Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P01_F_K21
(616 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At4g26750.1 68417.m03854 hydroxyproline-rich glycoprotein family... 31 0.46
At2g38440.1 68415.m04721 expressed protein 31 0.61
At4g24020.1 68417.m03452 RWP-RK domain-containing protein simila... 30 1.4
At1g31750.1 68414.m03895 proline-rich family protein contains pr... 29 3.2
At2g01460.1 68415.m00069 phosphoribulokinase/uridine kinase fami... 28 5.7
At1g78240.1 68414.m09118 dehydration-responsive protein-related ... 28 5.7
At1g01440.1 68414.m00059 extra-large G-protein-related weak simi... 28 5.7
At2g46020.2 68415.m05725 transcription regulatory protein SNF2, ... 27 7.5
At2g46020.1 68415.m05724 transcription regulatory protein SNF2, ... 27 7.5
At5g45350.1 68418.m05567 proline-rich family protein contains pr... 27 9.9
At2g28340.1 68415.m03444 zinc finger (GATA type) family protein ... 27 9.9
At1g12130.1 68414.m01405 flavin-containing monooxygenase family ... 27 9.9
>At4g26750.1 68417.m03854 hydroxyproline-rich glycoprotein family
protein
Length = 421
Score = 31.5 bits (68), Expect = 0.46
Identities = 18/65 (27%), Positives = 26/65 (40%), Gaps = 3/65 (4%)
Frame = +1
Query: 160 YQYQPGPYPKTPEERAAAAKKYGMTVEEYTPYPEDM-GYGDYPKLPDIGEDSKDPHYP-- 330
+ Y PY + P + + Y + P P + + YP + S PHYP
Sbjct: 258 HPYSHQPYHQDPPKHMPPPQNYS----SHEPSPNSLPNFQSYPSFSESSLPSTSPHYPSH 313
Query: 331 YDNPE 345
Y NPE
Sbjct: 314 YQNPE 318
>At2g38440.1 68415.m04721 expressed protein
Length = 1399
Score = 31.1 bits (67), Expect = 0.61
Identities = 14/35 (40%), Positives = 21/35 (60%)
Frame = -1
Query: 334 HKDNEDPWSPHQYQVASDNHHSPYLQDREYTPLQS 230
H+D +D H+ Q +SD+HH P + + TP QS
Sbjct: 1204 HEDFKDDADVHESQSSSDDHHCP--ETKSLTPTQS 1236
>At4g24020.1 68417.m03452 RWP-RK domain-containing protein similar
to nodule inception protein [Lotus japonicus]
GI:6448579; contains Pfam profile: PF02042 RWP-RK domain
Length = 959
Score = 29.9 bits (64), Expect = 1.4
Identities = 17/62 (27%), Positives = 27/62 (43%)
Frame = +1
Query: 136 NATRNHWNYQYQPGPYPKTPEERAAAAKKYGMTVEEYTPYPEDMGYGDYPKLPDIGEDSK 315
N + NHW+ + P +PE + K TV+E P G D +L + ++
Sbjct: 697 NNSPNHWSSDHSPNEPNGSPELPPSNGHKRSRTVDESAGTPTSHGSCDGNQLDEPKVPNQ 756
Query: 316 DP 321
DP
Sbjct: 757 DP 758
>At1g31750.1 68414.m03895 proline-rich family protein contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 176
Score = 28.7 bits (61), Expect = 3.2
Identities = 16/49 (32%), Positives = 19/49 (38%)
Frame = +1
Query: 148 NHWNYQYQPGPYPKTPEERAAAAKKYGMTVEEYTPYPEDMGYGDYPKLP 294
NH + Y PG YP P+ A G + Y P P YP P
Sbjct: 18 NHHGHGYPPGAYPPPPQ--GAYPPPGGYPPQGYPPPPHGYPPAAYPPPP 64
>At2g01460.1 68415.m00069 phosphoribulokinase/uridine kinase family
protein contains Pfam profile PF00485:
Phosphoribulokinase / Uridine kinase family
Length = 723
Score = 27.9 bits (59), Expect = 5.7
Identities = 15/25 (60%), Positives = 19/25 (76%), Gaps = 2/25 (8%)
Frame = -2
Query: 423 PYANVTAI--STKYFCSSVQRFIEI 355
PY ++ +I STK FCSSVQ FI+I
Sbjct: 649 PYQDILSILDSTK-FCSSVQNFIDI 672
>At1g78240.1 68414.m09118 dehydration-responsive protein-related
similar to early-responsive to dehydration stress ERD3
protein [Arabidopsis thaliana] GI:15320410; contains
Pfam profile PF03141: Putative methyltransferase
Length = 684
Score = 27.9 bits (59), Expect = 5.7
Identities = 15/49 (30%), Positives = 23/49 (46%)
Frame = +1
Query: 181 YPKTPEERAAAAKKYGMTVEEYTPYPEDMGYGDYPKLPDIGEDSKDPHY 327
Y PE A+ + +TV EY + + D+PK P G++ P Y
Sbjct: 483 YGLHPEVLGEDAENWKITVREYWSLLSPLIFSDHPKRP--GDEDPSPPY 529
>At1g01440.1 68414.m00059 extra-large G-protein-related weak
similarity to extra-large G-protein (AtXLG1)
(GI:3201682) [Arabidopsis thaliana]
Length = 664
Score = 27.9 bits (59), Expect = 5.7
Identities = 16/41 (39%), Positives = 18/41 (43%), Gaps = 1/41 (2%)
Frame = +1
Query: 223 YGMTVEEYTPYPEDMGYGDYPKLPDIGEDSKDPHYP-YDNP 342
+G Y PYPE YG YP S PH P Y +P
Sbjct: 121 HGPPPSYYNPYPEPFPYGMYPTA------SNQPHVPAYRDP 155
>At2g46020.2 68415.m05725 transcription regulatory protein SNF2,
putative similar to SP|P22082 Transcription regulatory
protein SNF2 (SWI/SNF complex component SNF2)
{Saccharomyces cerevisiae}; contains Pfam profiles
PF00271: Helicase conserved C-terminal domain, PF00176:
SNF2 family N-terminal domain
Length = 2193
Score = 27.5 bits (58), Expect = 7.5
Identities = 13/32 (40%), Positives = 15/32 (46%)
Frame = +1
Query: 166 YQPGPYPKTPEERAAAAKKYGMTVEEYTPYPE 261
Y P P PK E+ A A + G T E Y E
Sbjct: 1402 YDPDPNPKNEEQAVARAHRIGQTREVKVIYME 1433
>At2g46020.1 68415.m05724 transcription regulatory protein SNF2,
putative similar to SP|P22082 Transcription regulatory
protein SNF2 (SWI/SNF complex component SNF2)
{Saccharomyces cerevisiae}; contains Pfam profiles
PF00271: Helicase conserved C-terminal domain, PF00176:
SNF2 family N-terminal domain
Length = 2192
Score = 27.5 bits (58), Expect = 7.5
Identities = 13/32 (40%), Positives = 15/32 (46%)
Frame = +1
Query: 166 YQPGPYPKTPEERAAAAKKYGMTVEEYTPYPE 261
Y P P PK E+ A A + G T E Y E
Sbjct: 1401 YDPDPNPKNEEQAVARAHRIGQTREVKVIYME 1432
>At5g45350.1 68418.m05567 proline-rich family protein contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 177
Score = 27.1 bits (57), Expect = 9.9
Identities = 17/46 (36%), Positives = 17/46 (36%)
Frame = +1
Query: 166 YQPGPYPKTPEERAAAAKKYGMTVEEYTPYPEDMGYGDYPKLPDIG 303
Y PG YP P A Y YP GYG YP P G
Sbjct: 49 YPPGAYPPAPGGYPPAPG--------YGGYPPAPGYGGYPPAPGHG 86
>At2g28340.1 68415.m03444 zinc finger (GATA type) family protein
and genefinder
Length = 315
Score = 27.1 bits (57), Expect = 9.9
Identities = 17/48 (35%), Positives = 24/48 (50%), Gaps = 1/48 (2%)
Frame = +3
Query: 75 TEKSSVQQLSIHKKNGSSVLQC-H*ESLELPVPTWSLS*NTRRTGCSS 215
+E S + L KKN S L+C H E+ P W N R+T C++
Sbjct: 196 SESSEISALKKRKKNKSRRLKCTHCET--TTTPQWREGPNGRKTLCNA 241
>At1g12130.1 68414.m01405 flavin-containing monooxygenase family
protein / FMO family protein contains similarity to
flavin-containing monooxygenase 2 (FMO2) from Homo
sapiens [GI:1834493]; contains Pfam profile PF00743
Flavin-binding monooxygenase-like
Length = 470
Score = 27.1 bits (57), Expect = 9.9
Identities = 12/32 (37%), Positives = 19/32 (59%)
Frame = +1
Query: 259 EDMGYGDYPKLPDIGEDSKDPHYPYDNPELKR 354
E MGY D+P + ++S+DP D+ E+ R
Sbjct: 84 ECMGYSDFPFVTRPDDESRDPRRYPDHREVMR 115
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,352,544
Number of Sequences: 28952
Number of extensions: 285258
Number of successful extensions: 822
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 800
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 821
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1236350304
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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