Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P01_F_K06
         (500 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_06_1294 - 36076524-36076554,36076821-36076891,36077221-360772...    99   1e-21
05_05_0108 + 22451440-22451541,22452228-22452427,22452979-22453018    100   1e-21
09_01_0024 + 438288-438542,439020-439069,440096-440351                 29   2.8  
03_06_0682 - 35516081-35518303                                         29   2.8  
11_02_0038 - 7631462-7634428,7635975-7636250                           27   6.4  
08_01_0007 - 57681-57728,58260-58336,58418-58464,58808-58908,590...    27   6.4  
04_04_1144 + 31222556-31222633,31223238-31227665,31227724-312277...    27   6.4  

>01_06_1294 -
           36076524-36076554,36076821-36076891,36077221-36077275,
           36077363-36077562,36078614-36078715
          Length = 152

 Score =   99 bits (238), Expect = 1e-21
 Identities = 49/82 (59%), Positives = 60/82 (73%)
 Frame = +3

Query: 126 LTXKAIXIRPARLKGLQTKHSKFVRDLVREVVGHAQYEKRAMELLKVSKDKRALKFLKRR 305
           +T + +  RP+  KG  TK   FVR L+REVVG A YEKR  ELLKV KDKRALK  KR+
Sbjct: 20  VTKRELPPRPSDRKGKSTKRVNFVRGLIREVVGFAPYEKRITELLKVGKDKRALKVAKRK 79

Query: 306 LGTHIRAKRKREELSNVLAQMR 371
           LGTH RAK+KREE++ V+ +MR
Sbjct: 80  LGTHKRAKKKREEMAGVIRKMR 101


>05_05_0108 + 22451440-22451541,22452228-22452427,22452979-22453018
          Length = 113

 Score = 99.5 bits (237), Expect = 1e-21
 Identities = 49/82 (59%), Positives = 60/82 (73%)
 Frame = +3

Query: 126 LTXKAIXIRPARLKGLQTKHSKFVRDLVREVVGHAQYEKRAMELLKVSKDKRALKFLKRR 305
           +T + +  RP+  KG  TK   FVR+L+REV G A YEKR  ELLKV KDKRALK  KR+
Sbjct: 20  VTKRELPPRPSDRKGKSTKRVTFVRNLIREVAGFAPYEKRITELLKVGKDKRALKVAKRK 79

Query: 306 LGTHIRAKRKREELSNVLAQMR 371
           LGTH RAK+KREE++ VL +MR
Sbjct: 80  LGTHKRAKKKREEMAGVLRKMR 101


>09_01_0024 + 438288-438542,439020-439069,440096-440351
          Length = 186

 Score = 28.7 bits (61), Expect = 2.8
 Identities = 14/42 (33%), Positives = 26/42 (61%)
 Frame = +3

Query: 228 AQYEKRAMELLKVSKDKRALKFLKRRLGTHIRAKRKREELSN 353
           A++E R  E LK ++++ A K LKR+     + ++KR + +N
Sbjct: 122 AEFELRREERLKEAEERTAKKRLKRQKKKQRKKEKKRSKTNN 163


>03_06_0682 - 35516081-35518303
          Length = 740

 Score = 28.7 bits (61), Expect = 2.8
 Identities = 18/81 (22%), Positives = 37/81 (45%), Gaps = 4/81 (4%)
 Frame = +3

Query: 129 TXKAIXIRPARLKGLQTKHSKFVRDLVREVVGHAQYEKRAMELLK----VSKDKRALKFL 296
           T   I   P  +  L+  +  F+++++     +++ EKR  ELL+    ++K        
Sbjct: 316 TVAEIMAPPKEVHHLKDLNENFIKEIIERSAFNSEEEKRQSELLEMVGDIAKKCSGSPLA 375

Query: 297 KRRLGTHIRAKRKREELSNVL 359
              LG+ +R K  ++E   +L
Sbjct: 376 ATALGSTLRTKTTKKEWEAIL 396


>11_02_0038 - 7631462-7634428,7635975-7636250
          Length = 1080

 Score = 27.5 bits (58), Expect = 6.4
 Identities = 11/28 (39%), Positives = 17/28 (60%)
 Frame = +3

Query: 273 DKRALKFLKRRLGTHIRAKRKREELSNV 356
           DK+ LKFL  R  TH +     E+++N+
Sbjct: 791 DKKHLKFLNLRCTTHTKESYTMEDITNI 818


>08_01_0007 -
           57681-57728,58260-58336,58418-58464,58808-58908,
           59016-59108,59418-59540,59637-59755,60154-60510,
           60888-61011
          Length = 362

 Score = 27.5 bits (58), Expect = 6.4
 Identities = 11/30 (36%), Positives = 15/30 (50%)
 Frame = +2

Query: 2   GPADAFSSDSCQSXIMAPRFCNRSRPAQRP 91
           GPA ++  +S  S  MAP  C    P + P
Sbjct: 161 GPASSYGVESFTSPSMAPNICTHMPPIEGP 190


>04_04_1144 +
           31222556-31222633,31223238-31227665,31227724-31227789,
           31227790-31228014,31228097-31228255,31228393-31228551,
           31228855-31229013,31229371-31229490,31229604-31229825
          Length = 1871

 Score = 27.5 bits (58), Expect = 6.4
 Identities = 20/76 (26%), Positives = 40/76 (52%)
 Frame = +3

Query: 135 KAIXIRPARLKGLQTKHSKFVRDLVREVVGHAQYEKRAMELLKVSKDKRALKFLKRRLGT 314
           +A   + A L+ +    S+  ++LV E +G    EK+ +ELL +  +++  ++LK +   
Sbjct: 639 EAYQTKAASLEAVMESASEKEKELV-ESLGQITEEKKKLELLVLEYEEKTEEYLKEKQSL 697

Query: 315 HIRAKRKREELSNVLA 362
               +R + + S VLA
Sbjct: 698 E---ERLQSQESKVLA 710


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,219,711
Number of Sequences: 37544
Number of extensions: 177713
Number of successful extensions: 442
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 438
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 442
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1059318940
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)