Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P01_F_K20
         (583 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_01_0091 + 646299-649082                                             31   0.89 
05_07_0028 + 27153663-27153932,27154966-27155175,27156220-271564...    30   1.2  
10_08_0655 - 19621717-19622594,19623186-19623227,19624323-196244...    29   2.0  
09_06_0180 - 21385655-21386017,21386399-21386623,21386859-21387305     28   4.7  
01_03_0013 + 11645786-11645853,11646674-11646802,11646906-116469...    28   4.7  

>02_01_0091 + 646299-649082
          Length = 927

 Score = 30.7 bits (66), Expect = 0.89
 Identities = 17/43 (39%), Positives = 20/43 (46%)
 Frame = -1

Query: 142 CRVSIFRTRFLEQALTGCESHQRHEQKHDEVMFGGXXNDVLRT 14
           C+V     + LEQ L    S     Q+HDE  FG   N VL T
Sbjct: 560 CQVDSQNRKVLEQHLACAASEYPLRQEHDESYFGFSMNSVLMT 602


>05_07_0028 +
           27153663-27153932,27154966-27155175,27156220-27156414,
           27156491-27156840,27157198-27157423,27157524-27157692,
           27158145-27158990,27159647-27159818,27159934-27160052,
           27160117-27160155,27161033-27161157,27161250-27161309,
           27161471-27161542,27161980-27162114
          Length = 995

 Score = 30.3 bits (65), Expect = 1.2
 Identities = 20/64 (31%), Positives = 26/64 (40%)
 Frame = +2

Query: 5   RPMSSQHIVXXAAKHYFIMFLLVSLMALAASKSLFEKSCPENAHTTLNPCVPTCADPELK 184
           R +S    +    K Y I  L+ S    A  KS   +S   N  T L  C P+  DPE +
Sbjct: 790 RKVSRDSTLDPRRKAYLIQNLMTSRWIAAQQKSPQPQSEDRNGCTVLPGCCPSYRDPENQ 849

Query: 185 HTSC 196
              C
Sbjct: 850 IFGC 853


>10_08_0655 -
           19621717-19622594,19623186-19623227,19624323-19624479,
           19625333-19625405,19625483-19625595
          Length = 420

 Score = 29.5 bits (63), Expect = 2.0
 Identities = 13/39 (33%), Positives = 19/39 (48%)
 Frame = +2

Query: 74  SLMALAASKSLFEKSCPENAHTTLNPCVPTCADPELKHT 190
           S +AL+ SK + E + PE     L  C+     P  +HT
Sbjct: 260 STVALSVSKVMGEDAKPETVSEALTACIEETCSPAYRHT 298


>09_06_0180 - 21385655-21386017,21386399-21386623,21386859-21387305
          Length = 344

 Score = 28.3 bits (60), Expect = 4.7
 Identities = 16/43 (37%), Positives = 21/43 (48%), Gaps = 1/43 (2%)
 Frame = -1

Query: 274 GNGHAFSLRVEEVSRITVAGCDESRHATGVFQFR-VCTGRHAG 149
           GNG AF  + + V R+TV           +  F  VC GRH+G
Sbjct: 123 GNGEAFGAQKDGVWRLTVKDLKIGNIEVFLVDFLIVCIGRHSG 165


>01_03_0013 +
           11645786-11645853,11646674-11646802,11646906-11646945,
           11647075-11647191
          Length = 117

 Score = 28.3 bits (60), Expect = 4.7
 Identities = 12/36 (33%), Positives = 18/36 (50%)
 Frame = -2

Query: 306 LK*PPRHIQHSATGTHFPSELKRYPESQWQVAMKAV 199
           LK   R +       HF  E  RYP S+W++ + A+
Sbjct: 38  LKVEERSVVEQGAEGHFGGEASRYPFSRWRLGLAAL 73


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,236,601
Number of Sequences: 37544
Number of extensions: 283548
Number of successful extensions: 595
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 583
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 595
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1364465340
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)