Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P01_F_K05
         (634 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.               26   0.26 
AB022907-1|BAA86908.1|  615|Apis mellifera glucose oxidase protein.    23   1.9  
DQ435332-1|ABD92647.1|  135|Apis mellifera OBP15 protein.              21   9.9  
DQ026037-1|AAY87896.1|  431|Apis mellifera nicotinic acetylcholi...    21   9.9  
AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cycl...    21   9.9  

>DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.
          Length = 828

 Score = 26.2 bits (55), Expect = 0.26
 Identities = 10/27 (37%), Positives = 12/27 (44%)
 Frame = +2

Query: 437 KTSFLLGGWRGEFRNVTCKTQPWTTVY 517
           K    LGGW    R+     QPW  V+
Sbjct: 565 KLGSALGGWHPSDRSARLMLQPWANVF 591


>AB022907-1|BAA86908.1|  615|Apis mellifera glucose oxidase protein.
          Length = 615

 Score = 23.4 bits (48), Expect = 1.9
 Identities = 13/36 (36%), Positives = 18/36 (50%)
 Frame = +2

Query: 236 LNSDFGNPSPVYIKNNQFLIPNLTDRVSLRSGEFMV 343
           LNS + N SP+   +     P LTD  S  +GE  +
Sbjct: 4   LNSMYNNVSPLQCTSPFLGGPQLTDVCSASNGELFL 39


>DQ435332-1|ABD92647.1|  135|Apis mellifera OBP15 protein.
          Length = 135

 Score = 21.0 bits (42), Expect = 9.9
 Identities = 6/14 (42%), Positives = 13/14 (92%)
 Frame = -2

Query: 162 NLNEYLNKDISKIY 121
           N NE+++++I+KI+
Sbjct: 78  NFNEHVSREIAKIF 91


>DQ026037-1|AAY87896.1|  431|Apis mellifera nicotinic acetylcholine
           receptor alpha9subunit protein.
          Length = 431

 Score = 21.0 bits (42), Expect = 9.9
 Identities = 6/22 (27%), Positives = 15/22 (68%)
 Frame = +2

Query: 242 SDFGNPSPVYIKNNQFLIPNLT 307
           SDF   + +Y+K++   +P+++
Sbjct: 109 SDFDGINYIYVKSDDIWVPDIS 130


>AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cyclase
           beta-3 protein.
          Length = 832

 Score = 21.0 bits (42), Expect = 9.9
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = +3

Query: 357 EAATTSFSATKRETEDN 407
           E ATTS  A KRE  ++
Sbjct: 766 EKATTSLEAEKREKSEH 782


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 175,937
Number of Sequences: 438
Number of extensions: 3706
Number of successful extensions: 7
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 18949215
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)