Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P01_F_K06
(500 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P49630 Cluster: 60S ribosomal protein L36 (Protein minu... 150 2e-35
UniRef50_Q9Y3U8 Cluster: 60S ribosomal protein L36; n=47; Eutele... 128 5e-29
UniRef50_Q1G198 Cluster: 60S ribosomal protein L36; n=1; Leptino... 128 9e-29
UniRef50_P49181 Cluster: 60S ribosomal protein L36; n=18; Fungi/... 104 1e-21
UniRef50_A2ZZF6 Cluster: 60S ribosomal protein L36; n=9; Eukaryo... 100 4e-20
UniRef50_O80929 Cluster: 60S ribosomal protein L36-1; n=18; Euka... 99 6e-20
UniRef50_Q5KEE1 Cluster: 60S ribosomal protein L36; n=2; Dikarya... 89 5e-17
UniRef50_Q92365 Cluster: 60S ribosomal protein L36-A; n=2; Schiz... 85 6e-16
UniRef50_A7ATP0 Cluster: 60S ribosomal protein L36; n=3; Piropla... 84 1e-15
UniRef50_Q7XY66 Cluster: Putative 60S ribosomal protein L36; n=1... 83 5e-15
UniRef50_UPI0000604754 Cluster: PREDICTED: similar to rat riboso... 78 1e-13
UniRef50_P05745 Cluster: 60S ribosomal protein L36-A; n=26; Fung... 77 3e-13
UniRef50_UPI00005A004D Cluster: PREDICTED: similar to ribosomal ... 74 2e-12
UniRef50_UPI0000EBDDF6 Cluster: PREDICTED: similar to rat riboso... 73 4e-12
UniRef50_Q7R9S3 Cluster: 60S ribosomal protein L36; n=2; Plasmod... 68 1e-10
UniRef50_Q8I713 Cluster: 60S Ribosomal protein L36, putative; n=... 68 1e-10
UniRef50_P52866 Cluster: 60S ribosomal protein L36; n=13; Eukary... 68 1e-10
UniRef50_A0DT55 Cluster: 60S ribosomal protein L36; n=5; Oligohy... 65 1e-09
UniRef50_Q55AQ9 Cluster: 60S ribosomal protein L36; n=2; Dictyos... 64 2e-09
UniRef50_Q9BYF3 Cluster: 60S ribosomal protein L36; n=5; Amniota... 64 2e-09
UniRef50_Q38CY6 Cluster: 60S ribosomal protein L36; n=2; Trypano... 62 5e-09
UniRef50_Q7QRE6 Cluster: 60S ribosomal protein L36; n=1; Giardia... 61 1e-08
UniRef50_Q4QCE1 Cluster: 60S ribosomal protein l36, putative; n=... 60 4e-08
UniRef50_A2F3E0 Cluster: Ribosomal protein L36e, putative; n=4; ... 60 4e-08
UniRef50_Q16KP4 Cluster: 60S ribosomal protein L36; n=1; Aedes a... 57 2e-07
UniRef50_A1BQ89 Cluster: 60S ribosomal protein L36; n=1; Strongy... 48 1e-04
UniRef50_UPI00015538C3 Cluster: PREDICTED: similar to 60S riboso... 47 2e-04
UniRef50_Q8SRP1 Cluster: 60S RIBOSOMAL PROTEIN L36; n=1; Encepha... 47 2e-04
UniRef50_Q8S8Z4 Cluster: 60S ribosomal protein L36 homolog; n=1;... 45 8e-04
UniRef50_O15623 Cluster: 60S ribosomal protein L36; n=3; Entamoe... 42 0.006
UniRef50_Q9AW14 Cluster: 60S ribosomal protein L36; n=1; Guillar... 39 0.073
UniRef50_UPI0000D569F8 Cluster: PREDICTED: similar to CG8461-PA;... 36 0.68
UniRef50_Q9U919 Cluster: PTGT-4 protein; n=1; Trypanosoma brucei... 35 1.2
UniRef50_UPI000038D597 Cluster: COG2319: FOG: WD40 repeat; n=2; ... 34 2.1
UniRef50_A1CYX3 Cluster: 60S ribosomal protein L24b; n=4; Euroti... 34 2.1
UniRef50_A2BM16 Cluster: Predicted Rad50; n=1; Hyperthermus buty... 33 2.7
UniRef50_Q2FTZ5 Cluster: Putative uncharacterized protein; n=1; ... 32 8.3
>UniRef50_P49630 Cluster: 60S ribosomal protein L36 (Protein
minute(1)1B); n=18; Coelomata|Rep: 60S ribosomal protein
L36 (Protein minute(1)1B) - Drosophila melanogaster
(Fruit fly)
Length = 115
Score = 150 bits (363), Expect = 2e-35
Identities = 73/105 (69%), Positives = 86/105 (81%)
Frame = +3
Query: 60 FAIAVGLLKGHKTTXISAGRKGLTXKAIXIRPARLKGLQTKHSKFVRDLVREVVGHAQYE 239
+ +A+GL KGHKT+ I + K +R +RLK +QT+H+KF+RDLVREVVGHA YE
Sbjct: 5 YELAIGLNKGHKTSKIRNVKYTGDKKVKGLRGSRLKNIQTRHTKFMRDLVREVVGHAPYE 64
Query: 240 KRAMELLKVSKDKRALKFLKRRLGTHIRAKRKREELSNVLAQMRK 374
KR MELLKVSKDKRALKFLKRRLGTHIRAKRKREELSN+L Q+RK
Sbjct: 65 KRTMELLKVSKDKRALKFLKRRLGTHIRAKRKREELSNILTQLRK 109
>UniRef50_Q9Y3U8 Cluster: 60S ribosomal protein L36; n=47;
Euteleostomi|Rep: 60S ribosomal protein L36 - Homo
sapiens (Human)
Length = 105
Score = 128 bits (310), Expect = 5e-29
Identities = 69/107 (64%), Positives = 82/107 (76%)
Frame = +3
Query: 54 LXFAIAVGLLKGHKTTXISAGRKGLTXKAIXIRPARLKGLQTKHSKFVRDLVREVVGHAQ 233
L + +AVGL KGHK T K ++ R +R +G TKH+KFVRD++REV G A
Sbjct: 3 LRYPMAVGLNKGHKVT------KNVSKP----RHSRRRGRLTKHTKFVRDMIREVCGFAP 52
Query: 234 YEKRAMELLKVSKDKRALKFLKRRLGTHIRAKRKREELSNVLAQMRK 374
YE+RAMELLKVSKDKRALKF+K+R+GTHIRAKRKREELSNVLA MRK
Sbjct: 53 YERRAMELLKVSKDKRALKFIKKRVGTHIRAKRKREELSNVLAAMRK 99
>UniRef50_Q1G198 Cluster: 60S ribosomal protein L36; n=1;
Leptinotarsa decemlineata|Rep: 60S ribosomal protein L36
- Leptinotarsa decemlineata (Colorado potato beetle)
Length = 84
Score = 128 bits (308), Expect = 9e-29
Identities = 60/74 (81%), Positives = 65/74 (87%)
Frame = +3
Query: 153 PARLKGLQTKHSKFVRDLVREVVGHAQYEKRAMELLKVSKDKRALKFLKRRLGTHIRAKR 332
P RLKG+QTKH+KFVRD++REVVGH EKR ELLKV KDKRALKFLKRRLGTHIRAKR
Sbjct: 6 PERLKGIQTKHTKFVRDIIREVVGHXPXEKRXXELLKVXKDKRALKFLKRRLGTHIRAKR 65
Query: 333 KREELSNVLAQMRK 374
KREELSN+L QM K
Sbjct: 66 KREELSNILTQMGK 79
>UniRef50_P49181 Cluster: 60S ribosomal protein L36; n=18;
Fungi/Metazoa group|Rep: 60S ribosomal protein L36 -
Caenorhabditis elegans
Length = 104
Score = 104 bits (250), Expect = 1e-21
Identities = 55/103 (53%), Positives = 70/103 (67%)
Frame = +3
Query: 66 IAVGLLKGHKTTXISAGRKGLTXKAIXIRPARLKGLQTKHSKFVRDLVREVVGHAQYEKR 245
+AVGL KGH T + + R R KG+ +K +K VR+LVRE+ G A YE+R
Sbjct: 9 LAVGLNKGHAATQLPVKQ----------RQNRHKGVASKKTKIVRELVREITGFAPYERR 58
Query: 246 AMELLKVSKDKRALKFLKRRLGTHIRAKRKREELSNVLAQMRK 374
+E+L++SKDKRALKFLKRR+GTH RAK KREEL NV+ RK
Sbjct: 59 VLEMLRISKDKRALKFLKRRIGTHRRAKGKREELQNVIIAQRK 101
>UniRef50_A2ZZF6 Cluster: 60S ribosomal protein L36; n=9;
Eukaryota|Rep: 60S ribosomal protein L36 - Oryza sativa
subsp. japonica (Rice)
Length = 143
Score = 99.5 bits (237), Expect = 4e-20
Identities = 49/82 (59%), Positives = 60/82 (73%)
Frame = +3
Query: 126 LTXKAIXIRPARLKGLQTKHSKFVRDLVREVVGHAQYEKRAMELLKVSKDKRALKFLKRR 305
+T + + RP+ KG TK FVR L+REVVG A YEKR ELLKV KDKRALK KR+
Sbjct: 20 VTKRELPPRPSDRKGKSTKRVNFVRGLIREVVGFAPYEKRITELLKVGKDKRALKVAKRK 79
Query: 306 LGTHIRAKRKREELSNVLAQMR 371
LGTH RAK+KREE++ V+ +MR
Sbjct: 80 LGTHKRAKKKREEMAGVIRKMR 101
>UniRef50_O80929 Cluster: 60S ribosomal protein L36-1; n=18;
Eukaryota|Rep: 60S ribosomal protein L36-1 - Arabidopsis
thaliana (Mouse-ear cress)
Length = 113
Score = 98.7 bits (235), Expect = 6e-20
Identities = 49/82 (59%), Positives = 60/82 (73%)
Frame = +3
Query: 126 LTXKAIXIRPARLKGLQTKHSKFVRDLVREVVGHAQYEKRAMELLKVSKDKRALKFLKRR 305
+T + + RP KG +K + F+R L+REV G A YEKR ELLKV KDKRALK KR+
Sbjct: 20 VTRRELAPRPNSRKGKTSKRTIFIRKLIREVAGMAPYEKRITELLKVGKDKRALKVAKRK 79
Query: 306 LGTHIRAKRKREELSNVLAQMR 371
LGTH RAKRKREE+S+VL +MR
Sbjct: 80 LGTHKRAKRKREEMSSVLRKMR 101
>UniRef50_Q5KEE1 Cluster: 60S ribosomal protein L36; n=2;
Dikarya|Rep: 60S ribosomal protein L36 - Cryptococcus
neoformans (Filobasidiella neoformans)
Length = 197
Score = 89.0 bits (211), Expect = 5e-17
Identities = 42/75 (56%), Positives = 56/75 (74%)
Frame = +3
Query: 150 RPARLKGLQTKHSKFVRDLVREVVGHAQYEKRAMELLKVSKDKRALKFLKRRLGTHIRAK 329
RP+ KGL+T+ FVR ++REV G + YEKR MELL+ SKDK+A K K+RLGT +R+K
Sbjct: 120 RPSNKKGLKTEKKTFVRSVIREVAGFSPYEKRVMELLRNSKDKKAKKLTKKRLGTLLRSK 179
Query: 330 RKREELSNVLAQMRK 374
RK EELS V+ + R+
Sbjct: 180 RKIEELSAVIVEQRR 194
>UniRef50_Q92365 Cluster: 60S ribosomal protein L36-A; n=2;
Schizosaccharomyces pombe|Rep: 60S ribosomal protein
L36-A - Schizosaccharomyces pombe (Fission yeast)
Length = 99
Score = 85.4 bits (202), Expect = 6e-16
Identities = 44/84 (52%), Positives = 58/84 (69%)
Frame = +3
Query: 120 KGLTXKAIXIRPARLKGLQTKHSKFVRDLVREVVGHAQYEKRAMELLKVSKDKRALKFLK 299
K LT + + RP+R KG +K + FVR +VREV G A YE+R MEL++ S+DKRA K K
Sbjct: 13 KVLTKRQLPERPSRRKGQLSKRTSFVRSIVREVAGFAPYERRVMELIRNSQDKRARKLAK 72
Query: 300 RRLGTHIRAKRKREELSNVLAQMR 371
+RLGT RAK K EEL++V+ R
Sbjct: 73 KRLGTLKRAKGKIEELTSVIQSSR 96
>UniRef50_A7ATP0 Cluster: 60S ribosomal protein L36; n=3;
Piroplasmida|Rep: 60S ribosomal protein L36 - Babesia
bovis
Length = 116
Score = 84.2 bits (199), Expect = 1e-15
Identities = 50/106 (47%), Positives = 65/106 (61%), Gaps = 3/106 (2%)
Frame = +3
Query: 66 IAVGLLKGHKTTXISAGRKGLTXKAIXIRPARLKGLQTKHSKFVRDLVREVVGHAQYEKR 245
IAVGL KGH TT I + +RP+R KGL+TK + V +++REV G A YE+
Sbjct: 16 IAVGLNKGHITTPIPLVKS--------VRPSRKKGLKTKRNALVSEVIREVCGFAPYERH 67
Query: 246 AMELLK---VSKDKRALKFLKRRLGTHIRAKRKREELSNVLAQMRK 374
+EL+K S KRALKF K+RLGT RAK K +E+ V+ RK
Sbjct: 68 MIELIKTGSASAQKRALKFAKKRLGTLRRAKTKNDEMMRVVELQRK 113
>UniRef50_Q7XY66 Cluster: Putative 60S ribosomal protein L36; n=1;
Griffithsia japonica|Rep: Putative 60S ribosomal protein
L36 - Griffithsia japonica (Red alga)
Length = 94
Score = 82.6 bits (195), Expect = 5e-15
Identities = 37/66 (56%), Positives = 49/66 (74%)
Frame = +3
Query: 174 QTKHSKFVRDLVREVVGHAQYEKRAMELLKVSKDKRALKFLKRRLGTHIRAKRKREELSN 353
Q+ + VR ++ EV G A YEKR +ELL++ KDKRALKF K+RLGTH+RAKRKRE+++
Sbjct: 28 QSPRLQVVRSVINEVCGFAPYEKRVIELLRIGKDKRALKFAKKRLGTHLRAKRKREQMAE 87
Query: 354 VLAQMR 371
L R
Sbjct: 88 ALRSKR 93
>UniRef50_UPI0000604754 Cluster: PREDICTED: similar to rat ribosomal
protein L36; n=8; Eutheria|Rep: PREDICTED: similar to
rat ribosomal protein L36 - Mus musculus
Length = 105
Score = 77.8 bits (183), Expect = 1e-13
Identities = 49/103 (47%), Positives = 63/103 (61%)
Frame = +3
Query: 66 IAVGLLKGHKTTXISAGRKGLTXKAIXIRPARLKGLQTKHSKFVRDLVREVVGHAQYEKR 245
+A+GL KGHK K ++ K P RL TKH+KFV+D++REV Y+
Sbjct: 7 MAMGLDKGHKVM------KNIS-KPKHSSPHRLL---TKHTKFVQDMIREVCDFMSYDWC 56
Query: 246 AMELLKVSKDKRALKFLKRRLGTHIRAKRKREELSNVLAQMRK 374
+ L KVS DK A KF+K+R+G HI KRK EELS V+A MRK
Sbjct: 57 TVVLPKVSNDKCAFKFIKKRVGMHIHTKRKWEELSIVIAAMRK 99
>UniRef50_P05745 Cluster: 60S ribosomal protein L36-A; n=26;
Fungi/Metazoa group|Rep: 60S ribosomal protein L36-A -
Saccharomyces cerevisiae (Baker's yeast)
Length = 100
Score = 76.6 bits (180), Expect = 3e-13
Identities = 43/103 (41%), Positives = 65/103 (63%)
Frame = +3
Query: 66 IAVGLLKGHKTTXISAGRKGLTXKAIXIRPARLKGLQTKHSKFVRDLVREVVGHAQYEKR 245
IA+GL KG K T ++ K ++ K KG + +KFVR LVRE+ G + YE+R
Sbjct: 7 IAIGLNKGKKVTSMTPAPK-ISYK---------KGAASNRTKFVRSLVREIAGLSPYERR 56
Query: 246 AMELLKVSKDKRALKFLKRRLGTHIRAKRKREELSNVLAQMRK 374
++L++ S +KRA K K+RLG+ RAK K EE++N++A R+
Sbjct: 57 LIDLIRNSGEKRARKVAKKRLGSFTRAKAKVEEMNNIIAASRR 99
>UniRef50_UPI00005A004D Cluster: PREDICTED: similar to ribosomal
protein L36; n=1; Canis lupus familiaris|Rep: PREDICTED:
similar to ribosomal protein L36 - Canis familiaris
Length = 107
Score = 73.7 bits (173), Expect = 2e-12
Identities = 33/46 (71%), Positives = 42/46 (91%)
Frame = +3
Query: 237 EKRAMELLKVSKDKRALKFLKRRLGTHIRAKRKREELSNVLAQMRK 374
++RAMELLKVSKDKR L+ +K+R+GTH+RAKR+ EELSNVLA +RK
Sbjct: 56 QRRAMELLKVSKDKRTLRLIKKRVGTHVRAKRETEELSNVLAAIRK 101
>UniRef50_UPI0000EBDDF6 Cluster: PREDICTED: similar to rat ribosomal
protein L36; n=1; Bos taurus|Rep: PREDICTED: similar to
rat ribosomal protein L36 - Bos taurus
Length = 131
Score = 72.9 bits (171), Expect = 4e-12
Identities = 42/88 (47%), Positives = 56/88 (63%), Gaps = 3/88 (3%)
Frame = +3
Query: 120 KGLTXKAIXIRPARLKGLQ--TKHS-KFVRDLVREVVGHAQYEKRAMELLKVSKDKRALK 290
KG + +P GL KH+ +F +D+++EV A E+ A E KVSKDK+ALK
Sbjct: 18 KGQKGTKVMTQPRHSCGLGHLIKHTTEFSQDVIQEVFSFALNEQHATEQFKVSKDKQALK 77
Query: 291 FLKRRLGTHIRAKRKREELSNVLAQMRK 374
F+++ LGTHI AKRK ELSNVLA R+
Sbjct: 78 FIQKMLGTHICAKRKARELSNVLATTRE 105
>UniRef50_Q7R9S3 Cluster: 60S ribosomal protein L36; n=2;
Plasmodium|Rep: 60S ribosomal protein L36 - Plasmodium
yoelii yoelii
Length = 113
Score = 68.1 bits (159), Expect = 1e-10
Identities = 40/106 (37%), Positives = 59/106 (55%), Gaps = 3/106 (2%)
Frame = +3
Query: 66 IAVGLLKGHKTTXISAGRKGLTXKAIXIRPARLKGLQTKHSKFVRDLVREVVGHAQYEKR 245
IAVG GH T S +K + K++ K+ + D+VRE+ G + YEKR
Sbjct: 13 IAVGFNSGHIVTKRSV-KKSIKKKSV-----------PKNKDLINDVVREIAGFSPYEKR 60
Query: 246 AMELLKVSKD---KRALKFLKRRLGTHIRAKRKREELSNVLAQMRK 374
+EL+KV KR+LK+ K++LGTH R K KREE+ ++ R+
Sbjct: 61 LIELIKVGTSAATKRSLKYAKKKLGTHKRGKAKREEIQKIVMMQRR 106
>UniRef50_Q8I713 Cluster: 60S Ribosomal protein L36, putative; n=2;
Plasmodium|Rep: 60S Ribosomal protein L36, putative -
Plasmodium falciparum (isolate 3D7)
Length = 130
Score = 67.7 bits (158), Expect = 1e-10
Identities = 30/69 (43%), Positives = 48/69 (69%), Gaps = 3/69 (4%)
Frame = +3
Query: 177 TKHSKFVRDLVREVVGHAQYEKRAMELLKV---SKDKRALKFLKRRLGTHIRAKRKREEL 347
+K + ++D+VRE+ G + YEKR +EL+K+ + KR+LK+ K++LGTH R K KREE+
Sbjct: 56 SKRKELIKDVVREITGFSPYEKRIIELIKIGTSASTKRSLKYAKKKLGTHKRGKAKREEI 115
Query: 348 SNVLAQMRK 374
V+ R+
Sbjct: 116 QKVVILQRR 124
>UniRef50_P52866 Cluster: 60S ribosomal protein L36; n=13;
Eukaryota|Rep: 60S ribosomal protein L36 - Daucus carota
(Carrot)
Length = 106
Score = 67.7 bits (158), Expect = 1e-10
Identities = 34/72 (47%), Positives = 47/72 (65%)
Frame = +3
Query: 126 LTXKAIXIRPARLKGLQTKHSKFVRDLVREVVGHAQYEKRAMELLKVSKDKRALKFLKRR 305
+T K + RP+ KG +K + FVR+L+REV G YEKR ELLKV KDKRALK + +
Sbjct: 20 VTKKELAPRPSDRKGKTSKRTHFVRNLIREVAGFXPYEKRITELLKVGKDKRALKVRQEK 79
Query: 306 LGTHIRAKRKRE 341
+G H + ++ E
Sbjct: 80 VG-HSQESKEEE 90
>UniRef50_A0DT55 Cluster: 60S ribosomal protein L36; n=5;
Oligohymenophorea|Rep: 60S ribosomal protein L36 -
Paramecium tetraurelia
Length = 110
Score = 64.9 bits (151), Expect = 1e-09
Identities = 45/106 (42%), Positives = 61/106 (57%), Gaps = 3/106 (2%)
Frame = +3
Query: 66 IAVGLLKGHKTTXISAGRKGLTXKAIXIRPARLKGLQTKHSKFVRDLVREVVGHAQYEKR 245
IAVGL +G T+ LT K + RP++ KG K VR +++EV G + YEKR
Sbjct: 6 IAVGLNRGFITSS-------LTKKQLRRRPSQRKGTLGKRVLSVRKVIQEVAGLSPYEKR 58
Query: 246 AMELLKVS--KD-KRALKFLKRRLGTHIRAKRKREELSNVLAQMRK 374
+EL K + KD K+A K +RLGT+ R KRK E + N+ MRK
Sbjct: 59 IIELFKTNQPKDLKKAGKLAAKRLGTNRRGKRKIELVQNLYRAMRK 104
>UniRef50_Q55AQ9 Cluster: 60S ribosomal protein L36; n=2;
Dictyostelium discoideum|Rep: 60S ribosomal protein L36
- Dictyostelium discoideum AX4
Length = 105
Score = 64.1 bits (149), Expect = 2e-09
Identities = 29/64 (45%), Positives = 44/64 (68%)
Frame = +3
Query: 165 KGLQTKHSKFVRDLVREVVGHAQYEKRAMELLKVSKDKRALKFLKRRLGTHIRAKRKREE 344
K + TK +RD++RE+ G + YE+R ELLK DKRALK K+RLG+ K+KR++
Sbjct: 35 KQVVTKRVAAIRDVIREISGFSPYERRVSELLKSGLDKRALKVAKKRLGSIQAGKKKRDD 94
Query: 345 LSNV 356
++N+
Sbjct: 95 IANI 98
>UniRef50_Q9BYF3 Cluster: 60S ribosomal protein L36; n=5;
Amniota|Rep: 60S ribosomal protein L36 - Homo sapiens
(Human)
Length = 32
Score = 63.7 bits (148), Expect = 2e-09
Identities = 29/32 (90%), Positives = 32/32 (100%)
Frame = +3
Query: 258 LKVSKDKRALKFLKRRLGTHIRAKRKREELSN 353
LKVSKDKRALKF+K+R+GTHIRAKRKREELSN
Sbjct: 1 LKVSKDKRALKFIKKRVGTHIRAKRKREELSN 32
>UniRef50_Q38CY6 Cluster: 60S ribosomal protein L36; n=2;
Trypanosoma brucei|Rep: 60S ribosomal protein L36 -
Trypanosoma brucei
Length = 109
Score = 62.5 bits (145), Expect = 5e-09
Identities = 35/96 (36%), Positives = 52/96 (54%), Gaps = 2/96 (2%)
Frame = +3
Query: 93 KTTXISAGRKGLTXKAIXIRPARLKGLQTKHSKF--VRDLVREVVGHAQYEKRAMELLKV 266
+T I+ KG RP+ H K V+ ++ ++VG + E+R ELL+V
Sbjct: 12 RTGIIAGFNKGYKTTRRARRPSSNDRYALPHKKLRAVKAIISDLVGFSPMERRVQELLRV 71
Query: 267 SKDKRALKFLKRRLGTHIRAKRKREELSNVLAQMRK 374
KDKRALKF K+RLG+ AK++R ++ L Q K
Sbjct: 72 GKDKRALKFCKKRLGSIKAAKKRRAKVEEALRQQTK 107
>UniRef50_Q7QRE6 Cluster: 60S ribosomal protein L36; n=1; Giardia
lamblia ATCC 50803|Rep: 60S ribosomal protein L36 -
Giardia lamblia ATCC 50803
Length = 90
Score = 61.3 bits (142), Expect = 1e-08
Identities = 26/56 (46%), Positives = 41/56 (73%)
Frame = +3
Query: 183 HSKFVRDLVREVVGHAQYEKRAMELLKVSKDKRALKFLKRRLGTHIRAKRKREELS 350
H +FV+ +++E G A YE +ELL+++KD+ AL++ K+RLG RAK KR++LS
Sbjct: 29 HQEFVKSIIQECTGMAPYEMHIIELLRMNKDRHALRYAKKRLGNIKRAKAKRDQLS 84
>UniRef50_Q4QCE1 Cluster: 60S ribosomal protein l36, putative; n=9;
Trypanosomatidae|Rep: 60S ribosomal protein l36,
putative - Leishmania major
Length = 105
Score = 59.7 bits (138), Expect = 4e-08
Identities = 27/65 (41%), Positives = 41/65 (63%)
Frame = +3
Query: 180 KHSKFVRDLVREVVGHAQYEKRAMELLKVSKDKRALKFLKRRLGTHIRAKRKREELSNVL 359
KH + V+ ++ ++VG + EKR E L+V K+KRALK+ K+RLG AK+KR ++ L
Sbjct: 38 KHLRAVKAIIADLVGLSPLEKRVQEFLRVGKEKRALKYCKKRLGDFTAAKKKRSKMEEAL 97
Query: 360 AQMRK 374
K
Sbjct: 98 RHATK 102
>UniRef50_A2F3E0 Cluster: Ribosomal protein L36e, putative; n=4;
Trichomonas vaginalis G3|Rep: Ribosomal protein L36e,
putative - Trichomonas vaginalis G3
Length = 93
Score = 59.7 bits (138), Expect = 4e-08
Identities = 30/75 (40%), Positives = 45/75 (60%), Gaps = 2/75 (2%)
Frame = +3
Query: 147 IRPARLKGLQT--KHSKFVRDLVREVVGHAQYEKRAMELLKVSKDKRALKFLKRRLGTHI 320
+ P R GL + K F R +V E+VG YE+ M+L+K+ + + A +FLK+RLGTH
Sbjct: 11 LAPKRECGLHSSGKRVNFARKIVHELVGWQPYERHTMDLIKIERRRAARQFLKKRLGTHR 70
Query: 321 RAKRKREELSNVLAQ 365
RA +K L V+ +
Sbjct: 71 RAMKKLNTLEEVVQE 85
>UniRef50_Q16KP4 Cluster: 60S ribosomal protein L36; n=1; Aedes
aegypti|Rep: 60S ribosomal protein L36 - Aedes aegypti
(Yellowfever mosquito)
Length = 86
Score = 57.2 bits (132), Expect = 2e-07
Identities = 30/59 (50%), Positives = 42/59 (71%)
Frame = +3
Query: 150 RPARLKGLQTKHSKFVRDLVREVVGHAQYEKRAMELLKVSKDKRALKFLKRRLGTHIRA 326
R +R +QTK +K VRDL+ EVV HA ++K+ M+LLKV +DK AL+F+ +HIRA
Sbjct: 30 RLSRTNEIQTKLTKLVRDLIHEVVVHATFKKKDMQLLKVFQDKLALRFMSG--PSHIRA 86
>UniRef50_A1BQ89 Cluster: 60S ribosomal protein L36; n=1;
Strongyloides ratti|Rep: 60S ribosomal protein L36 -
Strongyloides ratti
Length = 91
Score = 48.0 bits (109), Expect = 1e-04
Identities = 24/47 (51%), Positives = 31/47 (65%)
Frame = +3
Query: 126 LTXKAIXIRPARLKGLQTKHSKFVRDLVREVVGHAQYEKRAMELLKV 266
+T A +R R +G TK +K VR+LVRE+ G A YE+R MELL V
Sbjct: 20 VTKNARKMRQNRKRGAATKKTKVVRELVREITGFAPYERRMMELLLV 66
>UniRef50_UPI00015538C3 Cluster: PREDICTED: similar to 60S ribosomal
protein L36; n=1; Mus musculus|Rep: PREDICTED: similar
to 60S ribosomal protein L36 - Mus musculus
Length = 129
Score = 47.2 bits (107), Expect = 2e-04
Identities = 32/76 (42%), Positives = 42/76 (55%)
Frame = +3
Query: 54 LXFAIAVGLLKGHKTTXISAGRKGLTXKAIXIRPARLKGLQTKHSKFVRDLVREVVGHAQ 233
L + +AVGL KGHK +R ++ G TKH+KF+ + RE+ G A
Sbjct: 61 LHYPMAVGLNKGHK-----------------VRHSQCHGSLTKHTKFMWGVNREMCGFAS 103
Query: 234 YEKRAMELLKVSKDKR 281
YE RA ELLKVSK K+
Sbjct: 104 YEWRATELLKVSKRKK 119
>UniRef50_Q8SRP1 Cluster: 60S RIBOSOMAL PROTEIN L36; n=1;
Encephalitozoon cuniculi|Rep: 60S RIBOSOMAL PROTEIN L36
- Encephalitozoon cuniculi
Length = 107
Score = 47.2 bits (107), Expect = 2e-04
Identities = 24/65 (36%), Positives = 42/65 (64%), Gaps = 1/65 (1%)
Frame = +3
Query: 174 QTKHSKFVRDLVR-EVVGHAQYEKRAMELLKVSKDKRALKFLKRRLGTHIRAKRKREELS 350
+T+ S+F+ V E+ G + EK+A+ LL+ + +A K L++RLG+H RA K E+L+
Sbjct: 42 ETQESRFLAAAVADEISGLSPLEKKAISLLEAKNNNKAQKLLRKRLGSHKRAVAKVEKLA 101
Query: 351 NVLAQ 365
+L +
Sbjct: 102 RMLLE 106
>UniRef50_Q8S8Z4 Cluster: 60S ribosomal protein L36 homolog; n=1;
Allium cepa|Rep: 60S ribosomal protein L36 homolog -
Allium cepa (Onion)
Length = 64
Score = 45.2 bits (102), Expect = 8e-04
Identities = 22/36 (61%), Positives = 28/36 (77%)
Frame = +3
Query: 264 VSKDKRALKFLKRRLGTHIRAKRKREELSNVLAQMR 371
V+K + L+ R+LGTH RAKRKREE+SNVL +MR
Sbjct: 20 VTKRELPLRPSSRKLGTHKRAKRKREEMSNVLRKMR 55
>UniRef50_O15623 Cluster: 60S ribosomal protein L36; n=3; Entamoeba
histolytica|Rep: 60S ribosomal protein L36 - Entamoeba
histolytica
Length = 103
Score = 42.3 bits (95), Expect = 0.006
Identities = 23/66 (34%), Positives = 34/66 (51%)
Frame = +3
Query: 177 TKHSKFVRDLVREVVGHAQYEKRAMELLKVSKDKRALKFLKRRLGTHIRAKRKREELSNV 356
TK V D++RE G YE+ M+LL+ DK+AL + K+ + + E SNV
Sbjct: 25 TKRKHVVNDVIREACGFPAYERHMMDLLRRGLDKKALNYAKKTSWYTQKRTCQAEMKSNV 84
Query: 357 LAQMRK 374
L + K
Sbjct: 85 LLEAIK 90
>UniRef50_Q9AW14 Cluster: 60S ribosomal protein L36; n=1; Guillardia
theta|Rep: 60S ribosomal protein L36 - Guillardia theta
(Cryptomonas phi)
Length = 75
Score = 38.7 bits (86), Expect = 0.073
Identities = 18/63 (28%), Positives = 38/63 (60%), Gaps = 1/63 (1%)
Frame = +3
Query: 174 QTKHSKF-VRDLVREVVGHAQYEKRAMELLKVSKDKRALKFLKRRLGTHIRAKRKREELS 350
+T KF + ++ G ++EK+ +K+ +++ALK K++LG RAK+K + ++
Sbjct: 9 KTNFKKFNINVVLTSTFGLNEFEKKITNYIKLGYEQKALKMSKKKLGNLQRAKKKIDSIN 68
Query: 351 NVL 359
++L
Sbjct: 69 HIL 71
>UniRef50_UPI0000D569F8 Cluster: PREDICTED: similar to CG8461-PA;
n=1; Tribolium castaneum|Rep: PREDICTED: similar to
CG8461-PA - Tribolium castaneum
Length = 235
Score = 35.5 bits (78), Expect = 0.68
Identities = 21/56 (37%), Positives = 33/56 (58%)
Frame = +3
Query: 180 KHSKFVRDLVREVVGHAQYEKRAMELLKVSKDKRALKFLKRRLGTHIRAKRKREEL 347
K KFV DL + Q + + ++ LK ++DK+ +KF+ RRL IR + K+E L
Sbjct: 112 KDYKFVNDLRK------QEKTQLLKQLKETEDKKKIKFVIRRLENQIREEEKKERL 161
>UniRef50_Q9U919 Cluster: PTGT-4 protein; n=1; Trypanosoma
brucei|Rep: PTGT-4 protein - Trypanosoma brucei
Length = 508
Score = 34.7 bits (76), Expect = 1.2
Identities = 17/40 (42%), Positives = 22/40 (55%)
Frame = -3
Query: 405 NGDGDEPGRLPSSSERARC*VLHASSWRGCVCPIVASRTS 286
+G GD P + P SS + RC L SSWR I +RT+
Sbjct: 99 HGKGDRPSQKPKSSSQKRCRHLSGSSWREPRRTIAPARTA 138
>UniRef50_UPI000038D597 Cluster: COG2319: FOG: WD40 repeat; n=2;
Nostoc punctiforme PCC 73102|Rep: COG2319: FOG: WD40
repeat - Nostoc punctiforme PCC 73102
Length = 1174
Score = 33.9 bits (74), Expect = 2.1
Identities = 27/102 (26%), Positives = 48/102 (47%), Gaps = 1/102 (0%)
Frame = +3
Query: 69 AVGLLKGHKTTXISAGRKGLTXKAIXIRPARLKGLQTKHSKFVRDLVREVVGHAQYEKRA 248
A+ LKG +A GLT + + + + +QT + +R + HA E +
Sbjct: 383 ALESLKGRSLVETAA--TGLTQQPVIMEYVTEQFIQTIEREMIRGELNLFKNHALIEAQT 440
Query: 249 MELLKVSKDKRALKFLKRRLGTHIRAKRKREE-LSNVLAQMR 371
+ ++ ++ + L L RL TH + + EE L +LAQ+R
Sbjct: 441 QDYVREAQIQFILHPLVERLFTHFDTQAQLEEQLCKILAQLR 482
>UniRef50_A1CYX3 Cluster: 60S ribosomal protein L24b; n=4;
Eurotiomycetidae|Rep: 60S ribosomal protein L24b -
Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / NRRL
181)(Aspergillus fischerianus (strain ATCC 1020 / DSM
3700 / NRRL 181))
Length = 188
Score = 33.9 bits (74), Expect = 2.1
Identities = 17/41 (41%), Positives = 26/41 (63%)
Frame = +3
Query: 243 RAMELLKVSKDKRALKFLKRRLGTHIRAKRKREELSNVLAQ 365
+AME ++ + +R F KRRLG + +RKREE V+A+
Sbjct: 94 KAMERVEEIRARRERAFTKRRLGGKLARERKREEDRRVVAE 134
>UniRef50_A2BM16 Cluster: Predicted Rad50; n=1; Hyperthermus
butylicus DSM 5456|Rep: Predicted Rad50 - Hyperthermus
butylicus (strain DSM 5456 / JCM 9403)
Length = 887
Score = 33.5 bits (73), Expect = 2.7
Identities = 23/68 (33%), Positives = 35/68 (51%), Gaps = 4/68 (5%)
Frame = +3
Query: 156 ARLKGLQTKHSKFVRDLVREVVGHAQYEKRAMELLKVSKDKRALKFLKRRL----GTHIR 323
ARL+ L+T+ +K + H +YE+ EL K+ + + LKRRL +
Sbjct: 532 ARLEELRTEQAKLSERRLELFEKHKEYEEARKELEKLGQAVVEYRVLKRRLEELEKRRVE 591
Query: 324 AKRKREEL 347
A+R REEL
Sbjct: 592 AERLREEL 599
>UniRef50_Q2FTZ5 Cluster: Putative uncharacterized protein; n=1;
Methanospirillum hungatei JF-1|Rep: Putative
uncharacterized protein - Methanospirillum hungatei
(strain JF-1 / DSM 864)
Length = 540
Score = 31.9 bits (69), Expect = 8.3
Identities = 18/57 (31%), Positives = 33/57 (57%)
Frame = +3
Query: 198 RDLVREVVGHAQYEKRAMELLKVSKDKRALKFLKRRLGTHIRAKRKREELSNVLAQM 368
R+L+ ++G + A+ LLK D + F + R+ H+ A K EE++N+LA++
Sbjct: 62 RELLLTLLGD---HEEAIHLLKEIDDLKKSPFSQFRIARHLGALGKHEEMNNLLARL 115
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 371,555,638
Number of Sequences: 1657284
Number of extensions: 6224773
Number of successful extensions: 16276
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 16000
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16265
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 29691847201
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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