Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P01_F_J24
(513 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical pr... 281 2e-76
Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical pr... 272 1e-73
X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin pr... 266 6e-72
U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory ... 266 6e-72
Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical p... 264 2e-71
Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical pr... 263 4e-71
Z78200-11|CAB01587.2| 426|Caenorhabditis elegans Hypothetical p... 186 8e-48
Z78198-13|CAB01575.2| 426|Caenorhabditis elegans Hypothetical p... 186 8e-48
Z81070-8|CAB03001.1| 449|Caenorhabditis elegans Hypothetical pr... 137 5e-33
D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin... 137 5e-33
Z99709-10|CAB16856.1| 448|Caenorhabditis elegans Hypothetical p... 135 2e-32
D14965-1|BAA03610.1| 448|Caenorhabditis elegans alpha-2 tubulin... 135 2e-32
Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical pr... 134 3e-32
Z37140-7|CAA85497.2| 452|Caenorhabditis elegans Hypothetical pr... 134 4e-32
Z37092-12|CAA85463.1| 448|Caenorhabditis elegans Hypothetical p... 130 4e-31
AL023832-2|CAA19476.1| 448|Caenorhabditis elegans Hypothetical ... 130 4e-31
U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha ... 130 6e-31
Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical pr... 128 2e-30
U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin M... 128 2e-30
AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensor... 128 2e-30
AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin... 128 2e-30
D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin... 126 9e-30
Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical pr... 122 2e-28
Z22179-11|CAA80164.1| 444|Caenorhabditis elegans Hypothetical p... 106 8e-24
AF287259-1|AAG24513.1| 444|Caenorhabditis elegans gamma-tubulin... 106 8e-24
AB017191-1|BAA32601.1| 435|Caenorhabditis elegans alpha tubulin... 106 1e-23
AF101312-1|AAC69221.3| 813|Caenorhabditis elegans Hypothetical ... 29 2.6
Z68750-3|CAA92964.2| 1092|Caenorhabditis elegans Hypothetical pr... 28 4.5
AF038608-17|AAC25822.2| 425|Caenorhabditis elegans Hypothetical... 28 4.5
Z73973-1|CAA98266.1| 357|Caenorhabditis elegans Hypothetical pr... 27 7.9
>Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical
protein B0272.1 protein.
Length = 444
Score = 281 bits (690), Expect = 2e-76
Identities = 126/132 (95%), Positives = 131/132 (99%)
Frame = +3
Query: 45 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 224
MREIVHIQAGQCGNQIGAKFWE+ISDEHGIDPTGAY+GDSDLQLERINVYYNEASGGKYV
Sbjct: 1 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGAYNGDSDLQLERINVYYNEASGGKYV 60
Query: 225 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 404
PRA LVDLEPGTMDSVR+GPFGQ+FRPDNFVFGQSGAGNNWAKGHYTEGAELVD+VLDVV
Sbjct: 61 PRACLVDLEPGTMDSVRAGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDNVLDVV 120
Query: 405 RKEAESCDCLQG 440
RKEAESCDCLQG
Sbjct: 121 RKEAESCDCLQG 132
>Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical
protein C54C6.2 protein.
Length = 444
Score = 272 bits (667), Expect = 1e-73
Identities = 120/132 (90%), Positives = 127/132 (96%)
Frame = +3
Query: 45 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 224
MREIVH+QAGQCGNQIGAKFWE+ISDEHGI P G Y G+SDLQLERINVYYNEA+GGKYV
Sbjct: 1 MREIVHVQAGQCGNQIGAKFWEVISDEHGIQPDGTYKGESDLQLERINVYYNEANGGKYV 60
Query: 225 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 404
PRA+LVDLEPGTMDSVRSGPFGQ+FRPDNFVFGQSGAGNNWAKGHYTEGAELVD+VLDVV
Sbjct: 61 PRAVLVDLEPGTMDSVRSGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDNVLDVV 120
Query: 405 RKEAESCDCLQG 440
RKEAE CDCLQG
Sbjct: 121 RKEAEGCDCLQG 132
>X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin
protein.
Length = 441
Score = 266 bits (652), Expect = 6e-72
Identities = 119/132 (90%), Positives = 126/132 (95%)
Frame = +3
Query: 45 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 224
MREIVHIQAGQCGNQIG+KFWE+ISDEHGIDP+G Y GDSDLQLERINVYYNEA KYV
Sbjct: 1 MREIVHIQAGQCGNQIGSKFWEVISDEHGIDPSGQYVGDSDLQLERINVYYNEAGSNKYV 60
Query: 225 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 404
PRA+LVDLEPGTMDSVRSGPFGQ+FRPDN+VFGQSGAGNNWAKGHYTEGAELVD+VLDVV
Sbjct: 61 PRAVLVDLEPGTMDSVRSGPFGQLFRPDNYVFGQSGAGNNWAKGHYTEGAELVDNVLDVV 120
Query: 405 RKEAESCDCLQG 440
RKEAES DCLQG
Sbjct: 121 RKEAESTDCLQG 132
>U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory
abnormality protein7 protein.
Length = 441
Score = 266 bits (652), Expect = 6e-72
Identities = 119/132 (90%), Positives = 126/132 (95%)
Frame = +3
Query: 45 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 224
MREIVHIQAGQCGNQIG+KFWE+ISDEHGIDP+G Y GDSDLQLERINVYYNEA KYV
Sbjct: 1 MREIVHIQAGQCGNQIGSKFWEVISDEHGIDPSGQYVGDSDLQLERINVYYNEAGSNKYV 60
Query: 225 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 404
PRA+LVDLEPGTMDSVRSGPFGQ+FRPDN+VFGQSGAGNNWAKGHYTEGAELVD+VLDVV
Sbjct: 61 PRAVLVDLEPGTMDSVRSGPFGQLFRPDNYVFGQSGAGNNWAKGHYTEGAELVDNVLDVV 120
Query: 405 RKEAESCDCLQG 440
RKEAES DCLQG
Sbjct: 121 RKEAESTDCLQG 132
>Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical
protein K01G5.7 protein.
Length = 449
Score = 264 bits (648), Expect = 2e-71
Identities = 115/132 (87%), Positives = 126/132 (95%)
Frame = +3
Query: 45 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 224
MREIVH+QAGQCGNQIG+KFWE+ISDEHGI P G + G+SDLQLERI+VYYNEA+ GKYV
Sbjct: 1 MREIVHVQAGQCGNQIGSKFWEVISDEHGIQPDGTFKGESDLQLERIDVYYNEANNGKYV 60
Query: 225 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 404
PRA+LVDLEPGTMDSVRSGPFGQ+FRPDNFVFGQSGAGNNWAKGHYTEGAELVD+VLDV+
Sbjct: 61 PRAVLVDLEPGTMDSVRSGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDNVLDVI 120
Query: 405 RKEAESCDCLQG 440
RKEAE CDCLQG
Sbjct: 121 RKEAEGCDCLQG 132
>Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical
protein C36E8.5 protein.
Length = 450
Score = 263 bits (645), Expect = 4e-71
Identities = 114/132 (86%), Positives = 126/132 (95%)
Frame = +3
Query: 45 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 224
MREIVH+QAGQCGNQIG+KFWE+ISDEHGI P G + G++DLQLERI+VYYNEA+ GKYV
Sbjct: 1 MREIVHVQAGQCGNQIGSKFWEVISDEHGIQPDGTFKGETDLQLERIDVYYNEANNGKYV 60
Query: 225 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 404
PRA+LVDLEPGTMDSVRSGPFGQ+FRPDNFVFGQSGAGNNWAKGHYTEGAELVD+VLDV+
Sbjct: 61 PRAVLVDLEPGTMDSVRSGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDNVLDVI 120
Query: 405 RKEAESCDCLQG 440
RKEAE CDCLQG
Sbjct: 121 RKEAEGCDCLQG 132
>Z78200-11|CAB01587.2| 426|Caenorhabditis elegans Hypothetical
protein T04H1.9 protein.
Length = 426
Score = 186 bits (453), Expect = 8e-48
Identities = 80/132 (60%), Positives = 105/132 (79%)
Frame = +3
Query: 45 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 224
M+EI+++Q GQCGNQIGAKFWE IS+EHG+ G Y GD+ QLERI YY E G KYV
Sbjct: 1 MKEIINVQVGQCGNQIGAKFWEYISEEHGLQTDGTYKGDNGSQLERITSYYKEMEGRKYV 60
Query: 225 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 404
PRAILVDL+P +++ VRS +G++F P+N V G+SGAGNNW++G+Y +GAE+VD VL V+
Sbjct: 61 PRAILVDLDPESINYVRSTQYGKLFDPENAVSGESGAGNNWSRGYYEQGAEIVDKVLSVI 120
Query: 405 RKEAESCDCLQG 440
R+EAE+ D L+G
Sbjct: 121 RREAEAADSLEG 132
>Z78198-13|CAB01575.2| 426|Caenorhabditis elegans Hypothetical
protein T04H1.9 protein.
Length = 426
Score = 186 bits (453), Expect = 8e-48
Identities = 80/132 (60%), Positives = 105/132 (79%)
Frame = +3
Query: 45 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 224
M+EI+++Q GQCGNQIGAKFWE IS+EHG+ G Y GD+ QLERI YY E G KYV
Sbjct: 1 MKEIINVQVGQCGNQIGAKFWEYISEEHGLQTDGTYKGDNGSQLERITSYYKEMEGRKYV 60
Query: 225 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 404
PRAILVDL+P +++ VRS +G++F P+N V G+SGAGNNW++G+Y +GAE+VD VL V+
Sbjct: 61 PRAILVDLDPESINYVRSTQYGKLFDPENAVSGESGAGNNWSRGYYEQGAEIVDKVLSVI 120
Query: 405 RKEAESCDCLQG 440
R+EAE+ D L+G
Sbjct: 121 RREAEAADSLEG 132
>Z81070-8|CAB03001.1| 449|Caenorhabditis elegans Hypothetical
protein F26E4.8 protein.
Length = 449
Score = 137 bits (331), Expect = 5e-33
Identities = 58/132 (43%), Positives = 84/132 (63%)
Frame = +3
Query: 45 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 224
MRE++ I GQ G QIG WE+ EHGI P G D E ++++ G+YV
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSDQQADGESFTTFFSDTGNGRYV 60
Query: 225 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 404
PR+I VDLEP +D +R+G + ++F P+ + G+ A NN+A+GHYT G EL+D+VLD +
Sbjct: 61 PRSIFVDLEPTVVDEIRTGTYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTVLDRI 120
Query: 405 RKEAESCDCLQG 440
R+ A++C LQG
Sbjct: 121 RRLADNCSGLQG 132
>D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin
protein.
Length = 449
Score = 137 bits (331), Expect = 5e-33
Identities = 58/132 (43%), Positives = 84/132 (63%)
Frame = +3
Query: 45 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 224
MRE++ I GQ G QIG WE+ EHGI P G D E ++++ G+YV
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSDQQADGESFTTFFSDTGNGRYV 60
Query: 225 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 404
PR+I VDLEP +D +R+G + ++F P+ + G+ A NN+A+GHYT G EL+D+VLD +
Sbjct: 61 PRSIFVDLEPTVVDEIRTGTYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTVLDRI 120
Query: 405 RKEAESCDCLQG 440
R+ A++C LQG
Sbjct: 121 RRLADNCSGLQG 132
>Z99709-10|CAB16856.1| 448|Caenorhabditis elegans Hypothetical
protein C47B2.3 protein.
Length = 448
Score = 135 bits (326), Expect = 2e-32
Identities = 58/132 (43%), Positives = 85/132 (64%)
Frame = +3
Query: 45 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 224
MRE++ I GQ G QIG WE+ EHGI P G S + E ++++ G+YV
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPTQSTNEGESFTTFFSDTGSGRYV 60
Query: 225 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 404
PR+I VDLEP +D +R+G + ++F P+ + G+ A NN+A+GHYT G EL+D+VLD +
Sbjct: 61 PRSIFVDLEPTVVDEIRTGTYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTVLDRI 120
Query: 405 RKEAESCDCLQG 440
R+ A++C LQG
Sbjct: 121 RRLADNCSGLQG 132
>D14965-1|BAA03610.1| 448|Caenorhabditis elegans alpha-2 tubulin
protein.
Length = 448
Score = 135 bits (326), Expect = 2e-32
Identities = 58/132 (43%), Positives = 85/132 (64%)
Frame = +3
Query: 45 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 224
MRE++ I GQ G QIG WE+ EHGI P G S + E ++++ G+YV
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPTQSTNEGESFTTFFSDTGSGRYV 60
Query: 225 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 404
PR+I VDLEP +D +R+G + ++F P+ + G+ A NN+A+GHYT G EL+D+VLD +
Sbjct: 61 PRSIFVDLEPTVVDEIRTGTYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTVLDRI 120
Query: 405 RKEAESCDCLQG 440
R+ A++C LQG
Sbjct: 121 RRLADNCSGLQG 132
>Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical
protein F16D3.1 protein.
Length = 447
Score = 134 bits (325), Expect = 3e-32
Identities = 64/134 (47%), Positives = 84/134 (62%), Gaps = 2/134 (1%)
Frame = +3
Query: 45 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLE--RINVYYNEASGGK 218
MREIV I GQ G QIG WE+ EHGI P G D+ +E N +++E GK
Sbjct: 1 MREIVSIHIGQAGVQIGNACWELYCLEHGITPDGLMPDDTSYGVEDQSYNTFFSETPSGK 60
Query: 219 YVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLD 398
+VPRAI VDLEP +D VR+G + ++F P+ + G+ A NN+A+GHYT G EL+D V+D
Sbjct: 61 HVPRAIFVDLEPTVIDEVRTGTYAKLFHPEQLISGKEDAANNYARGHYTIGKELIDVVMD 120
Query: 399 VVRKEAESCDCLQG 440
VR+ E C LQG
Sbjct: 121 RVRRLTERCQSLQG 134
>Z37140-7|CAA85497.2| 452|Caenorhabditis elegans Hypothetical
protein ZK899.4 protein.
Length = 452
Score = 134 bits (324), Expect = 4e-32
Identities = 60/132 (45%), Positives = 86/132 (65%), Gaps = 1/132 (0%)
Frame = +3
Query: 48 REIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAY-HGDSDLQLERINVYYNEASGGKYV 224
RE V I GQ G QIG WE+ EHG+D G + + + + + +++E+ GK+V
Sbjct: 6 RECVSIHIGQAGAQIGNACWELYCIEHGLDEAGFLKEEEKNKKQQSLQAFFSESMNGKHV 65
Query: 225 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 404
PRAI VDLEP +D +R+G +G +F PD + G+ A NN+A+GHYT G EL+D VLD +
Sbjct: 66 PRAIYVDLEPTVLDEIRNGVYGNLFHPDQIINGKEDAANNYARGHYTIGKELIDVVLDRI 125
Query: 405 RKEAESCDCLQG 440
RK+ E+C+ LQG
Sbjct: 126 RKQTENCEGLQG 137
>Z37092-12|CAA85463.1| 448|Caenorhabditis elegans Hypothetical
protein F44F4.11 protein.
Length = 448
Score = 130 bits (315), Expect = 4e-31
Identities = 55/132 (41%), Positives = 83/132 (62%)
Frame = +3
Query: 45 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 224
MRE++ I GQ G QIG WE+ EHGI P G + + ++++ G+YV
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSEQQNEGGSFTTFFSDTGNGRYV 60
Query: 225 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 404
PR+I VDLEP +D +R+G + ++F P+ + G+ A NN+A+GHYT G EL+D+ LD +
Sbjct: 61 PRSIFVDLEPTVVDEIRTGNYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTTLDRI 120
Query: 405 RKEAESCDCLQG 440
R+ A++C LQG
Sbjct: 121 RRLADNCSGLQG 132
>AL023832-2|CAA19476.1| 448|Caenorhabditis elegans Hypothetical
protein F44F4.11 protein.
Length = 448
Score = 130 bits (315), Expect = 4e-31
Identities = 55/132 (41%), Positives = 83/132 (62%)
Frame = +3
Query: 45 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 224
MRE++ I GQ G QIG WE+ EHGI P G + + ++++ G+YV
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSEQQNEGGSFTTFFSDTGNGRYV 60
Query: 225 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 404
PR+I VDLEP +D +R+G + ++F P+ + G+ A NN+A+GHYT G EL+D+ LD +
Sbjct: 61 PRSIFVDLEPTVVDEIRTGNYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTTLDRI 120
Query: 405 RKEAESCDCLQG 440
R+ A++C LQG
Sbjct: 121 RRLADNCSGLQG 132
>U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha
protein 9 protein.
Length = 456
Score = 130 bits (314), Expect = 6e-31
Identities = 58/136 (42%), Positives = 87/136 (63%), Gaps = 2/136 (1%)
Frame = +3
Query: 39 NKMREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLE--RINVYYNEASG 212
N+ RE++ I GQ G Q+G WE+ EHGI P G + + L ++ N +++E
Sbjct: 4 NRSREVISIHVGQAGVQMGNACWELYCLEHGIQPDGMINEEDSLGVDDDSFNTFFSETMA 63
Query: 213 GKYVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSV 392
GK+VPRAI+VDLEP +D +R+G + +F P+ + G+ A NN+A+GHYT G E++D V
Sbjct: 64 GKHVPRAIMVDLEPTPIDEIRTGTYKTLFHPEQLLTGKEDAANNYARGHYTIGKEIIDVV 123
Query: 393 LDVVRKEAESCDCLQG 440
+D VR+ E+C LQG
Sbjct: 124 MDRVRRLVENCRGLQG 139
>Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical
protein F32H2.9 protein.
Length = 464
Score = 128 bits (310), Expect = 2e-30
Identities = 60/134 (44%), Positives = 86/134 (64%), Gaps = 3/134 (2%)
Frame = +3
Query: 48 REIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL---QLERINVYYNEASGGK 218
RE++ I GQ G QIG WE+ EHGI P G YH + D + E IN ++ E +GGK
Sbjct: 8 REVISIHVGQAGVQIGNACWELFCLEHGIQPDG-YHVEDDTYDEETETINTFFAETAGGK 66
Query: 219 YVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLD 398
+VPR + VDLEP +D VR+G + +F P+ + G+ A N +A+G YT G E++D V+D
Sbjct: 67 HVPRCLFVDLEPTVVDEVRTGTYRSLFHPEQLLSGKEDAANCYARGRYTIGREMIDVVMD 126
Query: 399 VVRKEAESCDCLQG 440
V++ AE+C+ LQG
Sbjct: 127 RVKRLAENCNGLQG 140
>U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin
MEC-12 protein.
Length = 450
Score = 128 bits (309), Expect = 2e-30
Identities = 56/134 (41%), Positives = 84/134 (62%), Gaps = 2/134 (1%)
Frame = +3
Query: 45 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGK 218
MRE++ I GQ G QIG WE+ EHGI P G D L + + +++E G+
Sbjct: 1 MREVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETGSGR 60
Query: 219 YVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLD 398
+VPRA++VDLEP +D +R+G + +F P+ + G+ A NN+A+GHYT G E++D LD
Sbjct: 61 HVPRAVMVDLEPTVIDEIRTGTYRSLFHPEQLITGKEDAANNYARGHYTIGKEIIDLTLD 120
Query: 399 VVRKEAESCDCLQG 440
+R+ A++C LQG
Sbjct: 121 RIRRLADNCTGLQG 134
>AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensory
abnormality protein12 protein.
Length = 450
Score = 128 bits (309), Expect = 2e-30
Identities = 56/134 (41%), Positives = 84/134 (62%), Gaps = 2/134 (1%)
Frame = +3
Query: 45 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGK 218
MRE++ I GQ G QIG WE+ EHGI P G D L + + +++E G+
Sbjct: 1 MREVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETGSGR 60
Query: 219 YVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLD 398
+VPRA++VDLEP +D +R+G + +F P+ + G+ A NN+A+GHYT G E++D LD
Sbjct: 61 HVPRAVMVDLEPTVIDEIRTGTYRSLFHPEQLITGKEDAANNYARGHYTIGKEIIDLTLD 120
Query: 399 VVRKEAESCDCLQG 440
+R+ A++C LQG
Sbjct: 121 RIRRLADNCTGLQG 134
>AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin
(tba-3) protein.
Length = 450
Score = 128 bits (309), Expect = 2e-30
Identities = 56/134 (41%), Positives = 84/134 (62%), Gaps = 2/134 (1%)
Frame = +3
Query: 45 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGK 218
MRE++ I GQ G QIG WE+ EHGI P G D L + + +++E G+
Sbjct: 1 MREVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETGSGR 60
Query: 219 YVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLD 398
+VPRA++VDLEP +D +R+G + +F P+ + G+ A NN+A+GHYT G E++D LD
Sbjct: 61 HVPRAVMVDLEPTVIDEIRTGTYRSLFHPEQLITGKEDAANNYARGHYTIGKEIIDLTLD 120
Query: 399 VVRKEAESCDCLQG 440
+R+ A++C LQG
Sbjct: 121 RIRRLADNCTGLQG 134
>D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin
protein.
Length = 449
Score = 126 bits (304), Expect = 9e-30
Identities = 55/133 (41%), Positives = 83/133 (62%), Gaps = 2/133 (1%)
Frame = +3
Query: 48 REIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGKY 221
RE++ I GQ G QIG WE+ EHGI P G D L + + +++E G++
Sbjct: 1 REVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETGSGRH 60
Query: 222 VPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDV 401
VPRA++VDLEP +D +R+G + +F P+ + G+ A NN+A+GHYT G E++D LD
Sbjct: 61 VPRAVMVDLEPTVIDEIRTGTYRSLFHPEQLITGKEDAANNYARGHYTIGKEIIDLTLDR 120
Query: 402 VRKEAESCDCLQG 440
+R+ A++C LQG
Sbjct: 121 IRRLADNCTGLQG 133
>Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical
protein T28D6.2 protein.
Length = 444
Score = 122 bits (294), Expect = 2e-28
Identities = 54/132 (40%), Positives = 84/132 (63%)
Frame = +3
Query: 45 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 224
MRE++ I GQ G QIG WE+ EHGI P G + D + ++++ G++V
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGILPDGTSM-EPDGNSGSLGTFFSDTGYGRHV 59
Query: 225 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 404
PR+I VDLEP +D +R+G + ++F P+ + G+ A NN+A+GHYT G E++D+ LD +
Sbjct: 60 PRSIFVDLEPTVVDEIRTGAYKKLFHPEQMLTGKEDAANNYARGHYTVGKEIIDTTLDRI 119
Query: 405 RKEAESCDCLQG 440
R+ A +C+ LQG
Sbjct: 120 RRLANNCEGLQG 131
>Z22179-11|CAA80164.1| 444|Caenorhabditis elegans Hypothetical
protein F58A4.8 protein.
Length = 444
Score = 106 bits (255), Expect = 8e-24
Identities = 51/133 (38%), Positives = 80/133 (60%), Gaps = 3/133 (2%)
Frame = +3
Query: 54 IVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYVPRA 233
++ + GQCGNQ+ FW+ + DEHGI+ G + D+ ++ ++Y +A YVPRA
Sbjct: 7 LMTVHVGQCGNQLAQAFWKSMVDEHGINERGQTTHEDDMNDKKDLLFY-QADDDHYVPRA 65
Query: 234 ILVDLEPGTMDSVRSGP-FGQIFRPDNFVFGQ--SGAGNNWAKGHYTEGAELVDSVLDVV 404
+LVDLEP ++ + P F +F DN GAGNNWA G Y +G E+ + ++D++
Sbjct: 66 VLVDLEPRVINGMMQSPNFSNLFNTDNIFMSDHGGGAGNNWASG-YCQGQEVQEKIMDII 124
Query: 405 RKEAESCDCLQGI 443
+EAE+ + L GI
Sbjct: 125 IREAENTNNLDGI 137
>AF287259-1|AAG24513.1| 444|Caenorhabditis elegans gamma-tubulin
protein.
Length = 444
Score = 106 bits (255), Expect = 8e-24
Identities = 51/133 (38%), Positives = 80/133 (60%), Gaps = 3/133 (2%)
Frame = +3
Query: 54 IVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYVPRA 233
++ + GQCGNQ+ FW+ + DEHGI+ G + D+ ++ ++Y +A YVPRA
Sbjct: 7 LMTVHVGQCGNQLAQAFWKSMVDEHGINERGQTTHEDDMNDKKDLLFY-QADDDHYVPRA 65
Query: 234 ILVDLEPGTMDSVRSGP-FGQIFRPDNFVFGQ--SGAGNNWAKGHYTEGAELVDSVLDVV 404
+LVDLEP ++ + P F +F DN GAGNNWA G Y +G E+ + ++D++
Sbjct: 66 VLVDLEPRVINGMMQSPNFSNLFNTDNIFMSDHGGGAGNNWASG-YCQGQEVQEKIMDII 124
Query: 405 RKEAESCDCLQGI 443
+EAE+ + L GI
Sbjct: 125 IREAENTNNLDGI 137
>AB017191-1|BAA32601.1| 435|Caenorhabditis elegans alpha tubulin
(tba-6) protein.
Length = 435
Score = 106 bits (254), Expect = 1e-23
Identities = 49/109 (44%), Positives = 72/109 (66%), Gaps = 3/109 (2%)
Frame = +3
Query: 123 EHGIDPTGAYHGDSDL---QLERINVYYNEASGGKYVPRAILVDLEPGTMDSVRSGPFGQ 293
EHGI P G YH + D + E IN ++ E +GGK+VPR + VDLEP +D VR+G +
Sbjct: 5 EHGIQPDG-YHVEDDTYDEETETINTFFAETAGGKHVPRCLFVDLEPTVVDEVRTGTYRS 63
Query: 294 IFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQG 440
+F P+ + G+ A N +A+G YT G E++D V+D V++ AE+C+ LQG
Sbjct: 64 LFHPEQLLSGKEDAANCYARGRYTIGREMIDVVMDRVKRLAENCNGLQG 112
>AF101312-1|AAC69221.3| 813|Caenorhabditis elegans Hypothetical
protein F56E10.2 protein.
Length = 813
Score = 28.7 bits (61), Expect = 2.6
Identities = 22/68 (32%), Positives = 28/68 (41%), Gaps = 5/68 (7%)
Frame = -3
Query: 427 SHDSASFRTTSKTESTSSAPSV*CPLAQLL-----PAPDCPKTKLSGRKICPKGPERTES 263
S A R + + S SS+PS CP LL PAP P + G PK +
Sbjct: 294 SDGRAGSRISLASTSASSSPSDPCPSPPLLPPVCPPAPPPPPPPIGGLTSPPKDALKNVP 353
Query: 262 MVPGSKST 239
PG+ T
Sbjct: 354 EPPGNMKT 361
>Z68750-3|CAA92964.2| 1092|Caenorhabditis elegans Hypothetical
protein K01A6.2 protein.
Length = 1092
Score = 27.9 bits (59), Expect = 4.5
Identities = 15/46 (32%), Positives = 21/46 (45%)
Frame = +3
Query: 111 IISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYVPRAILVDL 248
I S+ H I T + H DS R + GG + R IL+D+
Sbjct: 101 IASEHHHISTTSSCHSDSGNSSSRDVITPFTVHGGASIGRLILIDI 146
>AF038608-17|AAC25822.2| 425|Caenorhabditis elegans Hypothetical
protein C09G12.9 protein.
Length = 425
Score = 27.9 bits (59), Expect = 4.5
Identities = 18/65 (27%), Positives = 25/65 (38%)
Frame = -1
Query: 438 PGGNHTIPLPFERRLKLNRRAQHPPCSVPWPSCYXXXXXXXRSCPDGRSVRKVQSGQSPW 259
P T+P P+ + A +PP S P+PS + P SG SP+
Sbjct: 172 PSSQPTMPTPYPTG---SGAAPYPPSSTPYPSAGAMGYNPYMNVPQSTPYPMGASGASPY 228
Query: 258 CRAPS 244
A S
Sbjct: 229 PSASS 233
>Z73973-1|CAA98266.1| 357|Caenorhabditis elegans Hypothetical
protein F25D1.2 protein.
Length = 357
Score = 27.1 bits (57), Expect = 7.9
Identities = 15/53 (28%), Positives = 26/53 (49%)
Frame = -3
Query: 457 SVSVGXPWRQSHDSASFRTTSKTESTSSAPSV*CPLAQLLPAPDCPKTKLSGR 299
+VS+G P Q++ + F T ++ SV P+ QL+P + +S R
Sbjct: 204 NVSIGVPLMQTYSALIFTYYGMTTHSALLFSVFYPILQLIPVMVSTRVNISRR 256
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,677,478
Number of Sequences: 27780
Number of extensions: 218339
Number of successful extensions: 745
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 700
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 730
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 985905834
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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