BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= fcaL-P01_F_K17 (546 letters) Database: spombe 5004 sequences; 2,362,478 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value SPCC1682.14 |rpl1902|rpl19-2|60S ribosomal protein L19B|Schizosa... 146 1e-36 SPBC56F2.02 |rpl1901|rpl19-1|60S ribosomal protein L19|Schizosac... 146 1e-36 SPAC1F7.07c |fip1||iron permease Fip1|Schizosaccharomyces pombe|... 27 2.4 SPBC337.07c |||carboxypeptidase |Schizosaccharomyces pombe|chr 2... 26 3.2 SPBC21.05c |ral2||Ras guanyl-nucleotide exchange factor Ral2 |Sc... 26 4.2 SPBC216.07c |tor2|SPBC646.01c|phosphatidylinositol kinase Tor2|S... 25 9.6 SPCC4G3.18 |||conserved fungal family|Schizosaccharomyces pombe|... 25 9.6 SPAC10F6.12c |mam4||protein-S isoprenylcysteine O-methyltransfer... 25 9.6 SPAC10F6.01c ||SPAC4C5.05c|sulfite reductase beta subunit |Schiz... 25 9.6 SPAC1D4.09c |||DUF602 family protein|Schizosaccharomyces pombe|c... 25 9.6 SPCC338.15 |||dolichyl-di-phosphooligosaccharide-protein glycotr... 25 9.6 >SPCC1682.14 |rpl1902|rpl19-2|60S ribosomal protein L19B|Schizosaccharomyces pombe|chr 3|||Manual Length = 193 Score = 146 bits (355), Expect = 1e-36 Identities = 67/127 (52%), Positives = 88/127 (69%) Frame = +3 Query: 12 LANTNSXQNIRKLIKDGLVIKXPVAVHSRARVRKNTEARRKGRHCGFGKRRGTANARMPQ 191 ++N NS QNIRKL+KDGLVI+ P +HSR R+RK A+R GRH G+GKR+GTA ARMP Sbjct: 32 ISNANSRQNIRKLVKDGLVIRKPNLMHSRFRIRKTHAAKRLGRHTGYGKRKGTAEARMPS 91 Query: 192 KELWXXXXXXXXXXXXXXXTAKKIDRHLYHSLYMKAKGNVFKNKRVLMEYIHRKKAEKAR 371 +W + KID+HLYH+LY++AKGN FK+KR L+E+I R KAE R Sbjct: 92 TVVWMRRQRVLRRLLRKYRESGKIDKHLYHTLYLEAKGNTFKHKRALIEHIQRAKAEANR 151 Query: 372 TKMLSDQ 392 TK++ +Q Sbjct: 152 TKLIQEQ 158 >SPBC56F2.02 |rpl1901|rpl19-1|60S ribosomal protein L19|Schizosaccharomyces pombe|chr 2|||Manual Length = 193 Score = 146 bits (355), Expect = 1e-36 Identities = 67/127 (52%), Positives = 88/127 (69%) Frame = +3 Query: 12 LANTNSXQNIRKLIKDGLVIKXPVAVHSRARVRKNTEARRKGRHCGFGKRRGTANARMPQ 191 ++N NS QN+RKLIKDGLVI+ P +HSR R+RK A+R GRH G+GKR+GTA ARMP Sbjct: 32 ISNANSRQNVRKLIKDGLVIRKPNLMHSRFRIRKTHAAKRLGRHTGYGKRKGTAEARMPS 91 Query: 192 KELWXXXXXXXXXXXXXXXTAKKIDRHLYHSLYMKAKGNVFKNKRVLMEYIHRKKAEKAR 371 +W + KID+HLYH+LY++AKGN FK+KR L+E+I R KAE R Sbjct: 92 AVVWMRRQRVLRRLLRKYRESGKIDKHLYHTLYLEAKGNTFKHKRALIEHIQRAKAEANR 151 Query: 372 TKMLSDQ 392 TK++ +Q Sbjct: 152 TKLIQEQ 158 >SPAC1F7.07c |fip1||iron permease Fip1|Schizosaccharomyces pombe|chr 1|||Manual Length = 397 Score = 26.6 bits (56), Expect = 2.4 Identities = 14/29 (48%), Positives = 17/29 (58%), Gaps = 5/29 (17%) Frame = -2 Query: 467 FLLLGGNT-----FLAALACLLYFIAAGL 396 F+ GGN FL A C+LY I+AGL Sbjct: 195 FIYRGGNVMNLQWFLIASTCILYLISAGL 223 >SPBC337.07c |||carboxypeptidase |Schizosaccharomyces pombe|chr 2|||Manual Length = 497 Score = 26.2 bits (55), Expect = 3.2 Identities = 10/17 (58%), Positives = 11/17 (64%) Frame = -1 Query: 198 VPSVAYAHWQYLFSYQS 148 +PSV YA WQ L Y S Sbjct: 255 IPSVCYAAWQLLAKYDS 271 >SPBC21.05c |ral2||Ras guanyl-nucleotide exchange factor Ral2 |Schizosaccharomyces pombe|chr 2|||Manual Length = 611 Score = 25.8 bits (54), Expect = 4.2 Identities = 11/32 (34%), Positives = 17/32 (53%), Gaps = 1/32 (3%) Frame = -3 Query: 358 AFFLWMYSMSTRLFLNTLPFAFM-*SEWYRCL 266 AF LW+YS+ L+L + W++CL Sbjct: 337 AFVLWVYSLDKELWLQLDMLGVLNHGSWFKCL 368 >SPBC216.07c |tor2|SPBC646.01c|phosphatidylinositol kinase Tor2|Schizosaccharomyces pombe|chr 2|||Manual Length = 2337 Score = 24.6 bits (51), Expect = 9.6 Identities = 15/30 (50%), Positives = 17/30 (56%) Frame = -2 Query: 437 AALACLLYFIAAGLSLVAKHLRPGLLSLLP 348 A L CLL IAA L+ H+ P L LLP Sbjct: 626 AKLLCLL--IAAAPRLIESHVEPILQILLP 653 >SPCC4G3.18 |||conserved fungal family|Schizosaccharomyces pombe|chr 3|||Manual Length = 828 Score = 24.6 bits (51), Expect = 9.6 Identities = 16/37 (43%), Positives = 23/37 (62%) Frame = -2 Query: 398 LSLVAKHLRPGLLSLLPVDVLHEHTLVLEHITLRLHV 288 LSL K + + +LL + + H HTLV E +TL+L V Sbjct: 324 LSLPVKSVESSVQALLFMVLPHLHTLVNE-LTLKLFV 359 >SPAC10F6.12c |mam4||protein-S isoprenylcysteine O-methyltransferase Mam4|Schizosaccharomyces pombe|chr 1|||Manual Length = 236 Score = 24.6 bits (51), Expect = 9.6 Identities = 12/36 (33%), Positives = 20/36 (55%) Frame = -2 Query: 521 LLLSGKRGFVFSSEGLQQFLLLGGNTFLAALACLLY 414 +L +GK ++ GL + LL GG +F + CL + Sbjct: 70 ILNNGKAYWLAMLVGLLECLLSGGKSFAKVINCLRF 105 >SPAC10F6.01c ||SPAC4C5.05c|sulfite reductase beta subunit |Schizosaccharomyces pombe|chr 1|||Manual Length = 1473 Score = 24.6 bits (51), Expect = 9.6 Identities = 14/39 (35%), Positives = 19/39 (48%) Frame = -2 Query: 161 SLTKATVTTLSTCLCVFADTGAGVDCYRXLDDETILDQL 45 ++ K +TTL C D V C ++ETI DQL Sbjct: 1013 NIVKVFLTTLGAC----GDVARNVTCSSTPNNETIHDQL 1047 >SPAC1D4.09c |||DUF602 family protein|Schizosaccharomyces pombe|chr 1|||Manual Length = 240 Score = 24.6 bits (51), Expect = 9.6 Identities = 9/22 (40%), Positives = 14/22 (63%) Frame = -1 Query: 162 FSYQSHSDDPFYVPLCFCGHGR 97 FS + +D+P Y P+ CG G+ Sbjct: 37 FSQCAITDEPLYPPIVSCGLGK 58 >SPCC338.15 |||dolichyl-di-phosphooligosaccharide-protein glycotransferase subunit |Schizosaccharomyces pombe|chr 3|||Manual Length = 437 Score = 24.6 bits (51), Expect = 9.6 Identities = 11/23 (47%), Positives = 15/23 (65%) Frame = -2 Query: 500 GFVFSSEGLQQFLLLGGNTFLAA 432 G VFS + L +F+ GGN F+ A Sbjct: 83 GPVFSPKSLLEFVQSGGNLFVVA 105 Database: spombe Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 2,362,478 Number of sequences in database: 5004 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 1,998,997 Number of Sequences: 5004 Number of extensions: 39122 Number of successful extensions: 113 Number of sequences better than 10.0: 11 Number of HSP's better than 10.0 without gapping: 110 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 111 length of database: 2,362,478 effective HSP length: 69 effective length of database: 2,017,202 effective search space used: 225926624 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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