Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P01_F_K16
         (778 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory recept...    30   0.018
AF219117-1|AAF71999.1|  406|Tribolium castaneum tailless ortholo...    25   0.68 
AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5 prot...    23   2.7  
EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetyla...    22   6.3  
EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetyla...    22   6.3  
AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosin...    21   8.3  

>AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory receptor
           candidate 5 protein.
          Length = 522

 Score = 30.3 bits (65), Expect = 0.018
 Identities = 23/66 (34%), Positives = 33/66 (50%), Gaps = 3/66 (4%)
 Frame = +3

Query: 474 IVGNFIITLILDNIGRKKSHI-LTIFPNLAGWFLFLL--VNNFPGLMAARFLQGIAMGML 644
           IVG F    I D I +K  +I + ++ N A     LL  +N+FP   AARF       +L
Sbjct: 442 IVGTFNSVFICDLIEQKVKNIQMLVYQNEAEEVKILLDVINHFPHFTAARFFDLNRKTIL 501

Query: 645 GPLGSI 662
           G L ++
Sbjct: 502 GVLNAL 507


>AF219117-1|AAF71999.1|  406|Tribolium castaneum tailless ortholog
           protein.
          Length = 406

 Score = 25.0 bits (52), Expect = 0.68
 Identities = 12/24 (50%), Positives = 15/24 (62%)
 Frame = -1

Query: 610 AAMRPGKLLTSRNRNQPARFGKIV 539
           A MR  K +T+    QP RFGKI+
Sbjct: 336 AQMRLNKHVTTTYPKQPLRFGKIL 359


>AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5
           protein.
          Length = 533

 Score = 23.0 bits (47), Expect = 2.7
 Identities = 9/23 (39%), Positives = 13/23 (56%)
 Frame = +2

Query: 359 LRHRFPGYIDSESPEIRFPHPSY 427
           LR  + G+ DS SP  + PH  +
Sbjct: 216 LRGNWAGFADSHSPLYKRPHDQW 238


>EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetylase
           2B protein.
          Length = 528

 Score = 21.8 bits (44), Expect = 6.3
 Identities = 10/29 (34%), Positives = 14/29 (48%)
 Frame = +3

Query: 402 KSDSHIHLTRSEESWIASVVGFALIVGNF 488
           K D +     S + W+A + G  LIV  F
Sbjct: 253 KEDPNYWSQGSYDDWLAEMAGARLIVERF 281


>EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetylase
           2A protein.
          Length = 535

 Score = 21.8 bits (44), Expect = 6.3
 Identities = 10/29 (34%), Positives = 14/29 (48%)
 Frame = +3

Query: 402 KSDSHIHLTRSEESWIASVVGFALIVGNF 488
           K D +     S + W+A + G  LIV  F
Sbjct: 260 KEDPNYWSQGSYDDWLAEMAGARLIVERF 288


>AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosine
           kinase Torso-likeprotein protein.
          Length = 803

 Score = 21.4 bits (43), Expect = 8.3
 Identities = 11/42 (26%), Positives = 21/42 (50%)
 Frame = +3

Query: 402 KSDSHIHLTRSEESWIASVVGFALIVGNFIITLILDNIGRKK 527
           K+D +I    SE+ W   V+  A ++   I T+ ++    K+
Sbjct: 365 KTDINITTVPSEQQWGILVLIIAPLIATLIATVTVNYYRHKQ 406


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 174,201
Number of Sequences: 336
Number of extensions: 3766
Number of successful extensions: 10
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20961338
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)