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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P01_F_K17
         (546 letters)

Database: spombe 
           5004 sequences; 2,362,478 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SPCC1682.14 |rpl1902|rpl19-2|60S ribosomal protein L19B|Schizosa...   146   1e-36
SPBC56F2.02 |rpl1901|rpl19-1|60S ribosomal protein L19|Schizosac...   146   1e-36
SPAC1F7.07c |fip1||iron permease Fip1|Schizosaccharomyces pombe|...    27   2.4  
SPBC337.07c |||carboxypeptidase |Schizosaccharomyces pombe|chr 2...    26   3.2  
SPBC21.05c |ral2||Ras guanyl-nucleotide exchange factor Ral2 |Sc...    26   4.2  
SPBC216.07c |tor2|SPBC646.01c|phosphatidylinositol kinase Tor2|S...    25   9.6  
SPCC4G3.18 |||conserved fungal family|Schizosaccharomyces pombe|...    25   9.6  
SPAC10F6.12c |mam4||protein-S isoprenylcysteine O-methyltransfer...    25   9.6  
SPAC10F6.01c ||SPAC4C5.05c|sulfite reductase beta subunit |Schiz...    25   9.6  
SPAC1D4.09c |||DUF602 family protein|Schizosaccharomyces pombe|c...    25   9.6  
SPCC338.15 |||dolichyl-di-phosphooligosaccharide-protein glycotr...    25   9.6  

>SPCC1682.14 |rpl1902|rpl19-2|60S ribosomal protein
           L19B|Schizosaccharomyces pombe|chr 3|||Manual
          Length = 193

 Score =  146 bits (355), Expect = 1e-36
 Identities = 67/127 (52%), Positives = 88/127 (69%)
 Frame = +3

Query: 12  LANTNSXQNIRKLIKDGLVIKXPVAVHSRARVRKNTEARRKGRHCGFGKRRGTANARMPQ 191
           ++N NS QNIRKL+KDGLVI+ P  +HSR R+RK   A+R GRH G+GKR+GTA ARMP 
Sbjct: 32  ISNANSRQNIRKLVKDGLVIRKPNLMHSRFRIRKTHAAKRLGRHTGYGKRKGTAEARMPS 91

Query: 192 KELWXXXXXXXXXXXXXXXTAKKIDRHLYHSLYMKAKGNVFKNKRVLMEYIHRKKAEKAR 371
             +W                + KID+HLYH+LY++AKGN FK+KR L+E+I R KAE  R
Sbjct: 92  TVVWMRRQRVLRRLLRKYRESGKIDKHLYHTLYLEAKGNTFKHKRALIEHIQRAKAEANR 151

Query: 372 TKMLSDQ 392
           TK++ +Q
Sbjct: 152 TKLIQEQ 158


>SPBC56F2.02 |rpl1901|rpl19-1|60S ribosomal protein
           L19|Schizosaccharomyces pombe|chr 2|||Manual
          Length = 193

 Score =  146 bits (355), Expect = 1e-36
 Identities = 67/127 (52%), Positives = 88/127 (69%)
 Frame = +3

Query: 12  LANTNSXQNIRKLIKDGLVIKXPVAVHSRARVRKNTEARRKGRHCGFGKRRGTANARMPQ 191
           ++N NS QN+RKLIKDGLVI+ P  +HSR R+RK   A+R GRH G+GKR+GTA ARMP 
Sbjct: 32  ISNANSRQNVRKLIKDGLVIRKPNLMHSRFRIRKTHAAKRLGRHTGYGKRKGTAEARMPS 91

Query: 192 KELWXXXXXXXXXXXXXXXTAKKIDRHLYHSLYMKAKGNVFKNKRVLMEYIHRKKAEKAR 371
             +W                + KID+HLYH+LY++AKGN FK+KR L+E+I R KAE  R
Sbjct: 92  AVVWMRRQRVLRRLLRKYRESGKIDKHLYHTLYLEAKGNTFKHKRALIEHIQRAKAEANR 151

Query: 372 TKMLSDQ 392
           TK++ +Q
Sbjct: 152 TKLIQEQ 158


>SPAC1F7.07c |fip1||iron permease Fip1|Schizosaccharomyces pombe|chr
           1|||Manual
          Length = 397

 Score = 26.6 bits (56), Expect = 2.4
 Identities = 14/29 (48%), Positives = 17/29 (58%), Gaps = 5/29 (17%)
 Frame = -2

Query: 467 FLLLGGNT-----FLAALACLLYFIAAGL 396
           F+  GGN      FL A  C+LY I+AGL
Sbjct: 195 FIYRGGNVMNLQWFLIASTCILYLISAGL 223


>SPBC337.07c |||carboxypeptidase |Schizosaccharomyces pombe|chr
           2|||Manual
          Length = 497

 Score = 26.2 bits (55), Expect = 3.2
 Identities = 10/17 (58%), Positives = 11/17 (64%)
 Frame = -1

Query: 198 VPSVAYAHWQYLFSYQS 148
           +PSV YA WQ L  Y S
Sbjct: 255 IPSVCYAAWQLLAKYDS 271


>SPBC21.05c |ral2||Ras guanyl-nucleotide exchange factor Ral2
           |Schizosaccharomyces pombe|chr 2|||Manual
          Length = 611

 Score = 25.8 bits (54), Expect = 4.2
 Identities = 11/32 (34%), Positives = 17/32 (53%), Gaps = 1/32 (3%)
 Frame = -3

Query: 358 AFFLWMYSMSTRLFLNTLPFAFM-*SEWYRCL 266
           AF LW+YS+   L+L       +    W++CL
Sbjct: 337 AFVLWVYSLDKELWLQLDMLGVLNHGSWFKCL 368


>SPBC216.07c |tor2|SPBC646.01c|phosphatidylinositol kinase
           Tor2|Schizosaccharomyces pombe|chr 2|||Manual
          Length = 2337

 Score = 24.6 bits (51), Expect = 9.6
 Identities = 15/30 (50%), Positives = 17/30 (56%)
 Frame = -2

Query: 437 AALACLLYFIAAGLSLVAKHLRPGLLSLLP 348
           A L CLL  IAA   L+  H+ P L  LLP
Sbjct: 626 AKLLCLL--IAAAPRLIESHVEPILQILLP 653


>SPCC4G3.18 |||conserved fungal family|Schizosaccharomyces pombe|chr
           3|||Manual
          Length = 828

 Score = 24.6 bits (51), Expect = 9.6
 Identities = 16/37 (43%), Positives = 23/37 (62%)
 Frame = -2

Query: 398 LSLVAKHLRPGLLSLLPVDVLHEHTLVLEHITLRLHV 288
           LSL  K +   + +LL + + H HTLV E +TL+L V
Sbjct: 324 LSLPVKSVESSVQALLFMVLPHLHTLVNE-LTLKLFV 359


>SPAC10F6.12c |mam4||protein-S isoprenylcysteine O-methyltransferase
           Mam4|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 236

 Score = 24.6 bits (51), Expect = 9.6
 Identities = 12/36 (33%), Positives = 20/36 (55%)
 Frame = -2

Query: 521 LLLSGKRGFVFSSEGLQQFLLLGGNTFLAALACLLY 414
           +L +GK  ++    GL + LL GG +F   + CL +
Sbjct: 70  ILNNGKAYWLAMLVGLLECLLSGGKSFAKVINCLRF 105


>SPAC10F6.01c ||SPAC4C5.05c|sulfite reductase beta subunit
            |Schizosaccharomyces pombe|chr 1|||Manual
          Length = 1473

 Score = 24.6 bits (51), Expect = 9.6
 Identities = 14/39 (35%), Positives = 19/39 (48%)
 Frame = -2

Query: 161  SLTKATVTTLSTCLCVFADTGAGVDCYRXLDDETILDQL 45
            ++ K  +TTL  C     D    V C    ++ETI DQL
Sbjct: 1013 NIVKVFLTTLGAC----GDVARNVTCSSTPNNETIHDQL 1047


>SPAC1D4.09c |||DUF602 family protein|Schizosaccharomyces pombe|chr
           1|||Manual
          Length = 240

 Score = 24.6 bits (51), Expect = 9.6
 Identities = 9/22 (40%), Positives = 14/22 (63%)
 Frame = -1

Query: 162 FSYQSHSDDPFYVPLCFCGHGR 97
           FS  + +D+P Y P+  CG G+
Sbjct: 37  FSQCAITDEPLYPPIVSCGLGK 58


>SPCC338.15 |||dolichyl-di-phosphooligosaccharide-protein
           glycotransferase subunit |Schizosaccharomyces pombe|chr
           3|||Manual
          Length = 437

 Score = 24.6 bits (51), Expect = 9.6
 Identities = 11/23 (47%), Positives = 15/23 (65%)
 Frame = -2

Query: 500 GFVFSSEGLQQFLLLGGNTFLAA 432
           G VFS + L +F+  GGN F+ A
Sbjct: 83  GPVFSPKSLLEFVQSGGNLFVVA 105


  Database: spombe
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 2,362,478
  Number of sequences in database:  5004
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,998,997
Number of Sequences: 5004
Number of extensions: 39122
Number of successful extensions: 113
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 110
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 111
length of database: 2,362,478
effective HSP length: 69
effective length of database: 2,017,202
effective search space used: 225926624
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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