Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P01_F_K01
         (523 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF222292-1|ABN79652.1|  354|Tribolium castaneum cardioactive pep...    22   2.9  
AM292350-1|CAL23162.2|  429|Tribolium castaneum gustatory recept...    21   6.6  
AM292328-1|CAL23140.2|  429|Tribolium castaneum gustatory recept...    21   6.6  

>EF222292-1|ABN79652.1|  354|Tribolium castaneum cardioactive
           peptide receptor 2 protein.
          Length = 354

 Score = 22.2 bits (45), Expect = 2.9
 Identities = 9/38 (23%), Positives = 21/38 (55%)
 Frame = +1

Query: 13  SAVCRVLLVLFSIVFRSKIAIKMSLEIESMIRYTSPIN 126
           + +C+++  L ++V  S   + ++L I+     T P+N
Sbjct: 116 NVLCKIIRFLQAVVTYSSTYVLVALSIDRYDAITHPMN 153


>AM292350-1|CAL23162.2|  429|Tribolium castaneum gustatory receptor
           candidate 29 protein.
          Length = 429

 Score = 21.0 bits (42), Expect = 6.6
 Identities = 8/21 (38%), Positives = 11/21 (52%)
 Frame = +2

Query: 245 YFYHWWPPYFLVSVFCSCCYG 307
           YFY W   + +V   C C +G
Sbjct: 321 YFY-WSFGFLIVRTVCLCLFG 340


>AM292328-1|CAL23140.2|  429|Tribolium castaneum gustatory receptor
           candidate 7 protein.
          Length = 429

 Score = 21.0 bits (42), Expect = 6.6
 Identities = 8/21 (38%), Positives = 11/21 (52%)
 Frame = +2

Query: 245 YFYHWWPPYFLVSVFCSCCYG 307
           YFY W   + +V   C C +G
Sbjct: 321 YFY-WSFGFLIVRTVCLCLFG 340


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 103,903
Number of Sequences: 336
Number of extensions: 2361
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12573240
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)