Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P01_F_K11
         (468 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ855482-1|ABH88169.1|  116|Apis mellifera chemosensory protein ...    21   5.0  
AJ973399-1|CAJ01446.1|  116|Apis mellifera hypothetical protein ...    21   5.0  
AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.        21   8.7  
AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.        21   8.7  
AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.        21   8.7  

>DQ855482-1|ABH88169.1|  116|Apis mellifera chemosensory protein 1
           protein.
          Length = 116

 Score = 21.4 bits (43), Expect = 5.0
 Identities = 9/30 (30%), Positives = 14/30 (46%)
 Frame = -3

Query: 379 CTILHKLIVDDFHACWLTIPSSLWNSFLEV 290
           CT + K  +D     + T     WN F+E+
Sbjct: 78  CTEIQKQNLDKLAEWFTTNEPEKWNHFVEI 107


>AJ973399-1|CAJ01446.1|  116|Apis mellifera hypothetical protein
           protein.
          Length = 116

 Score = 21.4 bits (43), Expect = 5.0
 Identities = 9/30 (30%), Positives = 14/30 (46%)
 Frame = -3

Query: 379 CTILHKLIVDDFHACWLTIPSSLWNSFLEV 290
           CT + K  +D     + T     WN F+E+
Sbjct: 78  CTEIQKQNLDKLAEWFTTNEPEKWNHFVEI 107


>AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 20.6 bits (41), Expect = 8.7
 Identities = 7/20 (35%), Positives = 12/20 (60%)
 Frame = +3

Query: 81  IKVNKNINKMSAWRQAGLTY 140
           + VNK+ NK + W++    Y
Sbjct: 690 VSVNKSWNKWNDWQETQNNY 709


>AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 20.6 bits (41), Expect = 8.7
 Identities = 7/20 (35%), Positives = 12/20 (60%)
 Frame = +3

Query: 81  IKVNKNINKMSAWRQAGLTY 140
           + VNK+ NK + W++    Y
Sbjct: 690 VSVNKSWNKWNDWQETQNNY 709


>AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 20.6 bits (41), Expect = 8.7
 Identities = 7/20 (35%), Positives = 12/20 (60%)
 Frame = +3

Query: 81  IKVNKNINKMSAWRQAGLTY 140
           + VNK+ NK + W++    Y
Sbjct: 690 VSVNKSWNKWNDWQETQNNY 709


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 107,808
Number of Sequences: 438
Number of extensions: 1943
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 12559158
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)