Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P01_F_K04
(649 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC323.01c |||mitochondrial NADH kinase |Schizosaccharomyces po... 46 6e-06
SPAC9G1.11c |spn4||septin Spn4|Schizosaccharomyces pombe|chr 1||... 34 0.020
SPAC3H5.11 |||NAD/NADH kinase |Schizosaccharomyces pombe|chr 1||... 34 0.020
SPBC26H8.12 |||cytochrome c heme lyase|Schizosaccharomyces pombe... 27 3.1
SPBC16H5.02 |pfk1||6-phosphofructokinase |Schizosaccharomyces po... 26 5.4
SPAC824.07 |||hydroxyacylglutathione hydrolase |Schizosaccharomy... 26 5.4
SPAC323.02c |||20S proteasome component alpha 5|Schizosaccharomy... 26 5.4
SPAC8C9.09c |mug129||sequence orphan|Schizosaccharomyces pombe|c... 26 5.4
SPBC25B2.06c |btb2||BTB/POZ domain protein Btb2|Schizosaccharomy... 25 7.1
>SPAC323.01c |||mitochondrial NADH kinase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 361
Score = 45.6 bits (103), Expect = 6e-06
Identities = 30/96 (31%), Positives = 50/96 (52%)
Frame = +1
Query: 361 QRLTWYKPPLTVLVIKKVHDAQILAPFVQLVHWLVHDKSMVVFVEAAVLDDTLLAEYGDF 540
++L W KPP +L++KK D ++ F LV L + + ++ +T +A+ +
Sbjct: 55 KQLQWPKPPKNILILKKRMDERVDHCFETLVQHLQQ-----TYPDICIITETDVAKKFSY 109
Query: 541 TSVKERLMTFRASTDDLTDKIDFIICLGGDGTLXHA 648
+ L T+ DL K+D II +GGDGT+ HA
Sbjct: 110 LN----LYTW-TEISDLEQKVDAIITVGGDGTILHA 140
>SPAC9G1.11c |spn4||septin Spn4|Schizosaccharomyces pombe|chr
1|||Manual
Length = 380
Score = 33.9 bits (74), Expect = 0.020
Identities = 16/42 (38%), Positives = 24/42 (57%)
Frame = -2
Query: 444 NEGCQYLGVVNFLDDQHGEGRLVPGQPLRRRILDLHDHGGIF 319
N GC + VV F++DQH QP RR+I+D+ H ++
Sbjct: 103 NSGC-WESVVEFIEDQHESYMRQDQQPDRRKIIDMRIHACLY 143
>SPAC3H5.11 |||NAD/NADH kinase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 393
Score = 33.9 bits (74), Expect = 0.020
Identities = 24/94 (25%), Positives = 47/94 (50%), Gaps = 1/94 (1%)
Frame = +1
Query: 367 LTWYKPPLT-VLVIKKVHDAQILAPFVQLVHWLVHDKSMVVFVEAAVLDDTLLAEYGDFT 543
+T KP +T +L++ K D ++ + V+WL+ ++ VF++ ++ D L E +
Sbjct: 70 VTPIKPNITSILLVSKPGDEEVEEKLKEFVYWLISLDNITVFIQKSMED---LFEKTEKI 126
Query: 544 SVKERLMTFRASTDDLTDKIDFIICLGGDGTLXH 645
L+ + S D ++ LGGDGT+ +
Sbjct: 127 QYWTTLLCTKHS-----QLFDLVLTLGGDGTVLY 155
>SPBC26H8.12 |||cytochrome c heme lyase|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 377
Score = 26.6 bits (56), Expect = 3.1
Identities = 11/31 (35%), Positives = 16/31 (51%)
Frame = -2
Query: 321 FHNPAAWSKLLYWGRRVQGSSSPKCLKLVYN 229
F N AWS++ W R ++ PK L+ N
Sbjct: 254 FLNEGAWSEIKAWEREAGENTEPKLLRFEGN 284
>SPBC16H5.02 |pfk1||6-phosphofructokinase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 942
Score = 25.8 bits (54), Expect = 5.4
Identities = 14/33 (42%), Positives = 20/33 (60%)
Frame = +1
Query: 550 KERLMTFRASTDDLTDKIDFIICLGGDGTLXHA 648
+ER RA+ + ++ ID II GGDG+L A
Sbjct: 272 RERPGRLRAAKNLISAGIDSIIVCGGDGSLTGA 304
>SPAC824.07 |||hydroxyacylglutathione hydrolase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 256
Score = 25.8 bits (54), Expect = 5.4
Identities = 16/52 (30%), Positives = 25/52 (48%)
Frame = +1
Query: 490 VEAAVLDDTLLAEYGDFTSVKERLMTFRASTDDLTDKIDFIICLGGDGTLXH 645
V AA+ DDT+ ++T + + ST +LT +DF C + T H
Sbjct: 164 VLAALPDDTVTYPGHEYTKSNAKFSSTIFSTPELTKLVDF--CKNHESTTGH 213
>SPAC323.02c |||20S proteasome component alpha 5|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 247
Score = 25.8 bits (54), Expect = 5.4
Identities = 22/101 (21%), Positives = 47/101 (46%), Gaps = 5/101 (4%)
Frame = -2
Query: 513 VIQNCRLDEHHHAFVMNEPVY*LNEGCQYLG--VVNFLDDQHGEGRLVPGQPLRRRIL-- 346
+I++ R+ +H F +EP + Q + + F + + GE R++ +P +L
Sbjct: 88 IIEHARVQTQNHRFTYDEP-QGIESTTQSICDLALRFGEGEDGEERIM-SRPFGVALLIA 145
Query: 345 DLHDHG-GIFHNPAAWSKLLYWGRRVQGSSSPKCLKLVYNF 226
+ +HG ++H+ + + Y + + S P +LV F
Sbjct: 146 GIDEHGPQLYHSEPSGTYFRYEAKAIGSGSEPAKSELVKEF 186
>SPAC8C9.09c |mug129||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 302
Score = 25.8 bits (54), Expect = 5.4
Identities = 27/94 (28%), Positives = 41/94 (43%), Gaps = 4/94 (4%)
Frame = -2
Query: 648 SMXQGPVTPQAYDEVDLISEIVGASSESHQTFLHRRKVPILRKECVIQNCR--LDEHHHA 475
S Q PV A ++ SEI SS S L K L +E ++C + +
Sbjct: 199 SPNQQPVDSVANPQLRKASEITTISSRSDVDIL-LGKFKALIQESPDEHCNSWIQRIYIT 257
Query: 474 FVM--NEPVY*LNEGCQYLGVVNFLDDQHGEGRL 379
V+ N +Y LNE +L + + +Q EG+L
Sbjct: 258 CVLPRNHYIYLLNEQVDFLTSIEIMKNQVTEGKL 291
>SPBC25B2.06c |btb2||BTB/POZ domain protein Btb2|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 284
Score = 25.4 bits (53), Expect = 7.1
Identities = 16/55 (29%), Positives = 25/55 (45%)
Frame = -2
Query: 588 IVGASSESHQTFLHRRKVPILRKECVIQNCRLDEHHHAFVMNEPVY*LNEGCQYL 424
I G + H FL R P+L ++ + N + D H+ V E Y E C ++
Sbjct: 43 IKGETYHLHALFLGRS--PVLLQKLIENNPKGDVHYTIEVETEDPYVTKESCLFV 95
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,741,126
Number of Sequences: 5004
Number of extensions: 57621
Number of successful extensions: 141
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 138
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 139
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 291768710
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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