Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P01_F_K08
         (562 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U50313-5|AAA92329.1|  270|Caenorhabditis elegans Palmitoyl prote...   171   4e-43
AY691522-1|AAU01161.1|  254|Caenorhabditis elegans palmitoyl pro...   170   5e-43
Z93778-3|CAB07846.1|  446|Caenorhabditis elegans Hypothetical pr...    33   0.19 
U23176-6|AAC46718.1| 1374|Caenorhabditis elegans Hypothetical pr...    29   2.3  
AF098992-6|AAC67456.2|  182|Caenorhabditis elegans Hypothetical ...    29   3.0  
Z83223-2|CAB05715.1|  130|Caenorhabditis elegans Hypothetical pr...    27   9.2  
AL021481-2|CAA16334.1|  595|Caenorhabditis elegans Hypothetical ...    27   9.2  
AF078783-1|AAK82900.1|  382|Caenorhabditis elegans Hypothetical ...    27   9.2  

>U50313-5|AAA92329.1|  270|Caenorhabditis elegans Palmitoyl protein
           thioesteraseprotein 1 protein.
          Length = 270

 Score =  171 bits (415), Expect = 4e-43
 Identities = 81/176 (46%), Positives = 111/176 (63%)
 Frame = +3

Query: 30  GATCCMSFXLGSFKIFLAQHIPGVXVLSLQIGNNTVEAFENGYFMXPNLQVEYVCEXLAA 209
           G  CC    +GS K    + IPGV V SLQ+G++  +  E+G++   N  V   C  +  
Sbjct: 6   GDCCCNPLSMGSVKKLFEEQIPGVYVHSLQLGSSITKDIEHGFYANTNELVYMACIKIKN 65

Query: 210 DPKLSNGFNVMGFSQGCQFIRAVVQRCGHKLPQIKNMVSLGGQHQGIYGIPHCGALRHET 389
           DP+L NG+N +GFSQG QF+RAV QRC +  P +KN+VS+GGQHQG++G P+C    +  
Sbjct: 66  DPELKNGYNAIGFSQGAQFLRAVAQRCPN--PPMKNLVSVGGQHQGVFGAPYCIG-DNIM 122

Query: 390 CDDVRKLLNYAAYNSWVQNSLVQATYWHDPLXERTYEANSVFLADINNVRTVNXTY 557
           C+ VR+L++  AY  +VQ  +VQA YWHDP     Y+  S+FLADINN    N TY
Sbjct: 123 CNGVRRLIDLGAYLPFVQKRVVQAQYWHDPNQVEEYKKRSIFLADINNENNNNPTY 178


>AY691522-1|AAU01161.1|  254|Caenorhabditis elegans palmitoyl
           protein thioesterase protein.
          Length = 254

 Score =  170 bits (414), Expect = 5e-43
 Identities = 81/176 (46%), Positives = 111/176 (63%)
 Frame = +3

Query: 30  GATCCMSFXLGSFKIFLAQHIPGVXVLSLQIGNNTVEAFENGYFMXPNLQVEYVCEXLAA 209
           G  CC    +GS K    + IPGV V SLQ+G++  +  E+G++   N  V   C  +  
Sbjct: 6   GDCCCNPLSMGSVKKLFEEQIPGVYVHSLQLGSSITKDIEHGFYANTNELVYMACIKIKN 65

Query: 210 DPKLSNGFNVMGFSQGCQFIRAVVQRCGHKLPQIKNMVSLGGQHQGIYGIPHCGALRHET 389
           DP+L NG+N +GFSQG QF+RAV QRC +  P +KN+VS+GGQHQG++G P+C    +  
Sbjct: 66  DPELKNGYNAIGFSQGAQFLRAVAQRCPN--PPMKNLVSVGGQHQGVFGAPYCIG-DNIM 122

Query: 390 CDDVRKLLNYAAYNSWVQNSLVQATYWHDPLXERTYEANSVFLADINNVRTVNXTY 557
           C+ VR+L++  AY  +VQ  +VQA YWHDP     Y+  S+FLADINN    N TY
Sbjct: 123 CNGVRRLIDLGAYLPFVQKRVVQAQYWHDPNQVXEYKKRSIFLADINNENNNNPTY 178


>Z93778-3|CAB07846.1|  446|Caenorhabditis elegans Hypothetical
           protein C31H5.6 protein.
          Length = 446

 Score = 32.7 bits (71), Expect = 0.19
 Identities = 20/66 (30%), Positives = 33/66 (50%)
 Frame = +3

Query: 144 FENGYFMXPNLQVEYVCEXLAADPKLSNGFNVMGFSQGCQFIRAVVQRCGHKLPQIKNMV 323
           F++  +   ++ VEY  + +     LS   N++G  QG  F   +V     + PQIK +V
Sbjct: 202 FKDLPYKLEDVDVEYFLKPIEFVLGLSYTTNMLGI-QGVSFGATIVDLLSTRYPQIKAVV 260

Query: 324 SLGGQH 341
           S+ G H
Sbjct: 261 SINGPH 266


>U23176-6|AAC46718.1| 1374|Caenorhabditis elegans Hypothetical
           protein F21H12.6 protein.
          Length = 1374

 Score = 29.1 bits (62), Expect = 2.3
 Identities = 25/97 (25%), Positives = 43/97 (44%), Gaps = 8/97 (8%)
 Frame = +3

Query: 93  PGVXVLSLQIGNNTVEAFENG------YFMXPNLQVEYVCEXLAADPKLSNGFNVMGFSQ 254
           PG  +LSL IG++ + A E G      + M   L V+ +         L +   V+  ++
Sbjct: 337 PGAKILSLNIGDHRLGAMETGQAMTRAFNMCAELNVDIINMSFGEGTHLPDVGRVIEEAR 396

Query: 255 GCQFIRAVVQRC--GHKLPQIKNMVSLGGQHQGIYGI 359
                R V+  C  G++ P +  + + GG   G+ GI
Sbjct: 397 RLINRRGVIYVCSAGNQGPALSTVGAPGGTTTGVIGI 433


>AF098992-6|AAC67456.2|  182|Caenorhabditis elegans Hypothetical
           protein F53C3.5 protein.
          Length = 182

 Score = 28.7 bits (61), Expect = 3.0
 Identities = 11/32 (34%), Positives = 15/32 (46%)
 Frame = +3

Query: 6   CLSFILCFGATCCMSFXLGSFKIFLAQHIPGV 101
           C  +  C G TCC SF      IF+   + G+
Sbjct: 91  CAEYTYCCGMTCCPSFSDTQLLIFIVLLVAGI 122


>Z83223-2|CAB05715.1|  130|Caenorhabditis elegans Hypothetical
           protein E01G4.3 protein.
          Length = 130

 Score = 27.1 bits (57), Expect = 9.2
 Identities = 10/26 (38%), Positives = 17/26 (65%)
 Frame = -1

Query: 88  CCARKILKEPRXKDMQHVAPKQRMKD 11
           CCA +  K+P+ K  +H   K+R++D
Sbjct: 59  CCAEEDEKKPKRKHQEHPEFKKRIED 84


>AL021481-2|CAA16334.1|  595|Caenorhabditis elegans Hypothetical
           protein Y43F4B.5a protein.
          Length = 595

 Score = 27.1 bits (57), Expect = 9.2
 Identities = 15/37 (40%), Positives = 21/37 (56%)
 Frame = +3

Query: 417 YAAYNSWVQNSLVQATYWHDPLXERTYEANSVFLADI 527
           YA YN +  + LV++TYW  P  E T +  S   AD+
Sbjct: 451 YALYNRYGFH-LVRSTYWMVPAPEVTKKLFSTLRADL 486


>AF078783-1|AAK82900.1|  382|Caenorhabditis elegans Hypothetical
           protein H10E21.2 protein.
          Length = 382

 Score = 27.1 bits (57), Expect = 9.2
 Identities = 10/23 (43%), Positives = 13/23 (56%)
 Frame = +3

Query: 6   CLSFILCFGATCCMSFXLGSFKI 74
           C+S +LC+G  C  SF    F I
Sbjct: 133 CISAVLCYGVDCSRSFDAMVFNI 155


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,718,441
Number of Sequences: 27780
Number of extensions: 259581
Number of successful extensions: 543
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 530
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 539
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1155524042
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)