Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P01_F_K11
         (468 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF016427-2|AAB65352.1|   54|Caenorhabditis elegans Hypothetical ...    55   2e-08
L23647-8|AAK29993.1|   54|Caenorhabditis elegans Hypothetical pr...    46   2e-05
L07144-2|AAK21439.1|   54|Caenorhabditis elegans Hypothetical pr...    46   2e-05
Z78417-12|CAO78731.1|  318|Caenorhabditis elegans Hypothetical p...    29   2.2  
Z78417-11|CAE17739.1|  294|Caenorhabditis elegans Hypothetical p...    29   2.2  
U39999-5|AAA81106.1|  263|Caenorhabditis elegans Hypothetical pr...    28   3.8  
AF039051-4|AAB94264.1|  539|Caenorhabditis elegans Hypothetical ...    27   5.1  

>AF016427-2|AAB65352.1|   54|Caenorhabditis elegans Hypothetical
           protein F32D1.2 protein.
          Length = 54

 Score = 55.2 bits (127), Expect = 2e-08
 Identities = 23/51 (45%), Positives = 34/51 (66%)
 Frame = +3

Query: 108 MSAWRQAGLTYINYSNIAAKVLRRSLKQEFRAEALKRDESHVRVTPWANGR 260
           M AWR AGL Y+ YS IAA++ R+  KQ     A+K+ E+ +++T W NG+
Sbjct: 1   MVAWRAAGLNYVRYSQIAAEITRKCTKQVGGKAAVKKPEATLKITTWENGK 51


>L23647-8|AAK29993.1|   54|Caenorhabditis elegans Hypothetical
           protein ZC262.5 protein.
          Length = 54

 Score = 45.6 bits (103), Expect = 2e-05
 Identities = 21/51 (41%), Positives = 32/51 (62%)
 Frame = +3

Query: 108 MSAWRQAGLTYINYSNIAAKVLRRSLKQEFRAEALKRDESHVRVTPWANGR 260
           M AWR AGL Y+ YS IAA+V+R+  K       +K+ ++ ++ T W NG+
Sbjct: 1   MVAWRAAGLNYVRYSQIAAQVVRQCTK---GGANVKKPQATLKTTAWENGK 48


>L07144-2|AAK21439.1|   54|Caenorhabditis elegans Hypothetical
           protein R05D3.6 protein.
          Length = 54

 Score = 45.6 bits (103), Expect = 2e-05
 Identities = 21/51 (41%), Positives = 32/51 (62%)
 Frame = +3

Query: 108 MSAWRQAGLTYINYSNIAAKVLRRSLKQEFRAEALKRDESHVRVTPWANGR 260
           M AWR AGL Y+ YS IAA+V+R+  K       +K+ ++ ++ T W NG+
Sbjct: 1   MVAWRAAGLNYVRYSQIAAQVVRQCTK---GGANVKKPQATLKTTAWENGK 48


>Z78417-12|CAO78731.1|  318|Caenorhabditis elegans Hypothetical
           protein C35C5.10b protein.
          Length = 318

 Score = 28.7 bits (61), Expect = 2.2
 Identities = 15/40 (37%), Positives = 23/40 (57%)
 Frame = -3

Query: 325 IPSSLWNSFLEVPLT*SFSCAGRPLAQGVTLT*DSSRFNA 206
           IP S W +++ +PL  SF+   R +++ V LT  S  F A
Sbjct: 66  IPLSFWAAYMSIPLDCSFTLPTRNVSRYVILTVYSLIFGA 105


>Z78417-11|CAE17739.1|  294|Caenorhabditis elegans Hypothetical
           protein C35C5.10a protein.
          Length = 294

 Score = 28.7 bits (61), Expect = 2.2
 Identities = 15/40 (37%), Positives = 23/40 (57%)
 Frame = -3

Query: 325 IPSSLWNSFLEVPLT*SFSCAGRPLAQGVTLT*DSSRFNA 206
           IP S W +++ +PL  SF+   R +++ V LT  S  F A
Sbjct: 42  IPLSFWAAYMSIPLDCSFTLPTRNVSRYVILTVYSLIFGA 81


>U39999-5|AAA81106.1|  263|Caenorhabditis elegans Hypothetical
           protein F41G3.5 protein.
          Length = 263

 Score = 27.9 bits (59), Expect = 3.8
 Identities = 11/31 (35%), Positives = 17/31 (54%)
 Frame = +3

Query: 24  YFTLLSGCGNQENFNLFLRIKVNKNINKMSA 116
           YF  +  CG  E FN  +   V KN++++ A
Sbjct: 16  YFCRVFFCGKAEKFNFLIMTLVGKNLSELRA 46


>AF039051-4|AAB94264.1|  539|Caenorhabditis elegans Hypothetical
           protein C14C6.6 protein.
          Length = 539

 Score = 27.5 bits (58), Expect = 5.1
 Identities = 13/55 (23%), Positives = 31/55 (56%)
 Frame = +1

Query: 217 VTNLTSESHLGPTDDLHMKRTKSEVPPESCSKVKKE*LTNMHENHQLLIYVELYN 381
           ++NL+S     P +++      S+ P E  ++++   +TN+ ++HQL+  + + N
Sbjct: 79  LSNLSSTEIEDP-EEIMFSYNSSDCPYEDWNQIRTSTITNLKKHHQLMQEMSINN 132


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,888,803
Number of Sequences: 27780
Number of extensions: 168580
Number of successful extensions: 376
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 375
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 376
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 839684522
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)