BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P01_F_K03
(789 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT023697-1|AAY85097.1| 90|Drosophila melanogaster IP03424p pro... 172 4e-43
AE014297-859|AAF54327.1| 85|Drosophila melanogaster CG11985-PA... 170 2e-42
BT024333-1|ABC86395.1| 157|Drosophila melanogaster IP10176p pro... 30 3.1
AE014296-2106|AAF49950.3| 295|Drosophila melanogaster CG9760-PB... 30 3.1
>BT023697-1|AAY85097.1| 90|Drosophila melanogaster IP03424p
protein.
Length = 90
Score = 172 bits (419), Expect = 4e-43
Identities = 76/87 (87%), Positives = 81/87 (93%)
Frame = +3
Query: 135 NKMGERYNIHSQLEHLQSKYIGTGHADTTKYEWLMNQHRDSCCSYMGHPDLLSYFAIVEN 314
+KMGERYNIHSQLEHLQSKYIGTGHADTTK+EWL NQHRDS SYMGH D+L+YFAI EN
Sbjct: 4 SKMGERYNIHSQLEHLQSKYIGTGHADTTKFEWLTNQHRDSLASYMGHYDILNYFAIAEN 63
Query: 315 ESKARVKFNLMERMLQPCGPPPEKPED 395
ESKARV+FNLMERMLQPCGPPPEK ED
Sbjct: 64 ESKARVRFNLMERMLQPCGPPPEKLED 90
>AE014297-859|AAF54327.1| 85|Drosophila melanogaster CG11985-PA
protein.
Length = 85
Score = 170 bits (413), Expect = 2e-42
Identities = 75/85 (88%), Positives = 79/85 (92%)
Frame = +3
Query: 141 MGERYNIHSQLEHLQSKYIGTGHADTTKYEWLMNQHRDSCCSYMGHPDLLSYFAIVENES 320
MGERYNIHSQLEHLQSKYIGTGHADTTK+EWL NQHRDS SYMGH D+L+YFAI ENES
Sbjct: 1 MGERYNIHSQLEHLQSKYIGTGHADTTKFEWLTNQHRDSLASYMGHYDILNYFAIAENES 60
Query: 321 KARVKFNLMERMLQPCGPPPEKPED 395
KARV+FNLMERMLQPCGPPPEK ED
Sbjct: 61 KARVRFNLMERMLQPCGPPPEKLED 85
>BT024333-1|ABC86395.1| 157|Drosophila melanogaster IP10176p
protein.
Length = 157
Score = 30.3 bits (65), Expect = 3.1
Identities = 24/93 (25%), Positives = 48/93 (51%), Gaps = 2/93 (2%)
Frame = -2
Query: 425 LILFLQSKRLIFRLFWRWAAWLKHSFHQIEFYARF--RFIFYDRKVTQQIRMTHVAAARV 252
L+LFL S IF ++ W A++ +++ ++Y ++ + F ++ + + H+A
Sbjct: 2 LLLFLLS---IFSHYYAWWAYI--NYYNDDYYNQWNHQLFFTVTELFSTVLVMHLANTTN 56
Query: 251 AMLVHKPFIFCSVGVACAYIFAL*MFKLTVNVV 153
+ K +FC VG+A +I A + +NVV
Sbjct: 57 VVTPKK--VFCIVGIALLHILASSFDQFFMNVV 87
>AE014296-2106|AAF49950.3| 295|Drosophila melanogaster CG9760-PB
protein.
Length = 295
Score = 30.3 bits (65), Expect = 3.1
Identities = 24/93 (25%), Positives = 48/93 (51%), Gaps = 2/93 (2%)
Frame = -2
Query: 425 LILFLQSKRLIFRLFWRWAAWLKHSFHQIEFYARF--RFIFYDRKVTQQIRMTHVAAARV 252
L+LFL S IF ++ W A++ +++ ++Y ++ + F ++ + + H+A
Sbjct: 109 LLLFLLS---IFSHYYAWWAYI--NYYNDDYYNQWNHQLFFTVTELFSTVLVMHLANTTN 163
Query: 251 AMLVHKPFIFCSVGVACAYIFAL*MFKLTVNVV 153
+ K +FC VG+A +I A + +NVV
Sbjct: 164 VVTPKK--VFCIVGIALLHILASSFDQFFMNVV 194
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,079,854
Number of Sequences: 53049
Number of extensions: 547855
Number of successful extensions: 1091
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1081
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1091
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3654740856
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -