLNSDEAHSENVPSTSEDPD 108
>SPAC11E3.06 |map1||MADS-box transcription factor
Map1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 398
Score = 27.1 bits (57), Expect = 1.9
Identities = 14/48 (29%), Positives = 26/48 (54%), Gaps = 1/48 (2%)
Frame = +1
Query: 283 EKELDSGTPENEKDATTEKEAIENSNEKEAG-PVTNGESEQKAENGES 423
E +++ T +NE A+ K++ ++ E+G P+ + E ENG S
Sbjct: 94 ESLINATTDQNESQASQAKQSSAQLSDSESGYPLDHEEMRISEENGPS 141
>SPCC1322.09 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 455
Score = 26.6 bits (56), Expect = 2.5
Identities = 21/81 (25%), Positives = 35/81 (43%), Gaps = 2/81 (2%)
Frame = +1
Query: 208 EQLADVDALKPQINGDAHIHEQTAKEKELDSGTPENEKDATTEKEAIENSNEKEAGPVTN 387
EQ DV+ L ++ + T+KE D + EKE +E ++ E N
Sbjct: 6 EQTDDVETLMASLDQLGMEADPTSKEFNNDDSKIGAPSEVQDEKELLEFLDQLENDEEKN 65
Query: 388 GES--EQKAENGESVTTTPDD 444
++ E+ E ESV T ++
Sbjct: 66 EKNPIEEANEENESVAATSNE 86
>SPBC11C11.03 |ndc80|ndc10, tid3|spindle pole body protein
Ndc80|Schizosaccharomyces pombe|chr 2|||Manual
Length = 624
Score = 26.6 bits (56), Expect = 2.5
Identities = 12/47 (25%), Positives = 25/47 (53%)
Frame = +1
Query: 268 EQTAKEKELDSGTPENEKDATTEKEAIENSNEKEAGPVTNGESEQKA 408
E++ EKEL + + +D + EA++++NE+ + + E A
Sbjct: 251 EESEPEKELKATFNQQNQDLYNQTEALKSTNEELINQIKSAEELDSA 297
>SPBC365.13c |hba1|caf1|Ran GTPase binding protein
Hba1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 399
Score = 26.2 bits (55), Expect = 3.3
Identities = 19/56 (33%), Positives = 27/56 (48%), Gaps = 2/56 (3%)
Frame = +1
Query: 274 TAKEKELDSGTPEN--EKDATTEKEAIENSNEKEAGPVTNGESEQKAENGESVTTT 435
+ KEKE D + EN E A T +A EN + AG + E +G+S +T
Sbjct: 205 SGKEKENDKKSSENFDELLANTSAKAFEN-QKGSAGETKSEPKEADKGSGDSTKST 259
>SPCC569.07 |||aromatic aminotransferase |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 470
Score = 26.2 bits (55), Expect = 3.3
Identities = 12/34 (35%), Positives = 18/34 (52%)
Frame = +1
Query: 262 IHEQTAKEKELDSGTPENEKDATTEKEAIENSNE 363
IH+ + E++S + KDAT E N+NE
Sbjct: 53 IHKLSVSFPEVNSWEKDTNKDATVSYELSNNANE 86
>SPBC19F5.05c |ppp1|SPBC25D12.01c|pescadillo-family BRCT domain
protein|Schizosaccharomyces pombe|chr 2|||Manual
Length = 607
Score = 26.2 bits (55), Expect = 3.3
Identities = 15/48 (31%), Positives = 23/48 (47%)
Frame = +1
Query: 244 INGDAHIHEQTAKEKELDSGTPENEKDATTEKEAIENSNEKEAGPVTN 387
+N DA++ EQ+ K E PE E++ K A NE V++
Sbjct: 297 VNSDANVVEQSEKTTEDADEEPETEENLDEFKPADGADNEDSKSLVSH 344
>SPAC16A10.07c |taz1|myb1, myb|human TRF ortholog
Taz1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 663
Score = 26.2 bits (55), Expect = 3.3
Identities = 12/43 (27%), Positives = 25/43 (58%), Gaps = 1/43 (2%)
Frame = +1
Query: 310 ENEKDATTEKEAIENSNEK-EAGPVTNGESEQKAENGESVTTT 435
ENE D +KE ++NS+ E G +++ ++ E E+ +++
Sbjct: 15 ENEGDQQFDKEVVQNSDSNIETGQISDSLTKAVEERAETESSS 57
>SPBC16E9.10c |||AAA family ATPase Rix7 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 779
Score = 26.2 bits (55), Expect = 3.3
Identities = 14/42 (33%), Positives = 22/42 (52%)
Frame = +1
Query: 286 KELDSGTPENEKDATTEKEAIENSNEKEAGPVTNGESEQKAE 411
KE+D E+EK + ++ ++ K+ TNG QKAE
Sbjct: 124 KEIDG---EDEKKSVGQESITGSAKRKDRRSKTNGSKRQKAE 162
>SPAC6G9.12 |cfr1||Chs five related protein Cfr1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 620
Score = 25.4 bits (53), Expect = 5.8
Identities = 11/39 (28%), Positives = 23/39 (58%)
Frame = +1
Query: 313 NEKDATTEKEAIENSNEKEAGPVTNGESEQKAENGESVT 429
NE++ T E E +E+ E+ + ++++ +GE+VT
Sbjct: 426 NEENNTPETEGLEDEKEENNTAAESLINQEETTSGEAVT 464
>SPBC4F6.13c |||WD repeat/BOP1NT protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 736
Score = 25.0 bits (52), Expect = 7.6
Identities = 16/63 (25%), Positives = 25/63 (39%)
Frame = +1
Query: 220 DVDALKPQINGDAHIHEQTAKEKELDSGTPENEKDATTEKEAIENSNEKEAGPVTNGESE 399
DVD P + + E+ E TPE D + + E E +AG ++ +E
Sbjct: 50 DVDEEIPSLTAELSEEEEGEYSSESGRSTPELSPDDFEDADDEEEFEEIDAGYSSDSSTE 109
Query: 400 QKA 408
A
Sbjct: 110 DVA 112
>SPAPB17E12.10c |||SAM-dependent
methyltransferase|Schizosaccharomyces pombe|chr
1|||Manual
Length = 301
Score = 25.0 bits (52), Expect = 7.6
Identities = 14/39 (35%), Positives = 24/39 (61%)
Frame = -3
Query: 123 ALFSTHARKSFFNPIENNKGITLISAKRSLQAHTAQQQY 7
+LFS+ + + NP + K TLIS ++S A TA +++
Sbjct: 26 SLFSSCLLRFYSNPPKKTKKNTLISLRKS--AETANEKF 62
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.313 0.129 0.373
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,715,813
Number of Sequences: 5004
Number of extensions: 25397
Number of successful extensions: 90
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 85
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 90
length of database: 2,362,478
effective HSP length: 69
effective length of database: 2,017,202
effective search space used: 236012634
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
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