Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P01_F_K16
         (778 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF395079-1|AAK97461.1|  371|Anopheles gambiae basic helix-loop-h...    28   0.28 
U42429-1|AAB54088.1|  596|Anopheles gambiae engrailed protein.         24   4.6  
U42214-1|AAB58461.1|  596|Anopheles gambiae engrailed protein.         24   4.6  

>AF395079-1|AAK97461.1|  371|Anopheles gambiae basic
           helix-loop-helix transcriptionfactor ASH protein.
          Length = 371

 Score = 28.3 bits (60), Expect = 0.28
 Identities = 10/21 (47%), Positives = 13/21 (61%)
 Frame = +2

Query: 488 HNHINSGQHRQEEVSHPHYLP 550
           H H    QH+Q+  SHPH+ P
Sbjct: 314 HQHQPQQQHQQQYHSHPHHTP 334


>U42429-1|AAB54088.1|  596|Anopheles gambiae engrailed protein.
          Length = 596

 Score = 24.2 bits (50), Expect = 4.6
 Identities = 12/38 (31%), Positives = 15/38 (39%)
 Frame = +2

Query: 470 PHRGKLHNHINSGQHRQEEVSHPHYLPKPRRLVPVSTS 583
           PH  + H H +   H      HP   P P+   P S S
Sbjct: 92  PHHHQ-HPHHHQLPHHPHHQHHPQQQPSPQTSPPASIS 128


>U42214-1|AAB58461.1|  596|Anopheles gambiae engrailed protein.
          Length = 596

 Score = 24.2 bits (50), Expect = 4.6
 Identities = 12/38 (31%), Positives = 15/38 (39%)
 Frame = +2

Query: 470 PHRGKLHNHINSGQHRQEEVSHPHYLPKPRRLVPVSTS 583
           PH  + H H +   H      HP   P P+   P S S
Sbjct: 92  PHHHQ-HPHHHQLPHHPHHQHHPQQQPSPQTSPPASIS 128


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 757,882
Number of Sequences: 2352
Number of extensions: 14823
Number of successful extensions: 49
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 47
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 49
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 81081585
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)