Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P01_F_K09
(729 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ325075-1|ABD14089.1| 181|Apis mellifera complementary sex det... 24 1.3
DQ325074-1|ABD14088.1| 181|Apis mellifera complementary sex det... 24 1.3
DQ325073-1|ABD14087.1| 181|Apis mellifera complementary sex det... 24 1.3
DQ325072-1|ABD14086.1| 181|Apis mellifera complementary sex det... 24 1.3
DQ325071-1|ABD14085.1| 181|Apis mellifera complementary sex det... 24 1.3
DQ325070-1|ABD14084.1| 181|Apis mellifera complementary sex det... 24 1.3
DQ325069-1|ABD14083.1| 181|Apis mellifera complementary sex det... 24 1.3
DQ325068-1|ABD14082.1| 181|Apis mellifera complementary sex det... 24 1.3
AY569696-1|AAS86649.1| 414|Apis mellifera complementary sex det... 24 1.3
AY569695-1|AAS86648.1| 414|Apis mellifera complementary sex det... 24 1.3
AF084556-1|AAC71015.1| 652|Apis mellifera pipsqueak protein. 22 5.2
>DQ325075-1|ABD14089.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 24.2 bits (50), Expect = 1.3
Identities = 13/48 (27%), Positives = 22/48 (45%)
Frame = -3
Query: 517 PHIVIQQNSIKKRMQFNRIYNLSLKVN*KLFV*KIHTPKKIAIPLTLF 374
P I+ NS+ +N YN K N I+ ++I IP+ ++
Sbjct: 79 PKIISNNNSLSNNYNYNNNYNNYNKHNYNKLYYNINYIEQIPIPVPVY 126
>DQ325074-1|ABD14088.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 24.2 bits (50), Expect = 1.3
Identities = 13/48 (27%), Positives = 22/48 (45%)
Frame = -3
Query: 517 PHIVIQQNSIKKRMQFNRIYNLSLKVN*KLFV*KIHTPKKIAIPLTLF 374
P I+ NS+ +N YN K N I+ ++I IP+ ++
Sbjct: 79 PKIISNNNSLSNNYNYNNNYNNYNKHNYNKLYYNINYIEQIPIPVPVY 126
>DQ325073-1|ABD14087.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 24.2 bits (50), Expect = 1.3
Identities = 13/48 (27%), Positives = 22/48 (45%)
Frame = -3
Query: 517 PHIVIQQNSIKKRMQFNRIYNLSLKVN*KLFV*KIHTPKKIAIPLTLF 374
P I+ NS+ +N YN K N I+ ++I IP+ ++
Sbjct: 79 PKIISNNNSLSNNYNYNNNYNNYNKHNYNKLYYNINYIEQIPIPVPVY 126
>DQ325072-1|ABD14086.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 24.2 bits (50), Expect = 1.3
Identities = 13/48 (27%), Positives = 22/48 (45%)
Frame = -3
Query: 517 PHIVIQQNSIKKRMQFNRIYNLSLKVN*KLFV*KIHTPKKIAIPLTLF 374
P I+ NS+ +N YN K N I+ ++I IP+ ++
Sbjct: 79 PKIISNNNSLSNNYNYNNNYNNYNKHNYNKLYYNINYIEQIPIPVPVY 126
>DQ325071-1|ABD14085.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 24.2 bits (50), Expect = 1.3
Identities = 13/48 (27%), Positives = 22/48 (45%)
Frame = -3
Query: 517 PHIVIQQNSIKKRMQFNRIYNLSLKVN*KLFV*KIHTPKKIAIPLTLF 374
P I+ NS+ +N YN K N I+ ++I IP+ ++
Sbjct: 79 PKIISNNNSLSNNYNYNNNYNNYNKHNYNKLYYNINYIEQIPIPVPVY 126
>DQ325070-1|ABD14084.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 24.2 bits (50), Expect = 1.3
Identities = 13/48 (27%), Positives = 22/48 (45%)
Frame = -3
Query: 517 PHIVIQQNSIKKRMQFNRIYNLSLKVN*KLFV*KIHTPKKIAIPLTLF 374
P I+ NS+ +N YN K N I+ ++I IP+ ++
Sbjct: 79 PKIISNNNSLSNNYNYNNNYNNYNKHNYNKLYYNINYIEQIPIPVPVY 126
>DQ325069-1|ABD14083.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 24.2 bits (50), Expect = 1.3
Identities = 13/48 (27%), Positives = 22/48 (45%)
Frame = -3
Query: 517 PHIVIQQNSIKKRMQFNRIYNLSLKVN*KLFV*KIHTPKKIAIPLTLF 374
P I+ NS+ +N YN K N I+ ++I IP+ ++
Sbjct: 79 PKIISNNNSLSNNYNYNNNYNNYNKHNYNKLYYNINYIEQIPIPVPVY 126
>DQ325068-1|ABD14082.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 24.2 bits (50), Expect = 1.3
Identities = 13/48 (27%), Positives = 22/48 (45%)
Frame = -3
Query: 517 PHIVIQQNSIKKRMQFNRIYNLSLKVN*KLFV*KIHTPKKIAIPLTLF 374
P I+ NS+ +N YN K N I+ ++I IP+ ++
Sbjct: 79 PKIISNNNSLSNNYNYNNNYNNYNKHNYNKLYYNINYIEQIPIPVPVY 126
>AY569696-1|AAS86649.1| 414|Apis mellifera complementary sex
determiner protein.
Length = 414
Score = 24.2 bits (50), Expect = 1.3
Identities = 13/48 (27%), Positives = 22/48 (45%)
Frame = -3
Query: 517 PHIVIQQNSIKKRMQFNRIYNLSLKVN*KLFV*KIHTPKKIAIPLTLF 374
P I+ NS+ +N YN K N I+ ++I IP+ ++
Sbjct: 312 PKIISNNNSLSNNYNYNNNYNNYNKHNYNKLYYNINYIEQIPIPVPVY 359
>AY569695-1|AAS86648.1| 414|Apis mellifera complementary sex
determiner protein.
Length = 414
Score = 24.2 bits (50), Expect = 1.3
Identities = 13/48 (27%), Positives = 22/48 (45%)
Frame = -3
Query: 517 PHIVIQQNSIKKRMQFNRIYNLSLKVN*KLFV*KIHTPKKIAIPLTLF 374
P I+ NS+ +N YN K N I+ ++I IP+ ++
Sbjct: 312 PKIISNNNSLSNNYNYNNNYNNYNKHNYNKLYYNINYIEQIPIPVPVY 359
>AF084556-1|AAC71015.1| 652|Apis mellifera pipsqueak protein.
Length = 652
Score = 22.2 bits (45), Expect = 5.2
Identities = 22/62 (35%), Positives = 30/62 (48%), Gaps = 8/62 (12%)
Frame = -1
Query: 702 VRVTRVCDGEC--AHSVVFSACCS*FNVVPAVVVNTC-----LS*EGVVFN-LRFPAKVK 547
V VT C+ AH VV SAC S F + ++ N C + + V FN L+F +
Sbjct: 36 VDVTLACNEASLKAHKVVLSACSSYFQKL--LLSNPCKHPTIIMPQDVCFNDLKFIIEFV 93
Query: 546 YR 541
YR
Sbjct: 94 YR 95
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 192,733
Number of Sequences: 438
Number of extensions: 4083
Number of successful extensions: 13
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 22657590
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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