Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P01_F_K17
(546 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P36241 Cluster: 60S ribosomal protein L19; n=141; Eukar... 205 4e-52
UniRef50_P84098 Cluster: 60S ribosomal protein L19; n=53; Eukary... 182 6e-45
UniRef50_Q95L19 Cluster: Ribosomal protein L19; n=4; Eukaryota|R... 179 3e-44
UniRef50_Q5DEB4 Cluster: Ribosomal protein L19; n=6; Eukaryota|R... 158 9e-38
UniRef50_Q4QJ39 Cluster: 60S ribosomal protein L19, putative; n=... 141 8e-33
UniRef50_Q014R4 Cluster: Ribosomal protein L19; n=2; Eukaryota|R... 129 5e-29
UniRef50_UPI0000DA4672 Cluster: PREDICTED: similar to ribosomal ... 122 4e-27
UniRef50_Q98RT9 Cluster: 60S ribosomal protein L19; n=1; Guillar... 113 3e-24
UniRef50_Q7QT85 Cluster: Ribosomal protein L19; n=1; Giardia lam... 107 1e-22
UniRef50_Q6QI82 Cluster: LRRGT00126; n=3; Rattus norvegicus|Rep:... 97 2e-19
UniRef50_Q8SRP5 Cluster: 60S RIBOSOMAL PROTEIN L19; n=1; Encepha... 94 2e-18
UniRef50_Q9V1V3 Cluster: 50S ribosomal protein L19e; n=6; Archae... 91 2e-17
UniRef50_P54043 Cluster: 50S ribosomal protein L19e; n=12; Eurya... 79 5e-14
UniRef50_Q74N10 Cluster: Ribosomal protein L19; n=3; Archaea|Rep... 75 1e-12
UniRef50_UPI0001552F33 Cluster: PREDICTED: hypothetical protein;... 55 2e-11
UniRef50_Q7QT86 Cluster: GLP_72_19704_20255; n=1; Giardia lambli... 65 9e-10
UniRef50_Q673R0 Cluster: Ribosomal protein L19; n=2; environment... 62 1e-08
UniRef50_Q9YF93 Cluster: 50S ribosomal protein L19e; n=2; Desulf... 60 2e-08
UniRef50_Q6QI77 Cluster: LRRG00131; n=1; Rattus norvegicus|Rep: ... 59 6e-08
UniRef50_A3H8Q7 Cluster: Ribosomal protein L19e; n=1; Caldivirga... 56 7e-07
UniRef50_Q6L1A9 Cluster: Large subunit ribosomal protein L19E; n... 55 9e-07
UniRef50_Q680Q9 Cluster: Ribosomal protein L19; n=3; Arabidopsis... 54 2e-06
UniRef50_Q6QI84 Cluster: LRRG00124; n=5; Eukaryota|Rep: LRRG0012... 54 3e-06
UniRef50_Q6X9Y8 Cluster: Ribosomal protein L19; n=1; Equus cabal... 53 4e-06
UniRef50_UPI00005A22A8 Cluster: PREDICTED: similar to ribosomal ... 53 5e-06
UniRef50_Q9UX89 Cluster: 50S ribosomal protein L19e; n=4; Sulfol... 51 2e-05
UniRef50_Q8ZVV8 Cluster: Ribosomal protein L19; n=4; Pyrobaculum... 51 2e-05
UniRef50_Q3LVV0 Cluster: Ribosomal protein L19; n=1; Bigelowiell... 43 0.004
UniRef50_A7DRM7 Cluster: Ribosomal protein L19e; n=1; Candidatus... 41 0.016
UniRef50_A0RUF8 Cluster: Ribosomal protein L19E; n=1; Cenarchaeu... 40 0.028
UniRef50_Q8TM93 Cluster: O-methyltransferase; n=3; Methanomicrob... 33 3.3
UniRef50_A7Q820 Cluster: Chromosome undetermined scaffold_62, wh... 33 4.3
UniRef50_A2YPT1 Cluster: Putative uncharacterized protein; n=3; ... 33 4.3
UniRef50_Q8DFA7 Cluster: Flagellar motor protein MotB; n=31; Gam... 33 5.7
UniRef50_A3QGM1 Cluster: Tetratricopeptide TPR_2 repeat protein ... 33 5.7
UniRef50_A6RYJ9 Cluster: Predicted protein; n=1; Botryotinia fuc... 33 5.7
UniRef50_A7HD11 Cluster: Polysulphide reductase NrfD; n=2; Anaer... 32 7.5
>UniRef50_P36241 Cluster: 60S ribosomal protein L19; n=141;
Eukaryota|Rep: 60S ribosomal protein L19 - Drosophila
melanogaster (Fruit fly)
Length = 203
Score = 205 bits (501), Expect = 4e-52
Identities = 102/167 (61%), Positives = 111/167 (66%)
Frame = +3
Query: 12 LANTNSXQNIRKLIKDGLVIKXPVAVHSRARVRKNTEARRKGRHCGFGKRRGTANARMPQ 191
+ANTNS QNIRKLIKDGL+IK PV VHSR RVRKNTEARRKGRHCGFGKR+GTANARMP
Sbjct: 32 IANTNSRQNIRKLIKDGLIIKKPVVVHSRYRVRKNTEARRKGRHCGFGKRKGTANARMPT 91
Query: 192 KELWXXXXXXXXXXXXXXXTAKKIDRHLYHSLYMKAKGNVFKNKRVLMEYIHRKKAEKAR 371
K LW +KKIDRHLYH LYMK KGNVFKNKRVLMEYIH+KKAEK R
Sbjct: 92 KLLWMQRQRVLRRLLKKYRDSKKIDRHLYHDLYMKCKGNVFKNKRVLMEYIHKKKAEKQR 151
Query: 372 TKMLSDQXXXXXXXXXXXXXXXXXXXXXXXXXLLQTFAREDEAALTA 512
+KML+DQ L+ A+EDE A A
Sbjct: 152 SKMLADQAEARRQKVREARKRREERIATKKQELIALHAKEDEIAAKA 198
>UniRef50_P84098 Cluster: 60S ribosomal protein L19; n=53;
Eukaryota|Rep: 60S ribosomal protein L19 - Homo sapiens
(Human)
Length = 196
Score = 182 bits (442), Expect = 6e-45
Identities = 86/162 (53%), Positives = 106/162 (65%)
Frame = +3
Query: 12 LANTNSXQNIRKLIKDGLVIKXPVAVHSRARVRKNTEARRKGRHCGFGKRRGTANARMPQ 191
+AN NS Q IRKLIKDGL+I+ PV VHSRAR RKNT ARRKGRH G GKR+GTANARMP+
Sbjct: 32 IANANSRQQIRKLIKDGLIIRKPVTVHSRARCRKNTLARRKGRHMGIGKRKGTANARMPE 91
Query: 192 KELWXXXXXXXXXXXXXXXTAKKIDRHLYHSLYMKAKGNVFKNKRVLMEYIHRKKAEKAR 371
K W +KKIDRH+YHSLY+K KGNVFKNKR+LME+IH+ KA+KAR
Sbjct: 92 KVTWMRRMRILRRLLRRYRESKKIDRHMYHSLYLKVKGNVFKNKRILMEHIHKLKADKAR 151
Query: 372 TKMLSDQXXXXXXXXXXXXXXXXXXXXXXXXXLLQTFAREDE 497
K+L+DQ +++T ++E+E
Sbjct: 152 KKLLADQAEARRSKTKEARKRREERLQAKKEEIIKTLSKEEE 193
>UniRef50_Q95L19 Cluster: Ribosomal protein L19; n=4; Eukaryota|Rep:
Ribosomal protein L19 - Sus scrofa (Pig)
Length = 153
Score = 179 bits (436), Expect = 3e-44
Identities = 83/127 (65%), Positives = 97/127 (76%)
Frame = +3
Query: 12 LANTNSXQNIRKLIKDGLVIKXPVAVHSRARVRKNTEARRKGRHCGFGKRRGTANARMPQ 191
+AN NS Q IRKLIKDGL+I+ PV VHSRAR RKNT ARRKGRH G GKR+GTANARMP+
Sbjct: 24 IANANSRQQIRKLIKDGLIIRKPVTVHSRARCRKNTLARRKGRHMGIGKRKGTANARMPE 83
Query: 192 KELWXXXXXXXXXXXXXXXTAKKIDRHLYHSLYMKAKGNVFKNKRVLMEYIHRKKAEKAR 371
K W +KKIDRH+YHSLY+K KGNVFKNKR+LME+IH+ KA+KAR
Sbjct: 84 KVTWMRRMRILRRLLRRYRESKKIDRHMYHSLYLKVKGNVFKNKRILMEHIHKLKADKAR 143
Query: 372 TKMLSDQ 392
K+L+DQ
Sbjct: 144 KKLLADQ 150
>UniRef50_Q5DEB4 Cluster: Ribosomal protein L19; n=6; Eukaryota|Rep:
Ribosomal protein L19 - Schistosoma japonicum (Blood
fluke)
Length = 287
Score = 158 bits (383), Expect = 9e-38
Identities = 75/128 (58%), Positives = 90/128 (70%)
Frame = +3
Query: 9 SLANTNSXQNIRKLIKDGLVIKXPVAVHSRARVRKNTEARRKGRHCGFGKRRGTANARMP 188
++ N NS + IRKL KD L+I+ PV VHSR+R RKN ARRKGRH G GKR+GTA+ARMP
Sbjct: 31 TIQNANSRKMIRKLYKDNLIIRKPVTVHSRSRCRKNLIARRKGRHTGTGKRKGTADARMP 90
Query: 189 QKELWXXXXXXXXXXXXXXXTAKKIDRHLYHSLYMKAKGNVFKNKRVLMEYIHRKKAEKA 368
QK LW A KID+HLYH LY + KGN FKNKRVL+++IH+KKAE+
Sbjct: 91 QKVLWMRRMRVLRRLLKRYREAHKIDKHLYHLLYQQCKGNQFKNKRVLIDHIHKKKAERL 150
Query: 369 RTKMLSDQ 392
R K LSDQ
Sbjct: 151 RAKQLSDQ 158
>UniRef50_Q4QJ39 Cluster: 60S ribosomal protein L19, putative; n=16;
cellular organisms|Rep: 60S ribosomal protein L19,
putative - Leishmania major
Length = 267
Score = 141 bits (342), Expect = 8e-33
Identities = 66/130 (50%), Positives = 87/130 (66%)
Frame = +3
Query: 3 SMSLANTNSXQNIRKLIKDGLVIKXPVAVHSRARVRKNTEARRKGRHCGFGKRRGTANAR 182
++ + N NS +++RKLIKDG +I+ PV VHSRAR RK EA+ GRH G G+R G+ AR
Sbjct: 49 AVEIQNANSRKSVRKLIKDGFIIRKPVKVHSRARWRKMKEAKDMGRHNGVGRREGSREAR 108
Query: 183 MPQKELWXXXXXXXXXXXXXXXTAKKIDRHLYHSLYMKAKGNVFKNKRVLMEYIHRKKAE 362
MP KELW KKIDRH+Y LYM+AKGNVF+NKR L+E+IH+ K E
Sbjct: 109 MPSKELWMRRLRILRRLLRKYRADKKIDRHVYRDLYMRAKGNVFRNKRNLVEHIHKIKNE 168
Query: 363 KARTKMLSDQ 392
K + + L++Q
Sbjct: 169 KKKERQLAEQ 178
>UniRef50_Q014R4 Cluster: Ribosomal protein L19; n=2; Eukaryota|Rep:
Ribosomal protein L19 - Ostreococcus tauri
Length = 213
Score = 129 bits (311), Expect = 5e-29
Identities = 59/102 (57%), Positives = 70/102 (68%)
Frame = +3
Query: 87 VHSRARVRKNTEARRKGRHCGFGKRRGTANARMPQKELWXXXXXXXXXXXXXXXTAKKID 266
+HSRAR + A+R GRH G+GKRRGT AR+P K LW AKKID
Sbjct: 77 IHSRARTAREQAAKRLGRHTGYGKRRGTREARLPTKVLWLRRHRVLRRLLSKYRDAKKID 136
Query: 267 RHLYHSLYMKAKGNVFKNKRVLMEYIHRKKAEKARTKMLSDQ 392
+H+YHS+Y+K KGNVFKNKRVLME IH+ KAEKAR K L+DQ
Sbjct: 137 KHMYHSMYLKCKGNVFKNKRVLMEAIHKSKAEKAREKSLADQ 178
>UniRef50_UPI0000DA4672 Cluster: PREDICTED: similar to ribosomal
protein L19; n=2; Rattus norvegicus|Rep: PREDICTED:
similar to ribosomal protein L19 - Rattus norvegicus
Length = 303
Score = 122 bits (295), Expect = 4e-27
Identities = 63/127 (49%), Positives = 81/127 (63%)
Frame = +3
Query: 12 LANTNSXQNIRKLIKDGLVIKXPVAVHSRARVRKNTEARRKGRHCGFGKRRGTANARMPQ 191
+AN NS Q IRKLI+DGL+I PV VHS+A KNT KGRH GK +GTAN +P+
Sbjct: 32 IANANSCQLIRKLIEDGLIIWKPVTVHSQAHCEKNT---LKGRHMVIGKGKGTANIWVPE 88
Query: 192 KELWXXXXXXXXXXXXXXXTAKKIDRHLYHSLYMKAKGNVFKNKRVLMEYIHRKKAEKAR 371
+ W +KKID H+ HSLY++ K NVFKN+ +LME IH+ KA+KA
Sbjct: 89 RVTWMRRMSILHRLLRRYCESKKIDCHMCHSLYLRVKRNVFKNQWILMEQIHKPKADKAC 148
Query: 372 TKMLSDQ 392
K+L+DQ
Sbjct: 149 KKLLADQ 155
>UniRef50_Q98RT9 Cluster: 60S ribosomal protein L19; n=1; Guillardia
theta|Rep: 60S ribosomal protein L19 - Guillardia theta
(Cryptomonas phi)
Length = 190
Score = 113 bits (271), Expect = 3e-24
Identities = 53/124 (42%), Positives = 76/124 (61%)
Frame = +3
Query: 21 TNSXQNIRKLIKDGLVIKXPVAVHSRARVRKNTEARRKGRHCGFGKRRGTANARMPQKEL 200
T+S +IRKLI+DG ++K HSR R+R E + GRH G GKR+G+ N+R K +
Sbjct: 35 TDSRNSIRKLIRDGFILKKKDKNHSRNRIRSRKEEIKLGRHEGLGKRKGSKNSRYSIKLI 94
Query: 201 WXXXXXXXXXXXXXXXTAKKIDRHLYHSLYMKAKGNVFKNKRVLMEYIHRKKAEKARTKM 380
W + K++RHLY SLY+K+KGNVFKNK++L E+IH+ K E+ R +
Sbjct: 95 WIIRIRVMRNLLKRLRNSSKLNRHLYRSLYLKSKGNVFKNKKILTEFIHKAKNEQKRKEE 154
Query: 381 LSDQ 392
D+
Sbjct: 155 FLDK 158
>UniRef50_Q7QT85 Cluster: Ribosomal protein L19; n=1; Giardia
lamblia ATCC 50803|Rep: Ribosomal protein L19 - Giardia
lamblia ATCC 50803
Length = 196
Score = 107 bits (258), Expect = 1e-22
Identities = 54/127 (42%), Positives = 72/127 (56%)
Frame = +3
Query: 12 LANTNSXQNIRKLIKDGLVIKXPVAVHSRARVRKNTEARRKGRHCGFGKRRGTANARMPQ 191
+ +S + IR LI+ ++ K + SR R+R A+R GRH G GKRRGT ARMP
Sbjct: 32 IEQASSREAIRSLIESKIIAKLDIKGSSRGRIRARHAAKRLGRHSGHGKRRGTREARMPS 91
Query: 192 KELWXXXXXXXXXXXXXXXTAKKIDRHLYHSLYMKAKGNVFKNKRVLMEYIHRKKAEKAR 371
K LW +KIDRHLY +LY KAKGN+FKNKRVL+E+I + E+
Sbjct: 92 KTLWIQRQRVLRRLLSRYRDDEKIDRHLYETLYAKAKGNMFKNKRVLLEHIVGMQKEQEL 151
Query: 372 TKMLSDQ 392
K ++
Sbjct: 152 EKKKKEE 158
>UniRef50_Q6QI82 Cluster: LRRGT00126; n=3; Rattus norvegicus|Rep:
LRRGT00126 - Rattus norvegicus (Rat)
Length = 632
Score = 97.5 bits (232), Expect = 2e-19
Identities = 48/111 (43%), Positives = 67/111 (60%)
Frame = +3
Query: 60 GLVIKXPVAVHSRARVRKNTEARRKGRHCGFGKRRGTANARMPQKELWXXXXXXXXXXXX 239
GL+I+ PV VHS +R+ +G+ G + GTANARM +K W
Sbjct: 503 GLIIRKPVTVHSPGSLREKHLGLMEGQAYGHREEEGTANARMSEKLTWMRRMRILHRLLR 562
Query: 240 XXXTAKKIDRHLYHSLYMKAKGNVFKNKRVLMEYIHRKKAEKARTKMLSDQ 392
+KKIDR +YHSL +K KGNVFKNK L+++IH+ KA++A K+L+DQ
Sbjct: 563 RYRESKKIDRRMYHSLDLKVKGNVFKNKWSLVDHIHKLKADRAPKKLLADQ 613
>UniRef50_Q8SRP5 Cluster: 60S RIBOSOMAL PROTEIN L19; n=1;
Encephalitozoon cuniculi|Rep: 60S RIBOSOMAL PROTEIN L19
- Encephalitozoon cuniculi
Length = 171
Score = 93.9 bits (223), Expect = 2e-18
Identities = 47/127 (37%), Positives = 74/127 (58%)
Frame = +3
Query: 12 LANTNSXQNIRKLIKDGLVIKXPVAVHSRARVRKNTEARRKGRHCGFGKRRGTANARMPQ 191
L ++ + I++LIKD ++I SR R RK EA++KGRH G GKR GTANARMPQ
Sbjct: 32 LNGASTREQIKQLIKDNVIIMKQDKHTSRGRCRKRLEAKKKGRHMGTGKRFGTANARMPQ 91
Query: 192 KELWXXXXXXXXXXXXXXXTAKKIDRHLYHSLYMKAKGNVFKNKRVLMEYIHRKKAEKAR 371
K++W +I + + Y +AKG++FK++ + + I ++KA++ R
Sbjct: 92 KKIWMKKIRAMRAMLKEMRANGEITKEDFRVFYKQAKGHLFKHRFHMKDCIIKRKADEQR 151
Query: 372 TKMLSDQ 392
K L++Q
Sbjct: 152 AKELAEQ 158
>UniRef50_Q9V1V3 Cluster: 50S ribosomal protein L19e; n=6;
Archaea|Rep: 50S ribosomal protein L19e - Pyrococcus
abyssi
Length = 151
Score = 90.6 bits (215), Expect = 2e-17
Identities = 47/120 (39%), Positives = 65/120 (54%)
Frame = +3
Query: 12 LANTNSXQNIRKLIKDGLVIKXPVAVHSRARVRKNTEARRKGRHCGFGKRRGTANARMPQ 191
+A+ + ++IR+LIK+G++ K PV SR R R E ++KGRH G G R+G ARM +
Sbjct: 32 VASAITREDIRRLIKEGVIKKKPVKGQSRYRARIRHEQKKKGRHRGPGSRKGKKTARMGK 91
Query: 192 KELWXXXXXXXXXXXXXXXTAKKIDRHLYHSLYMKAKGNVFKNKRVLMEYIHRKKAEKAR 371
KELW KKIDR Y LY++AKG FK+K L ++ K R
Sbjct: 92 KELWIKTIRALRKELRKLKEQKKIDRRTYRMLYIRAKGGQFKSKHQLYMFLEEHNLLKKR 151
>UniRef50_P54043 Cluster: 50S ribosomal protein L19e; n=12;
Euryarchaeota|Rep: 50S ribosomal protein L19e -
Methanococcus jannaschii
Length = 151
Score = 79.4 bits (187), Expect = 5e-14
Identities = 44/113 (38%), Positives = 57/113 (50%)
Frame = +3
Query: 27 SXQNIRKLIKDGLVIKXPVAVHSRARVRKNTEARRKGRHCGFGKRRGTANARMPQKELWX 206
S +IR LIK+G++ K S ARV+K E R+KGR G G RRG A AR P KE W
Sbjct: 39 SKDDIRALIKEGVIKKKQKKGISSARVKKLKEQRKKGRRRGPGSRRGAAGARTPPKERWM 98
Query: 207 XXXXXXXXXXXXXXTAKKIDRHLYHSLYMKAKGNVFKNKRVLMEYIHRKKAEK 365
+ KIDR +Y LY AKG F+++ L Y+ + K
Sbjct: 99 ATIRALRKTLKQLRDSGKIDRKVYRKLYRMAKGGAFRSRSHLFLYMREHELLK 151
>UniRef50_Q74N10 Cluster: Ribosomal protein L19; n=3; Archaea|Rep:
Ribosomal protein L19 - Nanoarchaeum equitans
Length = 147
Score = 74.5 bits (175), Expect = 1e-12
Identities = 40/114 (35%), Positives = 57/114 (50%)
Frame = +3
Query: 12 LANTNSXQNIRKLIKDGLVIKXPVAVHSRARVRKNTEARRKGRHCGFGKRRGTANARMPQ 191
+A + +IR+LIK G++ K P+ SR R R+ E ++KGR G G R+G AR
Sbjct: 31 VAEALTKDDIRELIKRGIIKKLPIEGQSRKRARELHEKKKKGRRRGPGSRKGKRTARADP 90
Query: 192 KELWXXXXXXXXXXXXXXXTAKKIDRHLYHSLYMKAKGNVFKNKRVLMEYIHRK 353
K W K ID Y LY K KGN+FK++ L+ Y+ +K
Sbjct: 91 KRQWINKVRAQRKLLKELKEKKIIDNKTYWDLYKKVKGNLFKSRSHLLLYLKQK 144
>UniRef50_UPI0001552F33 Cluster: PREDICTED: hypothetical protein;
n=1; Mus musculus|Rep: PREDICTED: hypothetical protein -
Mus musculus
Length = 183
Score = 55.2 bits (127), Expect(2) = 2e-11
Identities = 26/46 (56%), Positives = 34/46 (73%), Gaps = 2/46 (4%)
Frame = +3
Query: 261 IDRHLYHSLYMKAKGNVFK--NKRVLMEYIHRKKAEKARTKMLSDQ 392
ID HLY SLY+K KGNV K +KR+ E+I + KA+ A+ K+LSDQ
Sbjct: 108 IDYHLYRSLYLKVKGNVLKTIDKRIFKEHIRKLKADSAQQKLLSDQ 153
Score = 35.9 bits (79), Expect(2) = 2e-11
Identities = 22/51 (43%), Positives = 29/51 (56%)
Frame = +3
Query: 18 NTNSXQNIRKLIKDGLVIKXPVAVHSRARVRKNTEARRKGRHCGFGKRRGT 170
N +S Q IRKL +DGL+I+ + T ARR+G H G KR+GT
Sbjct: 68 NASSCQQIRKLSEDGLIIQ-----------KSATLARRRGWHMGIRKRKGT 107
>UniRef50_Q7QT86 Cluster: GLP_72_19704_20255; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_72_19704_20255 - Giardia lamblia
ATCC 50803
Length = 183
Score = 65.3 bits (152), Expect = 9e-10
Identities = 41/106 (38%), Positives = 62/106 (58%)
Frame = -2
Query: 458 LGGNTFLAALACLLYFIAAGLSLVAKHLRPGLLSLLPVDVLHEHTLVLEHITLRLHVE*V 279
+GGN + LA LL +AA L L+ L LL L DVL E+ L+LEH+TL L +E +
Sbjct: 51 VGGNLLCSLLASLLCLLAALLKLLLLLLLELLLLLHSNDVLQENALILEHVTLSLSIEGL 110
Query: 278 V*MPVNLLGSSVLQEQFS*NPLSLYP*FLLWHTRIGSTSSLTKATV 141
+ +P++L +V +Q + + L+L P L HT + T++LT V
Sbjct: 111 IKVPIDLFVVTVPAQQATEDTLALNPESLRRHTSLPGTAALTVTAV 156
>UniRef50_Q673R0 Cluster: Ribosomal protein L19; n=2; environmental
samples|Rep: Ribosomal protein L19 - uncultured marine
group II euryarchaeote DeepAnt-JyKC7
Length = 158
Score = 61.7 bits (143), Expect = 1e-08
Identities = 31/96 (32%), Positives = 46/96 (47%)
Frame = +3
Query: 33 QNIRKLIKDGLVIKXPVAVHSRARVRKNTEARRKGRHCGFGKRRGTANARMPQKELWXXX 212
+++R+LI +G++ P SR+R RK + KGR G G R+G+ANAR P+K W
Sbjct: 44 EDVRRLIDEGVIKARPFVGTSRSRARKAAAQKAKGRRSGQGSRKGSANARNPRKSRWMRT 103
Query: 213 XXXXXXXXXXXXTAKKIDRHLYHSLYMKAKGNVFKN 320
I Y Y KAKG +++
Sbjct: 104 IRAQRKELKGMREDDSISSSEYRYYYRKAKGGSYRS 139
>UniRef50_Q9YF93 Cluster: 50S ribosomal protein L19e; n=2;
Desulfurococcaceae|Rep: 50S ribosomal protein L19e -
Aeropyrum pernix
Length = 155
Score = 60.5 bits (140), Expect = 2e-08
Identities = 34/103 (33%), Positives = 48/103 (46%)
Frame = +3
Query: 36 NIRKLIKDGLVIKXPVAVHSRARVRKNTEARRKGRHCGFGKRRGTANARMPQKELWXXXX 215
++R LIK G++ P ++ + RRKGR G G+R+G A AR+ KE W
Sbjct: 41 DVRALIKRGVIKVLPEKGNAGHASKVRHLQRRKGRRRGMGRRKGVATARLDPKERWMHRI 100
Query: 216 XXXXXXXXXXXTAKKIDRHLYHSLYMKAKGNVFKNKRVLMEYI 344
+ IDR Y LYM AKG F++ L Y+
Sbjct: 101 RKIRRYLRYLRDKQVIDRKTYRRLYMLAKGGTFRDLASLKRYM 143
>UniRef50_Q6QI77 Cluster: LRRG00131; n=1; Rattus norvegicus|Rep:
LRRG00131 - Rattus norvegicus (Rat)
Length = 180
Score = 59.3 bits (137), Expect = 6e-08
Identities = 39/117 (33%), Positives = 61/117 (52%)
Frame = -2
Query: 368 GLLSLLPVDVLHEHTLVLEHITLRLHVE*VV*MPVNLLGSSVLQEQFS*NPLSLYP*FLL 189
G+ LL + +L E + L + V+ V+ V LL V E+ NP +P LL
Sbjct: 43 GMDHLLVITLLAPGNAFYEKLFLHMQVQAVIRTIVTLLRFLVSPEKPVQNPHPSHPGPLL 102
Query: 188 WHTRIGSTSSLTKATVTTLSTCLCVFADTGAGVDCYRXLDDETILDQLTDVLXGVGV 18
+ +GST L A + L + VF+ G+D ++ LDD+ I DQ++D+L GVG+
Sbjct: 103 GYQNVGSTLPLPYAHMPALPSSQGVFSVVSPGMDGHKILDDQRIFDQISDLLMGVGI 159
>UniRef50_A3H8Q7 Cluster: Ribosomal protein L19e; n=1; Caldivirga
maquilingensis IC-167|Rep: Ribosomal protein L19e -
Caldivirga maquilingensis IC-167
Length = 158
Score = 55.6 bits (128), Expect = 7e-07
Identities = 35/104 (33%), Positives = 49/104 (47%), Gaps = 1/104 (0%)
Frame = +3
Query: 36 NIRKLIKDGLVIKXPVAVHSRARVRKNTEARRKGRHCGFGKRRGTANAR-MPQKELWXXX 212
++R L+K+GL+ P +SR R R E R+ GR G G RRGT AR KE+W
Sbjct: 36 DVRSLMKEGLIEVKPRKRNSRGRWRITHEKRKSGRRRGRGSRRGTRKARGAVGKEVWVPR 95
Query: 213 XXXXXXXXXXXXTAKKIDRHLYHSLYMKAKGNVFKNKRVLMEYI 344
ID+ + +LY AKG F++ L Y+
Sbjct: 96 IRRIRRFLNTLKHRGVIDKATWRNLYRMAKGGYFESLAHLRTYM 139
>UniRef50_Q6L1A9 Cluster: Large subunit ribosomal protein L19E; n=4;
Thermoplasmatales|Rep: Large subunit ribosomal protein
L19E - Picrophilus torridus
Length = 158
Score = 55.2 bits (127), Expect = 9e-07
Identities = 33/109 (30%), Positives = 47/109 (43%)
Frame = +3
Query: 18 NTNSXQNIRKLIKDGLVIKXPVAVHSRARVRKNTEARRKGRHCGFGKRRGTANARMPQKE 197
+ S +++RKLI ++ K +S R++K E KGR G G RGT AR P+K
Sbjct: 33 DATSREDVRKLIDLHIIQKKQKKGNSNYRLKKRIEQLAKGRRRGEGSVRGTKYARFPRKR 92
Query: 198 LWXXXXXXXXXXXXXXXTAKKIDRHLYHSLYMKAKGNVFKNKRVLMEYI 344
W T KID+ Y Y K F ++ L +I
Sbjct: 93 RWISRIRALRRELRELKTNNKIDKKTYRRYYRIIKSGSFVSRAQLRNHI 141
>UniRef50_Q680Q9 Cluster: Ribosomal protein L19; n=3; Arabidopsis
thaliana|Rep: Ribosomal protein L19 - Arabidopsis
thaliana (Mouse-ear cress)
Length = 114
Score = 54.0 bits (124), Expect = 2e-06
Identities = 37/96 (38%), Positives = 50/96 (52%), Gaps = 1/96 (1%)
Frame = +3
Query: 81 VAVHSRARVRKNTEARRKGRHCGFGKRRGTANARMPQKELWXXXXXXXXXXXXXXXTAKK 260
V++H +R R ARRK RH G+GK A R+ K L KK
Sbjct: 2 VSIHFHSRSR----ARRKCRHTGYGKDTMEALRRI-MKRLTRRLKMLKRLLKKFCWN-KK 55
Query: 261 IDRHLY-HSLYMKAKGNVFKNKRVLMEYIHRKKAEK 365
ID+ +Y H ++MK KG V+KNK VLME +H+ E+
Sbjct: 56 IDKLVYYHDMFMKVKGKVYKNKCVLMESMHKSSRER 91
>UniRef50_Q6QI84 Cluster: LRRG00124; n=5; Eukaryota|Rep: LRRG00124 -
Rattus norvegicus (Rat)
Length = 487
Score = 53.6 bits (123), Expect = 3e-06
Identities = 39/107 (36%), Positives = 49/107 (45%), Gaps = 1/107 (0%)
Frame = -3
Query: 403 RASAWSLSIFVLAFSAFFLWMYSMSTRLFLNTLPFAF-M*SEWYRCLSIFLAVLYFRSNF 227
+A AWS S F+ L L +PF + Y +++ L RS
Sbjct: 53 QAPAWSASSFLAGLVCLQFVDVLHENPLALEYIPFDLQIQGVIYMAVNLLRFQLSLRSRH 112
Query: 226 LRTLCLCTHSSFCGIRALAVPLLLPKPQ*RPFLRASVFLRTRAREWT 86
R L L +F GI+ALAVP L P PF R+ VF R RAREWT
Sbjct: 113 -RILILLIQVTFSGIQALAVPFLFPMLICLPFRRSKVFFRHRAREWT 158
Score = 44.8 bits (101), Expect = 0.001
Identities = 42/124 (33%), Positives = 59/124 (47%), Gaps = 7/124 (5%)
Frame = -2
Query: 368 GLLSLLPVDVLHEHTLVLEHITLRLHVE*VV*MPVNLLGSSVLQEQFS*NPLSLYP*FLL 189
GL+ L VDVLHE+ L LE+I L ++ V+ M VNLL + S + + + LL
Sbjct: 65 GLVCLQFVDVLHENPLALEYIPFDLQIQGVIYMAVNLLRFQLSLR--SRHRILI----LL 118
Query: 188 WHTRIGSTSSLTKATVTTLSTCLC-----VFADTGAG--VDCYRXLDDETILDQLTDVLX 30
+L + + CL VF A D +R DD+ I DQL D+L
Sbjct: 119 IQVTFSGIQALAVPFLFPMLICLPFRRSKVFFRHRAREWTDSHRLPDDQAIFDQLPDLLT 178
Query: 29 GVGV 18
GVG+
Sbjct: 179 GVGI 182
>UniRef50_Q6X9Y8 Cluster: Ribosomal protein L19; n=1; Equus
caballus|Rep: Ribosomal protein L19 - Equus caballus
(Horse)
Length = 81
Score = 53.2 bits (122), Expect = 4e-06
Identities = 27/72 (37%), Positives = 38/72 (52%)
Frame = +1
Query: 289 T*RRRVMCSRTSVCSWSTSTGXXXXXXXXXXXXXXXXPAAIK*RRHASAARNVLPPRRRN 468
T +RR MCS+T SW+TST PA ++ R+HASAA++ PR+R
Sbjct: 1 TRKRRAMCSKTRGFSWNTSTSRRQTRLARSFWRTRLRPAGLRPRKHASAAKSGSRPRKRK 60
Query: 469 CCRPSLEKTKPR 504
R S + +PR
Sbjct: 61 SSRLSPRRKRPR 72
>UniRef50_UPI00005A22A8 Cluster: PREDICTED: similar to ribosomal
protein L19; n=1; Canis lupus familiaris|Rep: PREDICTED:
similar to ribosomal protein L19 - Canis familiaris
Length = 169
Score = 52.8 bits (121), Expect = 5e-06
Identities = 24/48 (50%), Positives = 35/48 (72%)
Frame = +3
Query: 249 TAKKIDRHLYHSLYMKAKGNVFKNKRVLMEYIHRKKAEKARTKMLSDQ 392
+A K+ H+ HSLY KAKG VFKNK +L+E+ ++ KA+K K+L+ Q
Sbjct: 58 SAPKVALHMCHSLYRKAKGYVFKNKWILVEHNYKLKADKVPQKLLAAQ 105
>UniRef50_Q9UX89 Cluster: 50S ribosomal protein L19e; n=4;
Sulfolobaceae|Rep: 50S ribosomal protein L19e -
Sulfolobus solfataricus
Length = 151
Score = 51.2 bits (117), Expect = 2e-05
Identities = 31/94 (32%), Positives = 41/94 (43%), Gaps = 1/94 (1%)
Frame = +3
Query: 39 IRKLIKDGLVIKXPVAVHSRARVRKNTEARR-KGRHCGFGKRRGTANARMPQKELWXXXX 215
IR LIKDG +I S R+++ + R K G R+G AR K++W
Sbjct: 41 IRNLIKDGKIIVLKKVGISGGRLKERRKKRSLKSEGKKSGSRKGKKGARANSKQMWVKRV 100
Query: 216 XXXXXXXXXXXTAKKIDRHLYHSLYMKAKGNVFK 317
K IDRH Y LY+K KG +K
Sbjct: 101 RKIRAYLKWLRDHKVIDRHTYRELYLKTKGGNYK 134
>UniRef50_Q8ZVV8 Cluster: Ribosomal protein L19; n=4;
Pyrobaculum|Rep: Ribosomal protein L19 - Pyrobaculum
aerophilum
Length = 147
Score = 50.8 bits (116), Expect = 2e-05
Identities = 32/110 (29%), Positives = 47/110 (42%)
Frame = +3
Query: 36 NIRKLIKDGLVIKXPVAVHSRARVRKNTEARRKGRHCGFGKRRGTANARMPQKELWXXXX 215
++R LI GL+ P SR R R ++KGR G G R+G R ++E W
Sbjct: 37 DVRALIDQGLIWAEPERGVSRGRWRVRHIKKKKGRRRGHGSRKG---PRTDEEEAWKEKV 93
Query: 216 XXXXXXXXXXXTAKKIDRHLYHSLYMKAKGNVFKNKRVLMEYIHRKKAEK 365
K++ ++ LY KGN F++ L YI+ K K
Sbjct: 94 RAMRRFLNTLKRKGKLEPRVWRQLYRMVKGNYFRDLDHLKTYINEHKLAK 143
>UniRef50_Q3LVV0 Cluster: Ribosomal protein L19; n=1; Bigelowiella
natans|Rep: Ribosomal protein L19 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 150
Score = 43.2 bits (97), Expect = 0.004
Identities = 30/115 (26%), Positives = 51/115 (44%), Gaps = 4/115 (3%)
Frame = +3
Query: 12 LANTNSXQNIRKLIKDGLVIKXPVAVHSRARVRKNTEARRKGRHCGFGKRRGTANARMPQ 191
L + N+ + I L K ++IK + S R + ++ G G G+R+GT NAR
Sbjct: 31 LKSENNRKKIIDLFKKRIIIKKTIKGVSSYRKKLRKAKKQSGLKRGIGRRKGTKNARKKY 90
Query: 192 KELWXXXXXXXXXXXXXXXTAKKIDRH--LYHSLYM--KAKGNVFKNKRVLMEYI 344
K LW K+ + L + ++ K KGN F + + L+E++
Sbjct: 91 KILWIHKIRNQRKLLKMFRNKKQFLNYKILLNKVFFFSKIKGNFFSSTKHLLEHM 145
>UniRef50_A7DRM7 Cluster: Ribosomal protein L19e; n=1; Candidatus
Nitrosopumilus maritimus SCM1|Rep: Ribosomal protein
L19e - Candidatus Nitrosopumilus maritimus SCM1
Length = 151
Score = 41.1 bits (92), Expect = 0.016
Identities = 32/118 (27%), Positives = 52/118 (44%), Gaps = 3/118 (2%)
Frame = +3
Query: 12 LANTNSXQNIRKLIKDGLVIKXPVAVHSRARVRKNTEARRKGRHCGFGKRRGTANARMPQ 191
+A+ + +NIR LI + SR R + +A+R R G ++G AR+ +
Sbjct: 33 VADAITRENIRSLITANTIKIDSFTGTSRGRAQTK-KAQRNKRGTKQGSKQGRKGARVGK 91
Query: 192 KELWXXXXXXXXXXXXXXXTAKKIDRHLYHSLYMKAKGNVFKNK---RVLMEYIHRKK 356
KE++ K++ + +LY K GN +NK R LME I K+
Sbjct: 92 KEIYVAKVRSLRRLLKIAKDRKELTNPEFWALYKKVGGNTVRNKAHLRQLMEEIVAKR 149
>UniRef50_A0RUF8 Cluster: Ribosomal protein L19E; n=1; Cenarchaeum
symbiosum|Rep: Ribosomal protein L19E - Cenarchaeum
symbiosum
Length = 150
Score = 40.3 bits (90), Expect = 0.028
Identities = 29/119 (24%), Positives = 51/119 (42%)
Frame = +3
Query: 12 LANTNSXQNIRKLIKDGLVIKXPVAVHSRARVRKNTEARRKGRHCGFGKRRGTANARMPQ 191
+A+ + +IR LI + PV+ SR R + + K R G ++G AR+ +
Sbjct: 33 IADAITRNDIRSLITANTIKIKPVSGTSRGRAQHKRRQKAK-RGSKAGSKQGRMGARVGK 91
Query: 192 KELWXXXXXXXXXXXXXXXTAKKIDRHLYHSLYMKAKGNVFKNKRVLMEYIHRKKAEKA 368
K+++ K I + +LY K GN +NK L + KA+++
Sbjct: 92 KQVYVKKVRALRYLLAVFKDRKDITNPEFWALYKKVGGNTVRNKAHLHLLVDEIKAKRS 150
>UniRef50_Q8TM93 Cluster: O-methyltransferase; n=3;
Methanomicrobia|Rep: O-methyltransferase -
Methanosarcina acetivorans
Length = 349
Score = 33.5 bits (73), Expect = 3.3
Identities = 21/61 (34%), Positives = 32/61 (52%), Gaps = 1/61 (1%)
Frame = -2
Query: 545 YLLFTT*CLLLSGKRGFVFSSEGLQQFLLLGGNTFLAALACLLY-FIAAGLSLVAKHLRP 369
YL T C L+ K GF +S+G +Q+L+ G T+ L L Y +A +A+ +R
Sbjct: 65 YLNVLTACGLVIKKNGFYQNSQGAEQYLVTGSPTYYGDLILLEYERMAMSPKEIAERVRN 124
Query: 368 G 366
G
Sbjct: 125 G 125
>UniRef50_A7Q820 Cluster: Chromosome undetermined scaffold_62, whole
genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome undetermined scaffold_62, whole genome
shotgun sequence - Vitis vinifera (Grape)
Length = 430
Score = 33.1 bits (72), Expect = 4.3
Identities = 13/34 (38%), Positives = 22/34 (64%)
Frame = +3
Query: 12 LANTNSXQNIRKLIKDGLVIKXPVAVHSRARVRK 113
++ N QNI KL+KD +I+ P +HS++ R+
Sbjct: 42 ISMVNFRQNISKLVKDDFIIRKPTKIHSQSVHRR 75
>UniRef50_A2YPT1 Cluster: Putative uncharacterized protein; n=3;
Oryza sativa|Rep: Putative uncharacterized protein -
Oryza sativa subsp. indica (Rice)
Length = 55
Score = 33.1 bits (72), Expect = 4.3
Identities = 17/34 (50%), Positives = 21/34 (61%)
Frame = +3
Query: 291 MKAKGNVFKNKRVLMEYIHRKKAEKARTKMLSDQ 392
MK KGN+ NKR + +AEKAR + LSDQ
Sbjct: 1 MKVKGNMLNNKRGPYGEYPQVQAEKARKRTLSDQ 34
>UniRef50_Q8DFA7 Cluster: Flagellar motor protein MotB; n=31;
Gammaproteobacteria|Rep: Flagellar motor protein MotB -
Vibrio vulnificus
Length = 300
Score = 32.7 bits (71), Expect = 5.7
Identities = 14/40 (35%), Positives = 22/40 (55%)
Frame = -2
Query: 410 IAAGLSLVAKHLRPGLLSLLPVDVLHEHTLVLEHITLRLH 291
I G S++A+ RPG P+DV+ + T+ + TL H
Sbjct: 51 IPKGTSIIAQEFRPGRPEPTPIDVIMQQTIDITQQTLEFH 90
>UniRef50_A3QGM1 Cluster: Tetratricopeptide TPR_2 repeat protein
precursor; n=1; Shewanella loihica PV-4|Rep:
Tetratricopeptide TPR_2 repeat protein precursor -
Shewanella loihica (strain BAA-1088 / PV-4)
Length = 718
Score = 32.7 bits (71), Expect = 5.7
Identities = 20/53 (37%), Positives = 33/53 (62%)
Frame = -2
Query: 464 LLLGGNTFLAALACLLYFIAAGLSLVAKHLRPGLLSLLPVDVLHEHTLVLEHI 306
L LG +T+L A A L+ ++ GL+ A +RPGL+ LL ++ ++ H + E I
Sbjct: 553 LNLGNDTYLEATARLMDTLSRGLAGEAYLIRPGLI-LLTLNEVNAHQALQERI 604
>UniRef50_A6RYJ9 Cluster: Predicted protein; n=1; Botryotinia
fuckeliana B05.10|Rep: Predicted protein - Botryotinia
fuckeliana B05.10
Length = 72
Score = 32.7 bits (71), Expect = 5.7
Identities = 18/36 (50%), Positives = 22/36 (61%), Gaps = 3/36 (8%)
Frame = +2
Query: 65 RHQXTCSSPL-PRPCPQKHRG-T*KGS-SLWLW*EK 163
RH TC+ P P CP H+G +GS S+WLW EK
Sbjct: 2 RHDTTCTPPFRPSICP-SHKGIASRGSGSMWLWGEK 36
>UniRef50_A7HD11 Cluster: Polysulphide reductase NrfD; n=2;
Anaeromyxobacter|Rep: Polysulphide reductase NrfD -
Anaeromyxobacter sp. Fw109-5
Length = 417
Score = 32.3 bits (70), Expect = 7.5
Identities = 16/48 (33%), Positives = 26/48 (54%)
Frame = -2
Query: 500 GFVFSSEGLQQFLLLGGNTFLAALACLLYFIAAGLSLVAKHLRPGLLS 357
G V +G + +L GG + A +A LL +A G + A +R GL++
Sbjct: 3 GVVEFVKGCARLVLTGGRAYKAWMAALLALVAIGATAYAHQMRAGLIA 50
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 498,768,145
Number of Sequences: 1657284
Number of extensions: 9969778
Number of successful extensions: 28491
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 27637
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28461
length of database: 575,637,011
effective HSP length: 96
effective length of database: 416,537,747
effective search space used: 35405708495
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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