Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P01_F_K16
         (778 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein ...    24   1.4  
DQ667192-1|ABG75744.1|  489|Apis mellifera pH-sensitive chloride...    23   3.2  
DQ667191-1|ABG75743.1|  475|Apis mellifera pH-sensitive chloride...    23   3.2  
DQ667189-1|ABG75741.1|  458|Apis mellifera pH-sensitive chloride...    23   3.2  
AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cycl...    22   5.5  
AJ276511-1|CAC06383.1|  352|Apis mellifera Antennapedia protein ...    22   7.3  
EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage prot...    21   9.7  
AY500239-1|AAR92109.1|  555|Apis mellifera neuronal nicotinic ac...    21   9.7  
AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor p...    21   9.7  

>AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein 1
           protein.
          Length = 500

 Score = 24.2 bits (50), Expect = 1.4
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = +2

Query: 452 ICRRFRPHRGKLHNHI 499
           +C R   H GKLH H+
Sbjct: 152 VCERAFEHSGKLHRHM 167


>DQ667192-1|ABG75744.1|  489|Apis mellifera pH-sensitive chloride
           channel variant 4 protein.
          Length = 489

 Score = 23.0 bits (47), Expect = 3.2
 Identities = 9/21 (42%), Positives = 13/21 (61%)
 Frame = -3

Query: 197 LLSAQYNKTFRPPDDNTITTD 135
           LLS +Y+K   PP   T+T +
Sbjct: 69  LLSTRYDKRLLPPVQGTLTVN 89


>DQ667191-1|ABG75743.1|  475|Apis mellifera pH-sensitive chloride
           channel variant 3 protein.
          Length = 475

 Score = 23.0 bits (47), Expect = 3.2
 Identities = 9/21 (42%), Positives = 13/21 (61%)
 Frame = -3

Query: 197 LLSAQYNKTFRPPDDNTITTD 135
           LLS +Y+K   PP   T+T +
Sbjct: 69  LLSTRYDKRLLPPVQGTLTVN 89


>DQ667189-1|ABG75741.1|  458|Apis mellifera pH-sensitive chloride
           channel protein.
          Length = 458

 Score = 23.0 bits (47), Expect = 3.2
 Identities = 9/21 (42%), Positives = 13/21 (61%)
 Frame = -3

Query: 197 LLSAQYNKTFRPPDDNTITTD 135
           LLS +Y+K   PP   T+T +
Sbjct: 69  LLSTRYDKRLLPPVQGTLTVN 89


>AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cyclase
           beta-3 protein.
          Length = 832

 Score = 22.2 bits (45), Expect = 5.5
 Identities = 8/37 (21%), Positives = 20/37 (54%)
 Frame = +3

Query: 477 VGNFIITLILDNIGRKKSHILTIFPNLAGWFLFLLVN 587
           +GN ++ ++ D +G+K +H   +   L  +    ++N
Sbjct: 227 IGNSLMVILPDLVGKKITHFFDLVRPLIAFKFHSILN 263


>AJ276511-1|CAC06383.1|  352|Apis mellifera Antennapedia protein
           protein.
          Length = 352

 Score = 21.8 bits (44), Expect = 7.3
 Identities = 7/19 (36%), Positives = 9/19 (47%)
 Frame = +2

Query: 497 INSGQHRQEEVSHPHYLPK 553
           + S  H Q    HPH  P+
Sbjct: 164 VESQMHHQMHTQHPHMQPQ 182


>EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage protein
           protein.
          Length = 1010

 Score = 21.4 bits (43), Expect = 9.7
 Identities = 8/27 (29%), Positives = 15/27 (55%)
 Frame = +3

Query: 621 QGIAMGMLGPLGSIIIGEMTDPKSRGV 701
           QG+ + +  P G  I+G++ +   R V
Sbjct: 363 QGVFLSLYQPQGMNILGDLIEGTGRSV 389


>AY500239-1|AAR92109.1|  555|Apis mellifera neuronal nicotinic
           acetylcholine receptoralpha7-1 protein.
          Length = 555

 Score = 21.4 bits (43), Expect = 9.7
 Identities = 9/28 (32%), Positives = 10/28 (35%)
 Frame = +2

Query: 338 HQHRGPWLRHRFPGYIDSESPEIRFPHP 421
           HQH  P     +P  I         PHP
Sbjct: 442 HQHSTPLAHSSYPAAIQIGHTPHHHPHP 469


>AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor
           protein.
          Length = 587

 Score = 21.4 bits (43), Expect = 9.7
 Identities = 9/22 (40%), Positives = 11/22 (50%)
 Frame = +2

Query: 461 RFRPHRGKLHNHINSGQHRQEE 526
           R    RG +HN  N+G  R  E
Sbjct: 306 RIHRGRGSVHNGSNNGSPRSPE 327


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 207,944
Number of Sequences: 438
Number of extensions: 4839
Number of successful extensions: 32
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 32
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 32
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 24396777
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)