Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P01_F_K04
(649 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF217810-1|AAF71998.1| 431|Tribolium castaneum fork head orthol... 23 2.2
U09586-3|AAC47272.1| 470|Tribolium castaneum integrase protein. 22 3.8
AY800247-1|AAV66724.1| 790|Tribolium castaneum pangolin protein. 22 5.0
AY800246-1|AAV66723.1| 682|Tribolium castaneum pangolin protein. 22 5.0
AF321227-6|AAK16426.1| 150|Tribolium castaneum Pb protein. 21 6.6
AF187068-1|AAF03888.1| 477|Tribolium castaneum proboscipedia or... 21 6.6
AY055847-1|AAL23667.2| 312|Tribolium castaneum cephalothorax pr... 21 8.7
AY055846-1|AAL26542.2| 312|Tribolium castaneum cephalothorax pr... 21 8.7
AY055845-1|AAL23670.2| 230|Tribolium castaneum cephalothorax pr... 21 8.7
AF426396-1|AAL27023.2| 312|Tribolium castaneum cephalothorax pr... 21 8.7
AF426395-1|AAL27022.2| 297|Tribolium castaneum cephalothorax pr... 21 8.7
AF416773-1|AAL09697.1| 268|Tribolium castaneum cephalothorax pr... 21 8.7
AF321227-2|AAK16422.1| 312|Tribolium castaneum Scr protein. 21 8.7
AF261823-1|AAG13010.1| 157|Tribolium castaneum cephalothorax pr... 21 8.7
AF227628-1|AAF42868.1| 312|Tribolium castaneum sex combs reduce... 21 8.7
>AF217810-1|AAF71998.1| 431|Tribolium castaneum fork head
orthologue protein.
Length = 431
Score = 23.0 bits (47), Expect = 2.2
Identities = 9/15 (60%), Positives = 10/15 (66%)
Frame = -3
Query: 569 KVIRRSFTDVKSPYS 525
K RRS+T K PYS
Sbjct: 130 KTYRRSYTHAKPPYS 144
>U09586-3|AAC47272.1| 470|Tribolium castaneum integrase protein.
Length = 470
Score = 22.2 bits (45), Expect = 3.8
Identities = 9/16 (56%), Positives = 12/16 (75%), Gaps = 1/16 (6%)
Frame = -2
Query: 639 QGPVTPQAYDEV-DLI 595
QGP+TP YD + DL+
Sbjct: 186 QGPLTPILYDHIGDLV 201
>AY800247-1|AAV66724.1| 790|Tribolium castaneum pangolin protein.
Length = 790
Score = 21.8 bits (44), Expect = 5.0
Identities = 13/46 (28%), Positives = 23/46 (50%), Gaps = 3/46 (6%)
Frame = -1
Query: 553 PSPT*SPHTPQGVCHPKL---PPRRTPPCFCHERASVLAERRVPVS 425
P P SPH P HP + P++ P H+ + L +++P++
Sbjct: 232 PHPGLSPHPPHLSSHPAIVTPGPKQELPDLNHKPLN-LTIKKMPIA 276
>AY800246-1|AAV66723.1| 682|Tribolium castaneum pangolin protein.
Length = 682
Score = 21.8 bits (44), Expect = 5.0
Identities = 13/46 (28%), Positives = 23/46 (50%), Gaps = 3/46 (6%)
Frame = -1
Query: 553 PSPT*SPHTPQGVCHPKL---PPRRTPPCFCHERASVLAERRVPVS 425
P P SPH P HP + P++ P H+ + L +++P++
Sbjct: 124 PHPGLSPHPPHLSSHPAIVTPGPKQELPDLNHKPLN-LTIKKMPIA 168
>AF321227-6|AAK16426.1| 150|Tribolium castaneum Pb protein.
Length = 150
Score = 21.4 bits (43), Expect = 6.6
Identities = 10/32 (31%), Positives = 13/32 (40%)
Frame = +2
Query: 326 PPWSCKSRIRRRRG*PGTSLPSPCWSSRKFTT 421
PP + G PG ++P W K TT
Sbjct: 93 PPAGYPMDVPHGMGSPGVNVPEYPWMKEKKTT 124
>AF187068-1|AAF03888.1| 477|Tribolium castaneum proboscipedia
ortholog protein.
Length = 477
Score = 21.4 bits (43), Expect = 6.6
Identities = 10/32 (31%), Positives = 13/32 (40%)
Frame = +2
Query: 326 PPWSCKSRIRRRRG*PGTSLPSPCWSSRKFTT 421
PP + G PG ++P W K TT
Sbjct: 93 PPAGYPMDVPHGMGSPGVNVPEYPWMKEKKTT 124
>AY055847-1|AAL23667.2| 312|Tribolium castaneum cephalothorax
protein.
Length = 312
Score = 21.0 bits (42), Expect = 8.7
Identities = 8/17 (47%), Positives = 10/17 (58%)
Frame = -1
Query: 529 TPQGVCHPKLPPRRTPP 479
+PQ + PPR TPP
Sbjct: 112 SPQDLSTNGAPPRSTPP 128
>AY055846-1|AAL26542.2| 312|Tribolium castaneum cephalothorax
protein.
Length = 312
Score = 21.0 bits (42), Expect = 8.7
Identities = 8/17 (47%), Positives = 10/17 (58%)
Frame = -1
Query: 529 TPQGVCHPKLPPRRTPP 479
+PQ + PPR TPP
Sbjct: 112 SPQDLSTNGAPPRSTPP 128
>AY055845-1|AAL23670.2| 230|Tribolium castaneum cephalothorax
protein.
Length = 230
Score = 21.0 bits (42), Expect = 8.7
Identities = 8/17 (47%), Positives = 10/17 (58%)
Frame = -1
Query: 529 TPQGVCHPKLPPRRTPP 479
+PQ + PPR TPP
Sbjct: 112 SPQDLSTNGAPPRSTPP 128
>AF426396-1|AAL27023.2| 312|Tribolium castaneum cephalothorax
protein.
Length = 312
Score = 21.0 bits (42), Expect = 8.7
Identities = 8/17 (47%), Positives = 10/17 (58%)
Frame = -1
Query: 529 TPQGVCHPKLPPRRTPP 479
+PQ + PPR TPP
Sbjct: 112 SPQDLSTNGAPPRSTPP 128
>AF426395-1|AAL27022.2| 297|Tribolium castaneum cephalothorax
protein.
Length = 297
Score = 21.0 bits (42), Expect = 8.7
Identities = 8/17 (47%), Positives = 10/17 (58%)
Frame = -1
Query: 529 TPQGVCHPKLPPRRTPP 479
+PQ + PPR TPP
Sbjct: 112 SPQDLSTNGAPPRSTPP 128
>AF416773-1|AAL09697.1| 268|Tribolium castaneum cephalothorax
protein.
Length = 268
Score = 21.0 bits (42), Expect = 8.7
Identities = 8/17 (47%), Positives = 10/17 (58%)
Frame = -1
Query: 529 TPQGVCHPKLPPRRTPP 479
+PQ + PPR TPP
Sbjct: 68 SPQDLSTNGAPPRSTPP 84
>AF321227-2|AAK16422.1| 312|Tribolium castaneum Scr protein.
Length = 312
Score = 21.0 bits (42), Expect = 8.7
Identities = 8/17 (47%), Positives = 10/17 (58%)
Frame = -1
Query: 529 TPQGVCHPKLPPRRTPP 479
+PQ + PPR TPP
Sbjct: 112 SPQDLSTNGAPPRSTPP 128
>AF261823-1|AAG13010.1| 157|Tribolium castaneum cephalothorax
protein.
Length = 157
Score = 21.0 bits (42), Expect = 8.7
Identities = 8/17 (47%), Positives = 10/17 (58%)
Frame = -1
Query: 529 TPQGVCHPKLPPRRTPP 479
+PQ + PPR TPP
Sbjct: 112 SPQDLSTNGAPPRSTPP 128
>AF227628-1|AAF42868.1| 312|Tribolium castaneum sex combs reduced
Scr protein.
Length = 312
Score = 21.0 bits (42), Expect = 8.7
Identities = 8/17 (47%), Positives = 10/17 (58%)
Frame = -1
Query: 529 TPQGVCHPKLPPRRTPP 479
+PQ + PPR TPP
Sbjct: 112 SPQDLSTNGAPPRSTPP 128
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 159,023
Number of Sequences: 336
Number of extensions: 3611
Number of successful extensions: 16
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16656800
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -