Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P01_F_K11
         (468 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    22   3.3  
AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembran...    21   4.3  
AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembran...    21   4.3  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    21   5.7  
AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    21   5.7  
AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory recept...    21   7.5  
DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    20   9.9  

>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 21.8 bits (44), Expect = 3.3
 Identities = 8/22 (36%), Positives = 11/22 (50%)
 Frame = -3

Query: 352  DDFHACWLTIPSSLWNSFLEVP 287
            +  H  W T PS+ W+S    P
Sbjct: 1029 EHMHPDWTTKPSTWWSSTTTSP 1050


>AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembrane
           transporter protein.
          Length = 669

 Score = 21.4 bits (43), Expect = 4.3
 Identities = 7/17 (41%), Positives = 9/17 (52%)
 Frame = -3

Query: 340 ACWLTIPSSLWNSFLEV 290
           +CW    + LW S L V
Sbjct: 392 SCWAQFKAVLWRSILAV 408


>AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembrane
           transporter white protein.
          Length = 669

 Score = 21.4 bits (43), Expect = 4.3
 Identities = 7/17 (41%), Positives = 9/17 (52%)
 Frame = -3

Query: 340 ACWLTIPSSLWNSFLEV 290
           +CW    + LW S L V
Sbjct: 392 SCWAQFKAVLWRSILAV 408


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 21.0 bits (42), Expect = 5.7
 Identities = 11/25 (44%), Positives = 14/25 (56%)
 Frame = -1

Query: 327 LFLLHFGTAFWRYL*LSPFHVQVVR 253
           +F  HF  AF  Y   S F++ VVR
Sbjct: 307 IFPTHFYCAFSLYPLKSTFYLNVVR 331


>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 21.0 bits (42), Expect = 5.7
 Identities = 6/9 (66%), Positives = 8/9 (88%)
 Frame = -2

Query: 254 VGPRCDSDV 228
           VGPRC+ D+
Sbjct: 291 VGPRCEGDI 299


>AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory receptor
           candidate 5 protein.
          Length = 522

 Score = 20.6 bits (41), Expect = 7.5
 Identities = 10/23 (43%), Positives = 13/23 (56%)
 Frame = +2

Query: 17  LWIFHFTLWLWKSGKFQFIFENK 85
           LWI  FTL +  SG ++  F  K
Sbjct: 36  LWILLFTLGVTISGVYRTDFYKK 58


>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
            protein.
          Length = 947

 Score = 20.2 bits (40), Expect = 9.9
 Identities = 11/42 (26%), Positives = 21/42 (50%)
 Frame = +3

Query: 252  NGRPAHEKD*VRGTSRKLFQSEEGIVNQHA*KSSTINLCRIV 377
            NG+P   ++  + T  KLF+ ++    + A   +T  + R V
Sbjct: 880  NGKPTCWRECDKATCEKLFRMKKSSALRPASGGTTARVVRCV 921


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 93,249
Number of Sequences: 336
Number of extensions: 1855
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used: 10826639
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)