Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P01_F_K03
         (789 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase prot...    25   0.80 
AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase...    24   1.9  
DQ257415-1|ABB81846.1|  430|Apis mellifera yellow-like protein p...    23   2.4  
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    23   4.3  
DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like recept...    22   5.7  
DQ201783-1|ABB05503.1|  381|Apis mellifera capa receptor-like GP...    22   5.7  
AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine rece...    21   9.9  

>AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase
           protein.
          Length = 693

 Score = 25.0 bits (52), Expect = 0.80
 Identities = 10/27 (37%), Positives = 17/27 (62%)
 Frame = +3

Query: 510 NTISQYSIIQIVPPKTQLLSIKTTNNR 590
           NT+ QY++ Q+  P  ++  IK T N+
Sbjct: 417 NTLPQYTVQQLDFPGIEIADIKLTTNQ 443


>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
           protein.
          Length = 1143

 Score = 23.8 bits (49), Expect = 1.9
 Identities = 9/23 (39%), Positives = 14/23 (60%)
 Frame = +3

Query: 279 PDLLSYFAIVENESKARVKFNLM 347
           P+LL YFA +    K + + NL+
Sbjct: 830 PNLLRYFASIATNPKEQAQLNLL 852


>DQ257415-1|ABB81846.1|  430|Apis mellifera yellow-like protein
           protein.
          Length = 430

 Score = 23.4 bits (48), Expect = 2.4
 Identities = 7/14 (50%), Positives = 12/14 (85%)
 Frame = -3

Query: 259 QESRCWFISHSYFV 218
           +++R W I+HSYF+
Sbjct: 223 EQNRSWRITHSYFM 236


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
           AbsCAM-Ig7A protein.
          Length = 1919

 Score = 22.6 bits (46), Expect = 4.3
 Identities = 8/21 (38%), Positives = 13/21 (61%)
 Frame = +1

Query: 91  TLVVYTISTSILPLKIKWVKD 153
           T +  +++   LPL I W+KD
Sbjct: 628 TTLTCSVTRGDLPLSISWLKD 648


>DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like receptor
           2 protein.
          Length = 581

 Score = 22.2 bits (45), Expect = 5.7
 Identities = 8/22 (36%), Positives = 13/22 (59%)
 Frame = +2

Query: 2   IVYXILFVLGCYAMKSYCYVIS 67
           ++Y ++FV G     S C VI+
Sbjct: 58  VIYAVIFVTGLVGNVSTCVVIA 79


>DQ201783-1|ABB05503.1|  381|Apis mellifera capa receptor-like GPCR
           protein.
          Length = 381

 Score = 22.2 bits (45), Expect = 5.7
 Identities = 9/21 (42%), Positives = 13/21 (61%)
 Frame = +2

Query: 2   IVYXILFVLGCYAMKSYCYVI 64
           I+Y I+FV G +   + C VI
Sbjct: 45  IIYMIIFVTGIFGNITTCTVI 65


>AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine
           receptor protein.
          Length = 694

 Score = 21.4 bits (43), Expect = 9.9
 Identities = 6/14 (42%), Positives = 11/14 (78%)
 Frame = +3

Query: 621 VKCLTILFLYTNLF 662
           + C+ ++FLY N+F
Sbjct: 354 IPCIIMVFLYYNIF 367


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 192,686
Number of Sequences: 438
Number of extensions: 3900
Number of successful extensions: 18
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 24882285
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)